Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of ScrR regulog to Lactobacillus fermentum IFO 3956

Reference regulog properties
Source regulog: ScrR - Lactobacillaceae
Regulator type: Transcription factor
Regulator family: LacI
Regulation mode: repressor
Biological process: Sucrose utilization
Effector: Sucrose-6-phosphate
Phylum: Firmicutes
Propagated regulon:
Target genome Lactobacillus fermentum IFO 3956
Orthologous TF(s) LAF_1819
Regulated genes 2
Built upon 24 sites [see more]
Predicted regulatory interactions in Lactobacillus fermentum IFO 3956
Locus tag Position Score Sequence
Position: -106
Score: 5.9
Sequence: TATGTCAAACGGTTGACAAT
Locus tag: LAF_1578
LAF_1578 -106 5.9 TATGTCAAACGGTTGACAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: scrA
Ortholog function: Sucrose-specific PTS system, EIIABC component (EC 2.7.1.69)
Lactobacillus acidophilus NCFM LBA0401 -174 6.1 TGTGTCAAACGTTTATCATA
-86 6.5 TGTGTCAAACGATTGACATA
Lactobacillus fermentum IFO 3956 LAF_1578 -106 5.9 TATGTCAAACGGTTGACAAT
Lactobacillus johnsonii NCC 533 LJ0519 -168 5.7 TATGTCAAACGAATAACAGT
-91 6.1 TATGATAAGCGCTTGACATA
Lactobacillus plantarum WCFS1 lp_0185 -193 6.5 TATGTCAATCGTTTGACATT
-104 6.1 TGTATCAAACGCTTGACATA
Lactobacillus sakei subsp. sakei 23K LSA1792 -169 6.1 TATGTCAAACGTATGTCATT
-101 6.3 TATGATAATCGTTTGACATA
Lactobacillus salivarius subsp. salivarius UCC118 LSL_0066 -107 6.2 TGTGATAAACGATTGACATA
Pediococcus pentosaceus ATCC 25745 PEPE_0518 -193 6.5 TATGTCAATCGTTTGACATT
-104 6.1 TGTATCAAACGCTTGACATA
Position: -73
Score: 5.5
Sequence: TATGCTAATCGATTGACAGC
Locus tag: LAF_1580
LAF_1580 -73 5.5 TATGCTAATCGATTGACAGC
Supported by regulated orthologs from reference regulons
Ortholog gene name: scrB
Ortholog function: Sucrose-6-phosphate hydrolase (EC 3.2.1.26)
Lactobacillus acidophilus NCFM LBA0400 -168 6.4 TATGTCAATCGTTTGACACA
-80 6.2 TATGATAAACGTTTGACACA
Lactobacillus fermentum IFO 3956 LAF_1580 -73 5.5 TATGCTAATCGATTGACAGC
Lactobacillus johnsonii NCC 533 LJ0518 -164 5.9 TATGTCAAGCGCTTATCATA
-87 5.3 ACTGTTATTCGTTTGACATA
Lactobacillus plantarum WCFS1 lp_0187 -171 6 TATGTCAAGCGTTTGATACA
-82 6.4 AATGTCAAACGATTGACATA
Lactobacillus sakei subsp. sakei 23K LSA1793 -145 6.2 TATGTCAAACGATTATCATA
-77 5.9 AATGACATACGTTTGACATA
Lactobacillus salivarius subsp. salivarius UCC118 LSL_0065 -81 5.9 TATGTTATACGATTGACAGT
Pediococcus pentosaceus ATCC 25745 PEPE_0519 -171 6 TATGTCAAGCGTTTGATACA
-82 6.4 AATGTCAAACGATTGACATA
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