Propagation of NrdR regulog to Lactobacillus fermentum IFO 3956

Reference regulog properties
Source regulog:	NrdR - Lactobacillaceae
Regulator type:	Transcription factor
Regulator family:	NrdR
Regulation mode:	repressor
Biological process:	Deoxyribonucleotide biosynthesis
Effector:	Deoxyribonucleotides
Phylum:	Firmicutes
Propagated regulon:
Target genome	Lactobacillus fermentum IFO 3956
Orthologous TF(s)	LAF_1314
Regulated genes	2

Built upon 81 sites [see more]

Predicted regulatory interactions in *Lactobacillus fermentum IFO 3956*
	Locus tag	Position	Score	Sequence
Position: -99 Score: 4.7 Sequence: CCACAAGATCTTGTAA Position: -68 Score: 5.3 Sequence: AAACTATATGTTGTGT Locus tag: LAF_1376
	LAF_1376	-99	4.7	CCACAAGATCTTGTAA
		-68	5.3	AAACTATATGTTGTGT
Supported by regulated orthologs from reference regulons
Ortholog gene name: nrdD
Ortholog function: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
Lactobacillus acidophilus NCFM	LBA0160	-58	4.5	ATACAAGATGTTGTGC
Lactobacillus casei ATCC 334	LSEI_0131	-133	5	ACACACTATATAGTGT
		-131	5.5	ACACTATATAGTGTAT
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365	LBUL_0185	-173	5.3	CCACAATATCTGGTAT
		-131	4.6	AAACAAGATGTAGTGG
Lactobacillus fermentum IFO 3956	LAF_1376	-99	4.7	CCACAAGATCTTGTAA
		-68	5.3	AAACTATATGTTGTGT
Lactobacillus helveticus DPC 4571	lhv_0169	-56	5.1	ATACAAGATGTTGTAT
Lactobacillus johnsonii NCC 533	LJ0137	-63	4.6	CTACAATATCATGTAG
Lactobacillus plantarum WCFS1	lp_2932	-80	5.5	CTACTATATATAGTAT
		-49	4.4	GCACTATCAATTGTAT
Lactobacillus reuteri JCM 1112	LAR_1249	-92	5.3	CCACAACATATAGTGT
Lactobacillus rhamnosus GG	LGG_00138	-131	5.5	CCACTATATAGTGTAT
Lactobacillus sakei subsp. sakei 23K	LSA1459	-75	5.1	ACACTATATATAGTTG
Lactobacillus salivarius subsp. salivarius UCC118	LSL_1332	-108	5.5	ATACTATATATAGTGT
		-76	5.9	ACACTATATATTGTAT
Pediococcus pentosaceus ATCC 25745	PEPE_0484	-133	5.7	ATACTATATATTGTAT

Position: -30 Score: 4.7 Sequence: CCACAACATCTTGTGA Position: 11 Score: 4.7 Sequence: AATCAATATCTTGTAT Locus tag: LAF_1675
	LAF_1675	-30	4.7	CCACAACATCTTGTGA
		11	4.7	AATCAATATCTTGTAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: nrdI
Ortholog function: Ribonucleotide reduction protein NrdI
Lactobacillus fermentum IFO 3956	LAF_1675	-30	4.7	CCACAACATCTTGTGA

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Propagation of NrdR regulog to Lactobacillus fermentum IFO 3956

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --