Draft regulons reconstructed by automated conservative propagation
| Template (reference) regulons | Propagated regulons | |||||
|---|---|---|---|---|---|---|
| Regulog collection | Genomes | TF regulons | Taxonomic group | Genomes | TF regulons | |
| Lactobacillaceae | 15 | 485 | ➠ | Lactobacillales | 29 | 855 |
| * | - reference regulons from this genome have been used as a template for the conservative propagation |
Genomic distribution of propagated regulons
| Reference regulog | |||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AdcR | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
1
AdcR
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 |
- | - | - |
| AgaR2 | - |
1
AgaR2
Lactobacillus acidophilus NCFM |
- | - |
1
AgaR2
Lactobacillus casei BL23 |
1
AgaR2
Lactobacillus crispatus ST1 |
- | - | - |
2
AgaR2
Lactobacillus gasseri ATCC 33323 |
1
AgaR2
Lactobacillus helveticus DPC 4571 |
2
AgaR2
Lactobacillus johnsonii FI9785 |
2
AgaR2
Lactobacillus johnsonii NCC 533 |
1
AgaR2
Lactobacillus paracasei subsp. paracasei 8700:2 |
- | - | - | - | - |
1
AgaR2
Lactobacillus rhamnosus GG |
1
AgaR2
Lactobacillus rhamnosus HN001 |
1
AgaR2
Lactobacillus rhamnosus Lc 705 |
- | - | - | - | - | - |
1
AgaR2
Pediococcus pentosaceus ATCC 25745 |
| AguR | - | - |
1
AguR
Lactobacillus brevis ATCC 367 |
- | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
1
AguR
Lactobacillus sakei subsp. sakei 23K |
- | - | - | - | - |
1
AguR
Pediococcus pentosaceus ATCC 25745 |
| AraR | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
1
AraR
Lactobacillus plantarum JDM1 |
1
AraR
Lactobacillus plantarum WCFS1 |
- | - | - | - | - | - | - | - | - | - | - | - | - |
| ArgR |
7
ArgR
Carnobacterium sp. AT7 |
2
ArgR
Lactobacillus acidophilus NCFM |
1
ArgR
Lactobacillus brevis ATCC 367 |
4
ArgR
Lactobacillus casei ATCC 334 |
4
ArgR
Lactobacillus casei BL23 |
1
ArgR
Lactobacillus crispatus ST1 |
1
ArgR
Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842 |
1
ArgR
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 |
4
ArgR
Lactobacillus fermentum IFO 3956 |
2
ArgR
Lactobacillus gasseri ATCC 33323 |
1
ArgR
Lactobacillus helveticus DPC 4571 |
2
ArgR
Lactobacillus johnsonii FI9785 |
2
ArgR
Lactobacillus johnsonii NCC 533 |
4
ArgR
Lactobacillus paracasei subsp. paracasei 8700:2 |
4
ArgR
Lactobacillus plantarum JDM1 |
4
ArgR
Lactobacillus plantarum WCFS1 |
2
ArgR
Lactobacillus reuteri 100-23 |
5
ArgR
Lactobacillus reuteri DSM 20016 |
5
ArgR
Lactobacillus reuteri JCM 1112 |
4
ArgR
Lactobacillus rhamnosus GG |
4
ArgR
Lactobacillus rhamnosus HN001 |
4
ArgR
Lactobacillus rhamnosus Lc 705 |
2
ArgR
Lactobacillus sakei subsp. sakei 23K |
4
ArgR
Lactobacillus salivarius subsp. salivarius UCC118 |
7
ArgR
Leuconostoc citreum KM20 |
7
ArgR
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 |
2
ArgR
Oenococcus oeni ATCC BAA-1163 |
2
ArgR
Oenococcus oeni PSU-1 |
3
ArgR
Pediococcus pentosaceus ATCC 25745 |
| BfrR | - |
1
BfrR
Lactobacillus acidophilus NCFM |
- | - | - |
1
BfrR
Lactobacillus crispatus ST1 |
- | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| BirA | - | - | - | - | - | - | - | - |
1
BirA
Lactobacillus fermentum IFO 3956 |
- | - | - | - | - |
2
BirA
Lactobacillus plantarum JDM1 |
2
BirA
Lactobacillus plantarum WCFS1 |
1
BirA
Lactobacillus reuteri 100-23 |
1
BirA
Lactobacillus reuteri DSM 20016 |
1
BirA
Lactobacillus reuteri JCM 1112 |
- | - | - | - |
1
BirA
Lactobacillus salivarius subsp. salivarius UCC118 |
- |
2
BirA
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 |
1
BirA
Oenococcus oeni ATCC BAA-1163 |
1
BirA
Oenococcus oeni PSU-1 |
1
BirA
Pediococcus pentosaceus ATCC 25745 |
| BusR | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
2
BusR
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 |
- | - | - |
| CcpA |
17
CcpA
Carnobacterium sp. AT7 |
37
CcpA
Lactobacillus acidophilus NCFM |
32
CcpA
Lactobacillus brevis ATCC 367 |
32
CcpA
Lactobacillus casei ATCC 334 |
31
CcpA
Lactobacillus casei BL23 |
30
CcpA
Lactobacillus crispatus ST1 |
5
CcpA
Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842 |
5
CcpA
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 |
30
CcpA
Lactobacillus fermentum IFO 3956 |
28
CcpA
Lactobacillus gasseri ATCC 33323 |
18
CcpA
Lactobacillus helveticus DPC 4571 |
27
CcpA
Lactobacillus johnsonii FI9785 |
35
CcpA
Lactobacillus johnsonii NCC 533 |
31
CcpA
Lactobacillus paracasei subsp. paracasei 8700:2 |
53
CcpA
Lactobacillus plantarum JDM1 |
57
CcpA
Lactobacillus plantarum WCFS1 |
25
CcpA
Lactobacillus reuteri 100-23 |
31
CcpA
Lactobacillus reuteri DSM 20016 |
30
CcpA
Lactobacillus reuteri JCM 1112 |
31
CcpA
Lactobacillus rhamnosus GG |
35
CcpA
Lactobacillus rhamnosus HN001 |
32
CcpA
Lactobacillus rhamnosus Lc 705 |
33
CcpA
Lactobacillus sakei subsp. sakei 23K |
34
CcpA
Lactobacillus salivarius subsp. salivarius UCC118 |
24
CcpA
Leuconostoc citreum KM20 |
30
CcpA
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 |
12
CcpA
Oenococcus oeni ATCC BAA-1163 |
23
CcpA
Oenococcus oeni PSU-1 |
44
CcpA
Pediococcus pentosaceus ATCC 25745 |
| CcpB | - | - | - |
1
CcpB
Lactobacillus casei ATCC 334 |
1
CcpB
Lactobacillus casei BL23 |
- | - | - | - | - | - | - | - |
1
CcpB
Lactobacillus paracasei subsp. paracasei 8700:2 |
1
CcpB
Lactobacillus plantarum JDM1 |
1
CcpB
Lactobacillus plantarum WCFS1 |
- | - | - | - | - | - |
1
CcpB
Lactobacillus sakei subsp. sakei 23K |
- | - | - | - | - |
1
CcpB
Pediococcus pentosaceus ATCC 25745 |
| CcpN | - | - | - |
1
CcpN
Lactobacillus casei ATCC 334 |
1
CcpN
Lactobacillus casei BL23 |
- | - | - | - | - | - | - | - |
1
CcpN
Lactobacillus paracasei subsp. paracasei 8700:2 |
- | - | - | - | - |
1
CcpN
Lactobacillus rhamnosus GG |
1
CcpN
Lactobacillus rhamnosus HN001 |
- |
2
CcpN
Lactobacillus sakei subsp. sakei 23K |
- | - | - | - |
1
CcpN
Oenococcus oeni PSU-1 |
- |
| CelR | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
1
CelR
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 |
- | - | - |
| CggR | - |
1
CggR
Lactobacillus acidophilus NCFM |
1
CggR
Lactobacillus brevis ATCC 367 |
1
CggR
Lactobacillus casei ATCC 334 |
1
CggR
Lactobacillus casei BL23 |
1
CggR
Lactobacillus crispatus ST1 |
- |
1
CggR
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 |
- |
1
CggR
Lactobacillus gasseri ATCC 33323 |
1
CggR
Lactobacillus helveticus DPC 4571 |
1
CggR
Lactobacillus johnsonii FI9785 |
1
CggR
Lactobacillus johnsonii NCC 533 |
1
CggR
Lactobacillus paracasei subsp. paracasei 8700:2 |
1
CggR
Lactobacillus plantarum JDM1 |
1
CggR
Lactobacillus plantarum WCFS1 |
- | - | - |
1
CggR
Lactobacillus rhamnosus GG |
1
CggR
Lactobacillus rhamnosus HN001 |
1
CggR
Lactobacillus rhamnosus Lc 705 |
1
CggR
Lactobacillus sakei subsp. sakei 23K |
1
CggR
Lactobacillus salivarius subsp. salivarius UCC118 |
- | - | - | - |
1
CggR
Pediococcus pentosaceus ATCC 25745 |
| CopR | - |
1
CopR
Lactobacillus acidophilus NCFM |
2
CopR
Lactobacillus brevis ATCC 367 |
2
CopR
Lactobacillus casei ATCC 334 |
1
CopR
Lactobacillus casei BL23 |
1
CopR
Lactobacillus crispatus ST1 |
1
CopR
Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842 |
1
CopR
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 |
2
CopR
Lactobacillus fermentum IFO 3956 |
1
CopR
Lactobacillus gasseri ATCC 33323 |
2
CopR
Lactobacillus helveticus DPC 4571 |
1
CopR
Lactobacillus johnsonii FI9785 |
1
CopR
Lactobacillus johnsonii NCC 533 |
2
CopR
Lactobacillus paracasei subsp. paracasei 8700:2 |
3
CopR
Lactobacillus plantarum JDM1 |
2
CopR
Lactobacillus plantarum WCFS1 |
2
CopR
Lactobacillus reuteri 100-23 |
2
CopR
Lactobacillus reuteri DSM 20016 |
2
CopR
Lactobacillus reuteri JCM 1112 |
1
CopR
Lactobacillus rhamnosus GG |
1
CopR
Lactobacillus rhamnosus HN001 |
1
CopR
Lactobacillus rhamnosus Lc 705 |
- |
1
CopR
Lactobacillus salivarius subsp. salivarius UCC118 |
- |
1
CopR
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 |
2
CopR
Oenococcus oeni ATCC BAA-1163 |
1
CopR
Oenococcus oeni PSU-1 |
1
CopR
Pediococcus pentosaceus ATCC 25745 |
| CtsR |
1
CtsR
Carnobacterium sp. AT7 |
- |
1
CtsR
Lactobacillus brevis ATCC 367 |
1
CtsR
Lactobacillus casei ATCC 334 |
2
CtsR
Lactobacillus casei BL23 |
- | - | - |
1
CtsR
Lactobacillus fermentum IFO 3956 |
- | - | - | - |
2
CtsR
Lactobacillus paracasei subsp. paracasei 8700:2 |
2
CtsR
Lactobacillus plantarum JDM1 |
2
CtsR
Lactobacillus plantarum WCFS1 |
1
CtsR
Lactobacillus reuteri 100-23 |
2
CtsR
Lactobacillus reuteri DSM 20016 |
2
CtsR
Lactobacillus reuteri JCM 1112 |
2
CtsR
Lactobacillus rhamnosus GG |
2
CtsR
Lactobacillus rhamnosus HN001 |
2
CtsR
Lactobacillus rhamnosus Lc 705 |
3
CtsR
Lactobacillus sakei subsp. sakei 23K |
1
CtsR
Lactobacillus salivarius subsp. salivarius UCC118 |
- | - |
4
CtsR
Oenococcus oeni ATCC BAA-1163 |
4
CtsR
Oenococcus oeni PSU-1 |
2
CtsR
Pediococcus pentosaceus ATCC 25745 |
| CzcR1 | - | - | - | - | - | - |
2
CzcR1
Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842 |
2
CzcR1
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 |
- |
2
CzcR1
Lactobacillus gasseri ATCC 33323 |
- |
2
CzcR1
Lactobacillus johnsonii FI9785 |
2
CzcR1
Lactobacillus johnsonii NCC 533 |
- | - | - | - |
1
CzcR1
Lactobacillus reuteri DSM 20016 |
1
CzcR1
Lactobacillus reuteri JCM 1112 |
- | - | - | - | - | - | - | - | - | - |
| CzcR2 | - | - |
1
CzcR2
Lactobacillus brevis ATCC 367 |
- |
1
CzcR2
Lactobacillus casei BL23 |
- | - | - | - | - | - | - | - |
1
CzcR2
Lactobacillus paracasei subsp. paracasei 8700:2 |
- | - | - | - | - |
1
CzcR2
Lactobacillus rhamnosus GG |
1
CzcR2
Lactobacillus rhamnosus HN001 |
1
CzcR2
Lactobacillus rhamnosus Lc 705 |
- | - | - | - | - | - |
2
CzcR2
Pediococcus pentosaceus ATCC 25745 |
| DeoR | - | - |
1
DeoR
Lactobacillus brevis ATCC 367 |
- | - | - | - | - |
2
DeoR
Lactobacillus fermentum IFO 3956 |
- | - | - | - | - | - |
1
DeoR
Lactobacillus plantarum WCFS1 |
- |
2
DeoR
Lactobacillus reuteri DSM 20016 |
2
DeoR
Lactobacillus reuteri JCM 1112 |
- | - | - |
1
DeoR
Lactobacillus sakei subsp. sakei 23K |
- |
1
DeoR
Leuconostoc citreum KM20 |
- | - | - | - |
| ExuR | - | - |
1
ExuR
Lactobacillus brevis ATCC 367 |
- | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
1
ExuR
Lactobacillus sakei subsp. sakei 23K |
- | - | - | - | - | - |
| FabT | - | - |
1
FabT
Lactobacillus brevis ATCC 367 |
1
FabT
Lactobacillus casei ATCC 334 |
1
FabT
Lactobacillus casei BL23 |
- | - | - |
1
FabT
Lactobacillus fermentum IFO 3956 |
- |
1
FabT
Lactobacillus helveticus DPC 4571 |
- | - |
1
FabT
Lactobacillus paracasei subsp. paracasei 8700:2 |
- | - |
2
FabT
Lactobacillus reuteri 100-23 |
2
FabT
Lactobacillus reuteri DSM 20016 |
2
FabT
Lactobacillus reuteri JCM 1112 |
2
FabT
Lactobacillus rhamnosus GG |
2
FabT
Lactobacillus rhamnosus HN001 |
2
FabT
Lactobacillus rhamnosus Lc 705 |
- |
1
FabT
Lactobacillus salivarius subsp. salivarius UCC118 |
- |
1
FabT
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 |
- | - | - |
| FatR | - | - | - |
1
FatR
Lactobacillus casei ATCC 334 |
1
FatR
Lactobacillus casei BL23 |
- | - | - | - | - | - | - | - |
1
FatR
Lactobacillus paracasei subsp. paracasei 8700:2 |
- | - | - | - | - |
1
FatR
Lactobacillus rhamnosus GG |
1
FatR
Lactobacillus rhamnosus HN001 |
1
FatR
Lactobacillus rhamnosus Lc 705 |
- | - | - | - |
1
FatR
Oenococcus oeni ATCC BAA-1163 |
3
FatR
Oenococcus oeni PSU-1 |
- |
| FlpA |
2
FlpA
Carnobacterium sp. AT7 |
1
FlpA
Lactobacillus acidophilus NCFM |
2
FlpA
Lactobacillus brevis ATCC 367 |
- |
1
FlpA
Lactobacillus casei BL23 |
2
FlpA
Lactobacillus crispatus ST1 |
1
FlpA
Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842 |
- |
2
FlpA
Lactobacillus fermentum IFO 3956 |
2
FlpA
Lactobacillus gasseri ATCC 33323 |
- |
1
FlpA
Lactobacillus johnsonii FI9785 |
1
FlpA
Lactobacillus johnsonii NCC 533 |
- |
4
FlpA
Lactobacillus plantarum JDM1 |
4
FlpA
Lactobacillus plantarum WCFS1 |
2
FlpA
Lactobacillus reuteri 100-23 |
1
FlpA
Lactobacillus reuteri DSM 20016 |
1
FlpA
Lactobacillus reuteri JCM 1112 |
1
FlpA
Lactobacillus rhamnosus GG |
2
FlpA
Lactobacillus rhamnosus HN001 |
1
FlpA
Lactobacillus rhamnosus Lc 705 |
1
FlpA
Lactobacillus sakei subsp. sakei 23K |
4
FlpA
Lactobacillus salivarius subsp. salivarius UCC118 |
2
FlpA
Leuconostoc citreum KM20 |
1
FlpA
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 |
- |
3
FlpA
Oenococcus oeni PSU-1 |
2
FlpA
Pediococcus pentosaceus ATCC 25745 |
| FlrR | - | - |
2
FlrR
Lactobacillus brevis ATCC 367 |
- | - | - | - | - | - | - | - | - | - | - |
2
FlrR
Lactobacillus plantarum JDM1 |
2
FlrR
Lactobacillus plantarum WCFS1 |
- | - | - | - | - | - |
2
FlrR
Lactobacillus sakei subsp. sakei 23K |
- | - | - | - | - | - |
| FruR |
2
FruR
Carnobacterium sp. AT7 |
1
FruR
Lactobacillus acidophilus NCFM |
- |
1
FruR
Lactobacillus casei ATCC 334 |
1
FruR
Lactobacillus casei BL23 |
1
FruR
Lactobacillus crispatus ST1 |
1
FruR
Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842 |
1
FruR
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 |
- |
1
FruR
Lactobacillus gasseri ATCC 33323 |
1
FruR
Lactobacillus helveticus DPC 4571 |
1
FruR
Lactobacillus johnsonii FI9785 |
1
FruR
Lactobacillus johnsonii NCC 533 |
1
FruR
Lactobacillus paracasei subsp. paracasei 8700:2 |
1
FruR
Lactobacillus plantarum JDM1 |
1
FruR
Lactobacillus plantarum WCFS1 |
- | - | - |
1
FruR
Lactobacillus rhamnosus GG |
1
FruR
Lactobacillus rhamnosus HN001 |
1
FruR
Lactobacillus rhamnosus Lc 705 |
1
FruR
Lactobacillus sakei subsp. sakei 23K |
1
FruR
Lactobacillus salivarius subsp. salivarius UCC118 |
- | - | - | - |
1
FruR
Pediococcus pentosaceus ATCC 25745 |
| FucR | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
1
FucR
Lactobacillus rhamnosus HN001 |
- | - | - | - | - | - | - | - |
| GalR | - | - |
3
GalR
Lactobacillus brevis ATCC 367 |
1
GalR
Lactobacillus casei ATCC 334 |
1
GalR
Lactobacillus casei BL23 |
1
GalR
Lactobacillus crispatus ST1 |
- | - |
1
GalR
Lactobacillus fermentum IFO 3956 |
1
GalR
Lactobacillus gasseri ATCC 33323 |
- |
1
GalR
Lactobacillus johnsonii FI9785 |
1
GalR
Lactobacillus johnsonii NCC 533 |
1
GalR
Lactobacillus paracasei subsp. paracasei 8700:2 |
3
GalR
Lactobacillus plantarum JDM1 |
3
GalR
Lactobacillus plantarum WCFS1 |
2
GalR
Lactobacillus reuteri 100-23 |
4
GalR
Lactobacillus reuteri DSM 20016 |
4
GalR
Lactobacillus reuteri JCM 1112 |
1
GalR
Lactobacillus rhamnosus GG |
- |
2
GalR
Lactobacillus rhamnosus Lc 705 |
3
GalR
Lactobacillus sakei subsp. sakei 23K |
3
GalR
Lactobacillus salivarius subsp. salivarius UCC118 |
1
GalR
Leuconostoc citreum KM20 |
1
GalR
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 |
1
GalR
Oenococcus oeni ATCC BAA-1163 |
1
GalR
Oenococcus oeni PSU-1 |
5
GalR
Pediococcus pentosaceus ATCC 25745 |
| GlnR |
1
GlnR
Carnobacterium sp. AT7 |
1
GlnR
Lactobacillus acidophilus NCFM |
3
GlnR
Lactobacillus brevis ATCC 367 |
4
GlnR
Lactobacillus casei ATCC 334 |
3
GlnR
Lactobacillus casei BL23 |
- | - | - | - | - |
1
GlnR
Lactobacillus helveticus DPC 4571 |
- | - |
4
GlnR
Lactobacillus paracasei subsp. paracasei 8700:2 |
4
GlnR
Lactobacillus plantarum JDM1 |
4
GlnR
Lactobacillus plantarum WCFS1 |
- | - | - |
4
GlnR
Lactobacillus rhamnosus GG |
4
GlnR
Lactobacillus rhamnosus HN001 |
4
GlnR
Lactobacillus rhamnosus Lc 705 |
1
GlnR
Lactobacillus sakei subsp. sakei 23K |
5
GlnR
Lactobacillus salivarius subsp. salivarius UCC118 |
3
GlnR
Leuconostoc citreum KM20 |
4
GlnR
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 |
2
GlnR
Oenococcus oeni ATCC BAA-1163 |
2
GlnR
Oenococcus oeni PSU-1 |
1
GlnR
Pediococcus pentosaceus ATCC 25745 |
| GntR1 | - | - |
4
GntR1
Lactobacillus brevis ATCC 367 |
2
GntR1
Lactobacillus casei ATCC 334 |
2
GntR1
Lactobacillus casei BL23 |
- | - | - | - | - | - | - | - |
2
GntR1
Lactobacillus paracasei subsp. paracasei 8700:2 |
1
GntR1
Lactobacillus plantarum JDM1 |
1
GntR1
Lactobacillus plantarum WCFS1 |
- | - | - |
2
GntR1
Lactobacillus rhamnosus GG |
2
GntR1
Lactobacillus rhamnosus HN001 |
2
GntR1
Lactobacillus rhamnosus Lc 705 |
2
GntR1
Lactobacillus sakei subsp. sakei 23K |
- |
2
GntR1
Leuconostoc citreum KM20 |
2
GntR1
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 |
2
GntR1
Oenococcus oeni ATCC BAA-1163 |
2
GntR1
Oenococcus oeni PSU-1 |
2
GntR1
Pediococcus pentosaceus ATCC 25745 |
| GntR2 | - | - | - | - | - | - | - | - |
1
GntR2
Lactobacillus fermentum IFO 3956 |
- | - | - | - | - | - | - | - |
1
GntR2
Lactobacillus reuteri DSM 20016 |
1
GntR2
Lactobacillus reuteri JCM 1112 |
- | - | - | - | - | - | - | - | - | - |
| GutR | - | - | - |
1
GutR
Lactobacillus casei ATCC 334 |
- | - | - | - | - | - | - | - | - | - |
1
GutR
Lactobacillus plantarum JDM1 |
2
GutR
Lactobacillus plantarum WCFS1 |
- | - | - |
1
GutR
Lactobacillus rhamnosus GG |
1
GutR
Lactobacillus rhamnosus HN001 |
1
GutR
Lactobacillus rhamnosus Lc 705 |
- |
1
GutR
Lactobacillus salivarius subsp. salivarius UCC118 |
- | - | - | - | - |
| HrcA |
1
HrcA
Carnobacterium sp. AT7 |
6
HrcA
Lactobacillus acidophilus NCFM |
3
HrcA
Lactobacillus brevis ATCC 367 |
6
HrcA
Lactobacillus casei ATCC 334 |
6
HrcA
Lactobacillus casei BL23 |
6
HrcA
Lactobacillus crispatus ST1 |
5
HrcA
Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842 |
5
HrcA
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 |
2
HrcA
Lactobacillus fermentum IFO 3956 |
6
HrcA
Lactobacillus gasseri ATCC 33323 |
5
HrcA
Lactobacillus helveticus DPC 4571 |
6
HrcA
Lactobacillus johnsonii FI9785 |
6
HrcA
Lactobacillus johnsonii NCC 533 |
6
HrcA
Lactobacillus paracasei subsp. paracasei 8700:2 |
2
HrcA
Lactobacillus plantarum JDM1 |
2
HrcA
Lactobacillus plantarum WCFS1 |
3
HrcA
Lactobacillus reuteri 100-23 |
4
HrcA
Lactobacillus reuteri DSM 20016 |
4
HrcA
Lactobacillus reuteri JCM 1112 |
6
HrcA
Lactobacillus rhamnosus GG |
5
HrcA
Lactobacillus rhamnosus HN001 |
4
HrcA
Lactobacillus rhamnosus Lc 705 |
3
HrcA
Lactobacillus sakei subsp. sakei 23K |
2
HrcA
Lactobacillus salivarius subsp. salivarius UCC118 |
3
HrcA
Leuconostoc citreum KM20 |
4
HrcA
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 |
- | - |
3
HrcA
Pediococcus pentosaceus ATCC 25745 |
| HxlR | - | - |
1
HxlR
Lactobacillus brevis ATCC 367 |
- | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
1
HxlR
Oenococcus oeni ATCC BAA-1163 |
1
HxlR
Oenococcus oeni PSU-1 |
- |
| IolR | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
1
IolR
Lactobacillus rhamnosus GG |
1
IolR
Lactobacillus rhamnosus HN001 |
1
IolR
Lactobacillus rhamnosus Lc 705 |
- | - | - | - | - | - | - |
| LBA0573 | - |
1
LBA0573
Lactobacillus acidophilus NCFM |
- | - | - | - | - |
1
LBA0573
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 |
- |
1
LBA0573
Lactobacillus gasseri ATCC 33323 |
1
LBA0573
Lactobacillus helveticus DPC 4571 |
1
LBA0573
Lactobacillus johnsonii FI9785 |
- | - | - | - | - | - | - | - | - | - | - |
1
LBA0573
Lactobacillus salivarius subsp. salivarius UCC118 |
- | - | - | - | - |
| LBA1472 | - |
2
LBA1472
Lactobacillus acidophilus NCFM |
- | - | - |
1
LBA1472
Lactobacillus crispatus ST1 |
- | - | - | - | - | - |
1
LBA1472
Lactobacillus johnsonii NCC 533 |
- | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| LBA1638 | - |
1
LBA1638
Lactobacillus acidophilus NCFM |
- |
1
LBA1638
Lactobacillus casei ATCC 334 |
1
LBA1638
Lactobacillus casei BL23 |
1
LBA1638
Lactobacillus crispatus ST1 |
1
LBA1638
Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842 |
1
LBA1638
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 |
- |
1
LBA1638
Lactobacillus gasseri ATCC 33323 |
1
LBA1638
Lactobacillus helveticus DPC 4571 |
1
LBA1638
Lactobacillus johnsonii FI9785 |
1
LBA1638
Lactobacillus johnsonii NCC 533 |
1
LBA1638
Lactobacillus paracasei subsp. paracasei 8700:2 |
- | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| LJ1265 | - |
2
LJ1265
Lactobacillus acidophilus NCFM |
- | - | - | - | - | - | - | - | - | - |
2
LJ1265
Lactobacillus johnsonii NCC 533 |
- | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| LSEI_0081 | - | - | - |
2
LSEI_0081
Lactobacillus casei ATCC 334 |
2
LSEI_0081
Lactobacillus casei BL23 |
- | - | - | - | - | - | - | - |
2
LSEI_0081
Lactobacillus paracasei subsp. paracasei 8700:2 |
- | - | - | - | - |
2
LSEI_0081
Lactobacillus rhamnosus GG |
2
LSEI_0081
Lactobacillus rhamnosus HN001 |
2
LSEI_0081
Lactobacillus rhamnosus Lc 705 |
- | - | - | - |
1
LSEI_0081
Oenococcus oeni ATCC BAA-1163 |
2
LSEI_0081
Oenococcus oeni PSU-1 |
- |
| LSEI_0368 | - | - | - |
2
LSEI_0368
Lactobacillus casei ATCC 334 |
- | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
2
LSEI_0368
Lactobacillus rhamnosus GG |
- | - | - | - | - | - | - | - | - |
| LacR | - | - | - |
1
LacR
Lactobacillus casei ATCC 334 |
1
LacR
Lactobacillus casei BL23 |
- | - | - | - | - | - | - | - |
1
LacR
Lactobacillus paracasei subsp. paracasei 8700:2 |
- | - | - | - | - |
1
LacR
Lactobacillus rhamnosus GG |
1
LacR
Lactobacillus rhamnosus HN001 |
1
LacR
Lactobacillus rhamnosus Lc 705 |
- | - | - | - | - | - | - |
| LacR | - |
1
LacR
Lactobacillus acidophilus NCFM |
- | - | - |
1
LacR
Lactobacillus crispatus ST1 |
- | - |
2
LacR
Lactobacillus fermentum IFO 3956 |
1
LacR
Lactobacillus gasseri ATCC 33323 |
1
LacR
Lactobacillus helveticus DPC 4571 |
- |
2
LacR
Lactobacillus johnsonii NCC 533 |
- |
2
LacR
Lactobacillus plantarum JDM1 |
2
LacR
Lactobacillus plantarum WCFS1 |
- |
1
LacR
Lactobacillus reuteri DSM 20016 |
1
LacR
Lactobacillus reuteri JCM 1112 |
- | - | - | - | - | - |
2
LacR
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 |
- | - | - |
| LexA |
3
LexA
Carnobacterium sp. AT7 |
4
LexA
Lactobacillus acidophilus NCFM |
8
LexA
Lactobacillus brevis ATCC 367 |
9
LexA
Lactobacillus casei ATCC 334 |
8
LexA
Lactobacillus casei BL23 |
4
LexA
Lactobacillus crispatus ST1 |
3
LexA
Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842 |
4
LexA
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 |
6
LexA
Lactobacillus fermentum IFO 3956 |
5
LexA
Lactobacillus gasseri ATCC 33323 |
5
LexA
Lactobacillus helveticus DPC 4571 |
5
LexA
Lactobacillus johnsonii FI9785 |
5
LexA
Lactobacillus johnsonii NCC 533 |
8
LexA
Lactobacillus paracasei subsp. paracasei 8700:2 |
9
LexA
Lactobacillus plantarum JDM1 |
9
LexA
Lactobacillus plantarum WCFS1 |
3
LexA
Lactobacillus reuteri 100-23 |
6
LexA
Lactobacillus reuteri DSM 20016 |
6
LexA
Lactobacillus reuteri JCM 1112 |
8
LexA
Lactobacillus rhamnosus GG |
8
LexA
Lactobacillus rhamnosus HN001 |
8
LexA
Lactobacillus rhamnosus Lc 705 |
6
LexA
Lactobacillus sakei subsp. sakei 23K |
4
LexA
Lactobacillus salivarius subsp. salivarius UCC118 |
7
LexA
Leuconostoc citreum KM20 |
9
LexA
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 |
5
LexA
Oenococcus oeni ATCC BAA-1163 |
7
LexA
Oenococcus oeni PSU-1 |
6
LexA
Pediococcus pentosaceus ATCC 25745 |
| Lp_2742 | - | - |
1
Lp_2742
Lactobacillus brevis ATCC 367 |
- | - | - | - | - |
1
Lp_2742
Lactobacillus fermentum IFO 3956 |
- | - | - | - | - |
1
Lp_2742
Lactobacillus plantarum JDM1 |
1
Lp_2742
Lactobacillus plantarum WCFS1 |
- |
1
Lp_2742
Lactobacillus reuteri DSM 20016 |
1
Lp_2742
Lactobacillus reuteri JCM 1112 |
- | - | - | - |
1
Lp_2742
Lactobacillus salivarius subsp. salivarius UCC118 |
- | - | - | - |
2
Lp_2742
Pediococcus pentosaceus ATCC 25745 |
| Lp_3221 | - | - | - |
2
Lp_3221
Lactobacillus casei ATCC 334 |
2
Lp_3221
Lactobacillus casei BL23 |
- | - | - | - | - | - | - | - |
2
Lp_3221
Lactobacillus paracasei subsp. paracasei 8700:2 |
2
Lp_3221
Lactobacillus plantarum JDM1 |
1
Lp_3221
Lactobacillus plantarum WCFS1 |
- | - | - |
2
Lp_3221
Lactobacillus rhamnosus GG |
2
Lp_3221
Lactobacillus rhamnosus HN001 |
2
Lp_3221
Lactobacillus rhamnosus Lc 705 |
- | - | - | - | - | - | - |
| MalR | - | - |
1
MalR
Lactobacillus brevis ATCC 367 |
- | - | - | - | - |
1
MalR
Lactobacillus fermentum IFO 3956 |
- | - | - | - | - |
3
MalR
Lactobacillus plantarum JDM1 |
3
MalR
Lactobacillus plantarum WCFS1 |
1
MalR
Lactobacillus reuteri 100-23 |
1
MalR
Lactobacillus reuteri DSM 20016 |
1
MalR
Lactobacillus reuteri JCM 1112 |
- | - | - | - |
1
MalR
Lactobacillus salivarius subsp. salivarius UCC118 |
1
MalR
Leuconostoc citreum KM20 |
2
MalR
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 |
- | - |
1
MalR
Pediococcus pentosaceus ATCC 25745 |
| MalR3 | - | - |
2
MalR3
Lactobacillus brevis ATCC 367 |
- | - | - | - | - |
1
MalR3
Lactobacillus fermentum IFO 3956 |
- | - | - | - | - |
4
MalR3
Lactobacillus plantarum JDM1 |
4
MalR3
Lactobacillus plantarum WCFS1 |
1
MalR3
Lactobacillus reuteri 100-23 |
2
MalR3
Lactobacillus reuteri DSM 20016 |
2
MalR3
Lactobacillus reuteri JCM 1112 |
- |
1
MalR3
Lactobacillus rhamnosus HN001 |
1
MalR3
Lactobacillus rhamnosus Lc 705 |
- | - | - |
4
MalR3
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 |
2
MalR3
Oenococcus oeni ATCC BAA-1163 |
2
MalR3
Oenococcus oeni PSU-1 |
- |
| MdxR | - |
2
MdxR
Lactobacillus acidophilus NCFM |
- |
2
MdxR
Lactobacillus casei ATCC 334 |
2
MdxR
Lactobacillus casei BL23 |
1
MdxR
Lactobacillus crispatus ST1 |
- | - | - |
2
MdxR
Lactobacillus gasseri ATCC 33323 |
1
MdxR
Lactobacillus helveticus DPC 4571 |
2
MdxR
Lactobacillus johnsonii FI9785 |
2
MdxR
Lactobacillus johnsonii NCC 533 |
2
MdxR
Lactobacillus paracasei subsp. paracasei 8700:2 |
2
MdxR
Lactobacillus plantarum JDM1 |
2
MdxR
Lactobacillus plantarum WCFS1 |
- | - | - | - | - | - | - | - |
1
MdxR
Leuconostoc citreum KM20 |
2
MdxR
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 |
- | - | - |
| MleR | - | - |
2
MleR
Lactobacillus brevis ATCC 367 |
1
MleR
Lactobacillus casei ATCC 334 |
1
MleR
Lactobacillus casei BL23 |
- | - | - | - | - | - | - | - |
1
MleR
Lactobacillus paracasei subsp. paracasei 8700:2 |
2
MleR
Lactobacillus plantarum JDM1 |
2
MleR
Lactobacillus plantarum WCFS1 |
2
MleR
Lactobacillus reuteri 100-23 |
2
MleR
Lactobacillus reuteri DSM 20016 |
2
MleR
Lactobacillus reuteri JCM 1112 |
2
MleR
Lactobacillus rhamnosus GG |
2
MleR
Lactobacillus rhamnosus HN001 |
1
MleR
Lactobacillus rhamnosus Lc 705 |
2
MleR
Lactobacillus sakei subsp. sakei 23K |
2
MleR
Lactobacillus salivarius subsp. salivarius UCC118 |
- |
2
MleR
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 |
1
MleR
Oenococcus oeni ATCC BAA-1163 |
1
MleR
Oenococcus oeni PSU-1 |
2
MleR
Pediococcus pentosaceus ATCC 25745 |
| MntR | - | - |
2
MntR
Lactobacillus brevis ATCC 367 |
2
MntR
Lactobacillus casei ATCC 334 |
2
MntR
Lactobacillus casei BL23 |
- | - | - |
1
MntR
Lactobacillus fermentum IFO 3956 |
- | - | - | - |
2
MntR
Lactobacillus paracasei subsp. paracasei 8700:2 |
2
MntR
Lactobacillus plantarum JDM1 |
2
MntR
Lactobacillus plantarum WCFS1 |
1
MntR
Lactobacillus reuteri 100-23 |
1
MntR
Lactobacillus reuteri DSM 20016 |
1
MntR
Lactobacillus reuteri JCM 1112 |
2
MntR
Lactobacillus rhamnosus GG |
2
MntR
Lactobacillus rhamnosus HN001 |
2
MntR
Lactobacillus rhamnosus Lc 705 |
3
MntR
Lactobacillus sakei subsp. sakei 23K |
1
MntR
Lactobacillus salivarius subsp. salivarius UCC118 |
- | - | - | - | - |
| MtaR | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
2
MtaR
Lactobacillus plantarum JDM1 |
2
MtaR
Lactobacillus plantarum WCFS1 |
- | - | - | - | - | - | - | - | - | - | - | - | - |
| MtlR | - | - | - |
1
MtlR
Lactobacillus casei ATCC 334 |
1
MtlR
Lactobacillus casei BL23 |
- | - | - | - | - | - | - | - |
1
MtlR
Lactobacillus paracasei subsp. paracasei 8700:2 |
1
MtlR
Lactobacillus plantarum JDM1 |
1
MtlR
Lactobacillus plantarum WCFS1 |
- | - | - |
1
MtlR
Lactobacillus rhamnosus GG |
1
MtlR
Lactobacillus rhamnosus HN001 |
1
MtlR
Lactobacillus rhamnosus Lc 705 |
- |
1
MtlR
Lactobacillus salivarius subsp. salivarius UCC118 |
- | - | - | - | - |
| MurR |
1
MurR
Carnobacterium sp. AT7 |
1
MurR
Lactobacillus acidophilus NCFM |
- | - | - | - | - | - | - | - | - | - |
1
MurR
Lactobacillus johnsonii NCC 533 |
- |
1
MurR
Lactobacillus plantarum JDM1 |
1
MurR
Lactobacillus plantarum WCFS1 |
- | - | - | - | - | - | - | - | - | - | - | - |
1
MurR
Pediococcus pentosaceus ATCC 25745 |
| NagR |
2
NagR
Carnobacterium sp. AT7 |
2
NagR
Lactobacillus acidophilus NCFM |
3
NagR
Lactobacillus brevis ATCC 367 |
3
NagR
Lactobacillus casei ATCC 334 |
3
NagR
Lactobacillus casei BL23 |
2
NagR
Lactobacillus crispatus ST1 |
2
NagR
Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842 |
2
NagR
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 |
1
NagR
Lactobacillus fermentum IFO 3956 |
2
NagR
Lactobacillus gasseri ATCC 33323 |
2
NagR
Lactobacillus helveticus DPC 4571 |
2
NagR
Lactobacillus johnsonii FI9785 |
2
NagR
Lactobacillus johnsonii NCC 533 |
3
NagR
Lactobacillus paracasei subsp. paracasei 8700:2 |
4
NagR
Lactobacillus plantarum JDM1 |
4
NagR
Lactobacillus plantarum WCFS1 |
1
NagR
Lactobacillus reuteri 100-23 |
1
NagR
Lactobacillus reuteri DSM 20016 |
1
NagR
Lactobacillus reuteri JCM 1112 |
2
NagR
Lactobacillus rhamnosus GG |
2
NagR
Lactobacillus rhamnosus HN001 |
2
NagR
Lactobacillus rhamnosus Lc 705 |
4
NagR
Lactobacillus sakei subsp. sakei 23K |
3
NagR
Lactobacillus salivarius subsp. salivarius UCC118 |
2
NagR
Leuconostoc citreum KM20 |
2
NagR
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 |
1
NagR
Oenococcus oeni ATCC BAA-1163 |
1
NagR
Oenococcus oeni PSU-1 |
4
NagR
Pediococcus pentosaceus ATCC 25745 |
| NiaR | - | - | - |
1
NiaR
Lactobacillus casei ATCC 334 |
- | - | - | - | - | - | - | - | - | - |
2
NiaR
Lactobacillus plantarum JDM1 |
2
NiaR
Lactobacillus plantarum WCFS1 |
- | - | - |
1
NiaR
Lactobacillus rhamnosus GG |
1
NiaR
Lactobacillus rhamnosus HN001 |
1
NiaR
Lactobacillus rhamnosus Lc 705 |
- | - | - | - | - | - |
2
NiaR
Pediococcus pentosaceus ATCC 25745 |
| NigR | - | - | - | - | - | - | - | - | - |
1
NigR
Lactobacillus gasseri ATCC 33323 |
- | - |
1
NigR
Lactobacillus johnsonii NCC 533 |
- | - | - | - | - | - | - | - | - | - |
1
NigR
Lactobacillus salivarius subsp. salivarius UCC118 |
- | - | - | - | - |
| NihR | - | - |
2
NihR
Lactobacillus brevis ATCC 367 |
- | - | - | - | - |
2
NihR
Lactobacillus fermentum IFO 3956 |
- | - |
1
NihR
Lactobacillus johnsonii FI9785 |
- | - |
2
NihR
Lactobacillus plantarum JDM1 |
2
NihR
Lactobacillus plantarum WCFS1 |
- | - | - | - | - | - |
3
NihR
Lactobacillus sakei subsp. sakei 23K |
- | - | - | - | - |
2
NihR
Pediococcus pentosaceus ATCC 25745 |
| NrdR |
2
NrdR
Carnobacterium sp. AT7 |
4
NrdR
Lactobacillus acidophilus NCFM |
5
NrdR
Lactobacillus brevis ATCC 367 |
5
NrdR
Lactobacillus casei ATCC 334 |
5
NrdR
Lactobacillus casei BL23 |
3
NrdR
Lactobacillus crispatus ST1 |
3
NrdR
Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842 |
3
NrdR
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 |
2
NrdR
Lactobacillus fermentum IFO 3956 |
4
NrdR
Lactobacillus gasseri ATCC 33323 |
4
NrdR
Lactobacillus helveticus DPC 4571 |
3
NrdR
Lactobacillus johnsonii FI9785 |
3
NrdR
Lactobacillus johnsonii NCC 533 |
5
NrdR
Lactobacillus paracasei subsp. paracasei 8700:2 |
4
NrdR
Lactobacillus plantarum JDM1 |
4
NrdR
Lactobacillus plantarum WCFS1 |
4
NrdR
Lactobacillus reuteri 100-23 |
4
NrdR
Lactobacillus reuteri DSM 20016 |
4
NrdR
Lactobacillus reuteri JCM 1112 |
5
NrdR
Lactobacillus rhamnosus GG |
5
NrdR
Lactobacillus rhamnosus HN001 |
4
NrdR
Lactobacillus rhamnosus Lc 705 |
3
NrdR
Lactobacillus sakei subsp. sakei 23K |
2
NrdR
Lactobacillus salivarius subsp. salivarius UCC118 |
- | - | - | - |
4
NrdR
Pediococcus pentosaceus ATCC 25745 |
| NrtR | - | - | - |
1
NrtR
Lactobacillus casei ATCC 334 |
1
NrtR
Lactobacillus casei BL23 |
- |
1
NrtR
Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842 |
1
NrtR
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 |
1
NrtR
Lactobacillus fermentum IFO 3956 |
- |
1
NrtR
Lactobacillus helveticus DPC 4571 |
1
NrtR
Lactobacillus johnsonii FI9785 |
- |
1
NrtR
Lactobacillus paracasei subsp. paracasei 8700:2 |
1
NrtR
Lactobacillus plantarum JDM1 |
1
NrtR
Lactobacillus plantarum WCFS1 |
- |
1
NrtR
Lactobacillus reuteri DSM 20016 |
1
NrtR
Lactobacillus reuteri JCM 1112 |
1
NrtR
Lactobacillus rhamnosus GG |
1
NrtR
Lactobacillus rhamnosus HN001 |
1
NrtR
Lactobacillus rhamnosus Lc 705 |
- | - |
1
NrtR
Leuconostoc citreum KM20 |
1
NrtR
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 |
- | - | - |
| OglR2 | - | - | - |
1
OglR2
Lactobacillus casei ATCC 334 |
1
OglR2
Lactobacillus casei BL23 |
- | - | - | - | - | - | - | - |
1
OglR2
Lactobacillus paracasei subsp. paracasei 8700:2 |
- | - | - | - | - | - | - |
1
OglR2
Lactobacillus rhamnosus Lc 705 |
- | - | - | - | - | - | - |
| PadR | - | - |
2
PadR
Lactobacillus brevis ATCC 367 |
- | - | - | - | - | - | - | - | - | - | - |
2
PadR
Lactobacillus plantarum JDM1 |
2
PadR
Lactobacillus plantarum WCFS1 |
- | - | - | - | - | - |
1
PadR
Lactobacillus sakei subsp. sakei 23K |
- | - | - | - | - |
1
PadR
Pediococcus pentosaceus ATCC 25745 |
| PerR | - | - |
6
PerR
Lactobacillus brevis ATCC 367 |
5
PerR
Lactobacillus casei ATCC 334 |
5
PerR
Lactobacillus casei BL23 |
- | - | - |
4
PerR
Lactobacillus fermentum IFO 3956 |
1
PerR
Lactobacillus gasseri ATCC 33323 |
- | - | - |
5
PerR
Lactobacillus paracasei subsp. paracasei 8700:2 |
6
PerR
Lactobacillus plantarum JDM1 |
6
PerR
Lactobacillus plantarum WCFS1 |
3
PerR
Lactobacillus reuteri 100-23 |
4
PerR
Lactobacillus reuteri DSM 20016 |
4
PerR
Lactobacillus reuteri JCM 1112 |
5
PerR
Lactobacillus rhamnosus GG |
5
PerR
Lactobacillus rhamnosus HN001 |
5
PerR
Lactobacillus rhamnosus Lc 705 |
4
PerR
Lactobacillus sakei subsp. sakei 23K |
4
PerR
Lactobacillus salivarius subsp. salivarius UCC118 |
3
PerR
Leuconostoc citreum KM20 |
4
PerR
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 |
- | - |
2
PerR
Pediococcus pentosaceus ATCC 25745 |
| PflR | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
1
PflR
Lactobacillus plantarum JDM1 |
3
PflR
Lactobacillus plantarum WCFS1 |
- | - | - | - | - | - | - | - | - | - | - | - | - |
| PurR |
3
PurR
Carnobacterium sp. AT7 |
7
PurR
Lactobacillus acidophilus NCFM |
4
PurR
Lactobacillus brevis ATCC 367 |
6
PurR
Lactobacillus casei ATCC 334 |
6
PurR
Lactobacillus casei BL23 |
5
PurR
Lactobacillus crispatus ST1 |
6
PurR
Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842 |
5
PurR
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 |
5
PurR
Lactobacillus fermentum IFO 3956 |
4
PurR
Lactobacillus gasseri ATCC 33323 |
7
PurR
Lactobacillus helveticus DPC 4571 |
4
PurR
Lactobacillus johnsonii FI9785 |
5
PurR
Lactobacillus johnsonii NCC 533 |
5
PurR
Lactobacillus paracasei subsp. paracasei 8700:2 |
7
PurR
Lactobacillus plantarum JDM1 |
7
PurR
Lactobacillus plantarum WCFS1 |
4
PurR
Lactobacillus reuteri 100-23 |
5
PurR
Lactobacillus reuteri DSM 20016 |
4
PurR
Lactobacillus reuteri JCM 1112 |
6
PurR
Lactobacillus rhamnosus GG |
6
PurR
Lactobacillus rhamnosus HN001 |
6
PurR
Lactobacillus rhamnosus Lc 705 |
6
PurR
Lactobacillus sakei subsp. sakei 23K |
7
PurR
Lactobacillus salivarius subsp. salivarius UCC118 |
5
PurR
Leuconostoc citreum KM20 |
6
PurR
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 |
2
PurR
Oenococcus oeni ATCC BAA-1163 |
3
PurR
Oenococcus oeni PSU-1 |
8
PurR
Pediococcus pentosaceus ATCC 25745 |
| RbsR | - | - |
3
RbsR
Lactobacillus brevis ATCC 367 |
1
RbsR
Lactobacillus casei ATCC 334 |
1
RbsR
Lactobacillus casei BL23 |
- | - | - |
3
RbsR
Lactobacillus fermentum IFO 3956 |
- | - | - | - |
1
RbsR
Lactobacillus paracasei subsp. paracasei 8700:2 |
1
RbsR
Lactobacillus plantarum JDM1 |
1
RbsR
Lactobacillus plantarum WCFS1 |
1
RbsR
Lactobacillus reuteri 100-23 |
1
RbsR
Lactobacillus reuteri DSM 20016 |
1
RbsR
Lactobacillus reuteri JCM 1112 |
1
RbsR
Lactobacillus rhamnosus GG |
1
RbsR
Lactobacillus rhamnosus HN001 |
1
RbsR
Lactobacillus rhamnosus Lc 705 |
1
RbsR
Lactobacillus sakei subsp. sakei 23K |
- | - |
2
RbsR
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 |
1
RbsR
Oenococcus oeni ATCC BAA-1163 |
2
RbsR
Oenococcus oeni PSU-1 |
1
RbsR
Pediococcus pentosaceus ATCC 25745 |
| Rex |
2
Rex
Carnobacterium sp. AT7 |
3
Rex
Lactobacillus acidophilus NCFM |
6
Rex
Lactobacillus brevis ATCC 367 |
3
Rex
Lactobacillus casei ATCC 334 |
3
Rex
Lactobacillus casei BL23 |
2
Rex
Lactobacillus crispatus ST1 |
2
Rex
Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842 |
2
Rex
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 |
4
Rex
Lactobacillus fermentum IFO 3956 |
2
Rex
Lactobacillus gasseri ATCC 33323 |
2
Rex
Lactobacillus helveticus DPC 4571 |
2
Rex
Lactobacillus johnsonii FI9785 |
2
Rex
Lactobacillus johnsonii NCC 533 |
3
Rex
Lactobacillus paracasei subsp. paracasei 8700:2 |
3
Rex
Lactobacillus plantarum JDM1 |
4
Rex
Lactobacillus plantarum WCFS1 |
3
Rex
Lactobacillus reuteri 100-23 |
5
Rex
Lactobacillus reuteri DSM 20016 |
5
Rex
Lactobacillus reuteri JCM 1112 |
3
Rex
Lactobacillus rhamnosus GG |
3
Rex
Lactobacillus rhamnosus HN001 |
2
Rex
Lactobacillus rhamnosus Lc 705 |
6
Rex
Lactobacillus sakei subsp. sakei 23K |
3
Rex
Lactobacillus salivarius subsp. salivarius UCC118 |
4
Rex
Leuconostoc citreum KM20 |
4
Rex
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 |
3
Rex
Oenococcus oeni ATCC BAA-1163 |
3
Rex
Oenococcus oeni PSU-1 |
3
Rex
Pediococcus pentosaceus ATCC 25745 |
| RpiR | - |
1
RpiR
Lactobacillus acidophilus NCFM |
- |
2
RpiR
Lactobacillus casei ATCC 334 |
2
RpiR
Lactobacillus casei BL23 |
1
RpiR
Lactobacillus crispatus ST1 |
- | - | - |
1
RpiR
Lactobacillus gasseri ATCC 33323 |
1
RpiR
Lactobacillus helveticus DPC 4571 |
1
RpiR
Lactobacillus johnsonii FI9785 |
- |
2
RpiR
Lactobacillus paracasei subsp. paracasei 8700:2 |
- | - | - | - | - | - | - | - | - |
2
RpiR
Lactobacillus salivarius subsp. salivarius UCC118 |
- | - | - | - | - |
| ScrR | - |
2
ScrR
Lactobacillus acidophilus NCFM |
- | - | - |
2
ScrR
Lactobacillus crispatus ST1 |
- | - |
2
ScrR
Lactobacillus fermentum IFO 3956 |
2
ScrR
Lactobacillus gasseri ATCC 33323 |
- |
3
ScrR
Lactobacillus johnsonii FI9785 |
3
ScrR
Lactobacillus johnsonii NCC 533 |
- |
2
ScrR
Lactobacillus plantarum JDM1 |
2
ScrR
Lactobacillus plantarum WCFS1 |
- |
1
ScrR
Lactobacillus reuteri DSM 20016 |
1
ScrR
Lactobacillus reuteri JCM 1112 |
- | - | - |
2
ScrR
Lactobacillus sakei subsp. sakei 23K |
2
ScrR
Lactobacillus salivarius subsp. salivarius UCC118 |
- |
4
ScrR
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 |
- | - |
2
ScrR
Pediococcus pentosaceus ATCC 25745 |
| ScrR2 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
2
ScrR2
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 |
- | - | - |
| SdaR | - | - |
2
SdaR
Lactobacillus brevis ATCC 367 |
- | - | - | - | - | - | - | - | - | - | - | - | - | - |
1
SdaR
Lactobacillus reuteri DSM 20016 |
2
SdaR
Lactobacillus reuteri JCM 1112 |
- | - | - |
1
SdaR
Lactobacillus sakei subsp. sakei 23K |
- | - | - | - | - | - |
| TagR | - | - | - |
2
TagR
Lactobacillus casei ATCC 334 |
2
TagR
Lactobacillus casei BL23 |
- | - | - | - |
1
TagR
Lactobacillus gasseri ATCC 33323 |
- |
2
TagR
Lactobacillus johnsonii FI9785 |
2
TagR
Lactobacillus johnsonii NCC 533 |
2
TagR
Lactobacillus paracasei subsp. paracasei 8700:2 |
- | - | - | - | - |
2
TagR
Lactobacillus rhamnosus GG |
- |
2
TagR
Lactobacillus rhamnosus Lc 705 |
- | - | - | - | - | - |
2
TagR
Pediococcus pentosaceus ATCC 25745 |
| TreR | - |
2
TreR
Lactobacillus acidophilus NCFM |
- |
1
TreR
Lactobacillus casei ATCC 334 |
1
TreR
Lactobacillus casei BL23 |
- | - | - | - |
1
TreR
Lactobacillus gasseri ATCC 33323 |
- | - | - |
1
TreR
Lactobacillus paracasei subsp. paracasei 8700:2 |
1
TreR
Lactobacillus plantarum JDM1 |
1
TreR
Lactobacillus plantarum WCFS1 |
- | - | - |
1
TreR
Lactobacillus rhamnosus GG |
- |
1
TreR
Lactobacillus rhamnosus Lc 705 |
2
TreR
Lactobacillus sakei subsp. sakei 23K |
2
TreR
Lactobacillus salivarius subsp. salivarius UCC118 |
1
TreR
Leuconostoc citreum KM20 |
1
TreR
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 |
- |
1
TreR
Oenococcus oeni PSU-1 |
2
TreR
Pediococcus pentosaceus ATCC 25745 |
| UxuR | - | - |
3
UxuR
Lactobacillus brevis ATCC 367 |
- | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| XylR | - | - |
5
XylR
Lactobacillus brevis ATCC 367 |
- | - | - | - | - |
3
XylR
Lactobacillus fermentum IFO 3956 |
- | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
2
XylR
Leuconostoc citreum KM20 |
2
XylR
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 |
- | - |
2
XylR
Pediococcus pentosaceus ATCC 25745 |
| YtrA | - | - |
1
YtrA
Lactobacillus brevis ATCC 367 |
1
YtrA
Lactobacillus casei ATCC 334 |
1
YtrA
Lactobacillus casei BL23 |
- |
1
YtrA
Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842 |
1
YtrA
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 |
- | - | - | - | - |
1
YtrA
Lactobacillus paracasei subsp. paracasei 8700:2 |
1
YtrA
Lactobacillus plantarum JDM1 |
1
YtrA
Lactobacillus plantarum WCFS1 |
- | - | - |
1
YtrA
Lactobacillus rhamnosus GG |
1
YtrA
Lactobacillus rhamnosus HN001 |
1
YtrA
Lactobacillus rhamnosus Lc 705 |
1
YtrA
Lactobacillus sakei subsp. sakei 23K |
- | - |
1
YtrA
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 |
1
YtrA
Oenococcus oeni ATCC BAA-1163 |
1
YtrA
Oenococcus oeni PSU-1 |
- |
| YwzG | - | - |
1
YwzG
Lactobacillus brevis ATCC 367 |
- | - | - | - | - | - | - | - | - | - | - |
1
YwzG
Lactobacillus plantarum JDM1 |
1
YwzG
Lactobacillus plantarum WCFS1 |
- |
1
YwzG
Lactobacillus reuteri DSM 20016 |
1
YwzG
Lactobacillus reuteri JCM 1112 |
- | - | - | - |
1
YwzG
Lactobacillus salivarius subsp. salivarius UCC118 |
- |
1
YwzG
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 |
- | - |
1
YwzG
Pediococcus pentosaceus ATCC 25745 |
| YxeR | - |
1
YxeR
Lactobacillus acidophilus NCFM |
1
YxeR
Lactobacillus brevis ATCC 367 |
1
YxeR
Lactobacillus casei ATCC 334 |
- |
1
YxeR
Lactobacillus crispatus ST1 |
- |
1
YxeR
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 |
1
YxeR
Lactobacillus fermentum IFO 3956 |
- |
1
YxeR
Lactobacillus helveticus DPC 4571 |
- |
1
YxeR
Lactobacillus johnsonii NCC 533 |
1
YxeR
Lactobacillus paracasei subsp. paracasei 8700:2 |
- | - |
1
YxeR
Lactobacillus reuteri 100-23 |
- |
1
YxeR
Lactobacillus reuteri JCM 1112 |
- | - | - | - |
1
YxeR
Lactobacillus salivarius subsp. salivarius UCC118 |
1
YxeR
Leuconostoc citreum KM20 |
- |
2
YxeR
Oenococcus oeni ATCC BAA-1163 |
2
YxeR
Oenococcus oeni PSU-1 |
1
YxeR
Pediococcus pentosaceus ATCC 25745 |
| YybA | - |
1
YybA
Lactobacillus acidophilus NCFM |
- | - | - | - | - | - | - | - | - | - |
1
YybA
Lactobacillus johnsonii NCC 533 |
- | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| Zur | - | - |
3
Zur
Lactobacillus brevis ATCC 367 |
4
Zur
Lactobacillus casei ATCC 334 |
4
Zur
Lactobacillus casei BL23 |
- | - | - |
3
Zur
Lactobacillus fermentum IFO 3956 |
- | - | - | - |
4
Zur
Lactobacillus paracasei subsp. paracasei 8700:2 |
6
Zur
Lactobacillus plantarum JDM1 |
6
Zur
Lactobacillus plantarum WCFS1 |
1
Zur
Lactobacillus reuteri 100-23 |
1
Zur
Lactobacillus reuteri DSM 20016 |
1
Zur
Lactobacillus reuteri JCM 1112 |
4
Zur
Lactobacillus rhamnosus GG |
4
Zur
Lactobacillus rhamnosus HN001 |
4
Zur
Lactobacillus rhamnosus Lc 705 |
1
Zur
Lactobacillus sakei subsp. sakei 23K |
3
Zur
Lactobacillus salivarius subsp. salivarius UCC118 |
- |
2
Zur
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 |
2
Zur
Oenococcus oeni ATCC BAA-1163 |
3
Zur
Oenococcus oeni PSU-1 |
1
Zur
Pediococcus pentosaceus ATCC 25745 |
| 5 | Orthologous regulator is detected and five members of regulon are predicted in a target genome |
| - | Orthologous regulator is detected in a target genome but no potential members of regulon where identified |
| 3 | Three potential members of regulon were found, but orthologous regulator could not be detected in a target genome. |
| 3 | Neither orthologous regulator no potential members of regulon were found in a target genome |