Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagated regulons of Lactobacillus fermentum IFO 3956

Type Regulator Effector Pathway Genes Sites
TF ArgR Arginine Arginine degradation; Arginine biosynthesis 6 32
TF BirA Biotin Biotin biosynthesis 1 1
TF CcpA HPr, phosphocarrier protein; Fructose-1,6-bisphosphate Carbon catabolism 36 49
TF CopR Copper ion, (Cu2+) Copper homeostasis 2 3
TF CtsR Heat shock Heat shock response 1 1
TF DeoR Deoxyribose-5-phosphate Deoxynucleoside utilization 2 2
TF FabT Long-chain acyl-ACP Fatty acid biosynthesis 1 1
TF FlpA Oxygen Heavy metal resistance 2 2
TF GalR Galactose Galactosides utilization; Galactose utilization 1 1
TF GntR1 Gluconate Gluconate utilization 1 1
TF GntR2 Gluconate Gluconate utilization 1 1
TF HrcA Heat shock Heat shock response 2 2
TF LacR Lactose Lactose utilization 2 2
TF LexA DNA damage SOS response 6 7
TF Lp_2742 Multidrug efflux; Multidrug resistance 1 1
TF MalR Maltose Maltose utilization; Maltodextrin utilization 1 1
TF MalR3 Maltose Maltose utilization; Maltodextrin utilization 1 1
TF MntR Manganese ion, (Mn2+) Manganese homeostasis 1 1
TF NagR N-acetylglucosamine-6-phosphate N-acetylglucosamine utilization 1 1
TF NihR Nickel homeostasis 2 2
TF NrdR Deoxyribonucleotides Deoxyribonucleotide biosynthesis 2 4
TF NrtR Adenosine diphosphate ribose NAD biosynthesis 1 1
TF PerR Iron ion, (Fe2+); Manganese ion, (Mn2+); Hydrogen peroxide Manganese homeostasis; Oxidative stress response; Iron homeostasis 5 10
TF PurR 5-phosphoribosyl 1-pyrophosphate Purine metabolism 6 8
TF RbsR Ribose Ribose utilization 3 4
TF Rex NADH Energy metabolism 5 8
TF ScrR Sucrose-6-phosphate Sucrose utilization 2 2
TF XylR Xylose Xylose utilization 3 5
TF YxeR Antibiotic resistance 1 2
TF Zur Zinc ion, (Zn2+) Zinc homeostasis 3 3
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