Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of LacR regulog to Lactobacillus fermentum IFO 3956

Reference regulog properties
Source regulog: LacR - Lactobacillaceae
Regulator type: Transcription factor
Regulator family: LacI
Regulation mode: repressor
Biological process: Lactose utilization
Effector: Lactose
Phylum: Firmicutes
Propagated regulon:
Target genome Lactobacillus fermentum IFO 3956
Orthologous TF(s) LAF_0781
Regulated genes 2
Built upon 11 sites [see more]
Predicted regulatory interactions in Lactobacillus fermentum IFO 3956
Locus tag Position Score Sequence
Position: -112
Score: 5.5
Sequence: AATATTTACTAATTAAC
Locus tag: LAF_0780
LAF_0780 -112 5.5 AATATTTACTAATTAAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: lacZ
Ortholog function: Beta-galactosidase (EC 3.2.1.23)
Lactobacillus fermentum IFO 3956 LAF_0780 -112 5.5 AATATTTACTAATTAAC
Lactobacillus plantarum WCFS1 lp_3469 -108 5.6 GATATTTAGTAATTATT
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 LEUM_1064 -110 5.4 ATCATTTACTAATTTTT
Position: -185
Score: 5.5
Sequence: GTTAATTAGTAAATATT
Locus tag: LAF_0781
LAF_0781 -185 5.5 GTTAATTAGTAAATATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: lacR
Ortholog function: Lactose utilization transcriptional regulator, LacI family
Lactobacillus fermentum IFO 3956 LAF_0781 -185 5.5 GTTAATTAGTAAATATT
Lactobacillus plantarum WCFS1 lp_3470 -155 5.6 AATAATTACTAAATATC
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 LEUM_1063 -119 5.4 AAAAATTAGTAAATGAT
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