Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of Lp_2742 regulog to Lactobacillus fermentum IFO 3956

Reference regulog properties
Source regulog: Lp_2742 - Lactobacillaceae
Regulator type: Transcription factor
Regulator family: GntR/Others
Regulation mode:
Biological process: Multidrug efflux; Multidrug resistance
Effector:
Phylum: Firmicutes
Propagated regulon:
Target genome Lactobacillus fermentum IFO 3956
Orthologous TF(s) LAF_1400
Regulated genes 1
Built upon 8 sites [see more]
Predicted regulatory interactions in Lactobacillus fermentum IFO 3956
Locus tag Position Score Sequence
Position: -48
Score: 6.7
Sequence: TTAGTTACACAAGTAATTAA
Locus tag: LAF_1400
LAF_1400 -48 6.7 TTAGTTACACAAGTAATTAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: lp_2742
Ortholog function: Transcriptional regulator, GntR family
Lactobacillus brevis ATCC 367 LVIS_0389 -46 6.7 TTAATTACACAAGTAACTAA
Lactobacillus fermentum IFO 3956 LAF_1400 -48 6.7 TTAGTTACACAAGTAATTAA
Lactobacillus plantarum WCFS1 lp_2742 -59 6.8 TTAGTTACATAAGTAATTAA
Lactobacillus reuteri JCM 1112 LAR_1262 -48 6.5 TTAGTTACATAAGTGATTAA
Lactobacillus salivarius subsp. salivarius UCC118 LSL_1617 -52 6.8 TTAGTTACATAAGTAATTAA
Pediococcus pentosaceus ATCC 25745 PEPE_1308 -61 6.3 TTAGTTACATGACTAATTAA