Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of BirA regulog to Lactobacillus fermentum IFO 3956

Reference regulog properties
Source regulog: BirA - Lactobacillaceae
Regulator type: Transcription factor
Regulator family: BirA
Regulation mode: repressor
Biological process: Biotin biosynthesis
Effector: Biotin
Phylum: Firmicutes
Propagated regulon:
Target genome Lactobacillus fermentum IFO 3956
Orthologous TF(s) LAF_0322
Regulated genes 1
Built upon 10 sites [see more]
Predicted regulatory interactions in Lactobacillus fermentum IFO 3956
Locus tag Position Score Sequence
Position: -54
Score: 8.5
Locus tag: LAF_0321
Supported by regulated orthologs from reference regulons
Ortholog gene name: bioY
Ortholog function: Substrate-specific component BioY of biotin ECF transporter
Lactobacillus fermentum IFO 3956 LAF_0321 -54 8.5 ATTGTAACC-(16)-GGTTACAAA
Lactobacillus plantarum WCFS1 lp_0336 -76 7.7 ACAGTAACC-(16)-GGTTACTGT
Lactobacillus reuteri JCM 1112 LAR_0704 -71 8.7 ATAGTAACC-(16)-GGTTACAAT
Lactobacillus salivarius subsp. salivarius UCC118 LSL_0074 -91 8.2 ATTGTTAAC-(16)-GTTAACAAT
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 LEUM_0516 -45 8.4 TTAGTAAAC-(16)-GTTTACTAA
Pediococcus pentosaceus ATCC 25745 PEPE_1637 -81 8.6 ATAGTAACC-(16)-GGTTACTAT