Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Profile of regulator NrdR in Lactobacillaceae

Properties
Regulator family: NrdR
Regulation mode: repressor
Biological process: Deoxyribonucleotide biosynthesis
Effector: Deoxyribonucleotides
Regulog: NrdR - Lactobacillaceae
Member of regulog collections
Transcription factor binding sites
Locus Tag Name Position Score Sequence
Lactobacillus acidophilus NCFM
LBA0041 nrdJ -52 3.5 ATCATACATAATGTGT
LBA1653 pnuN -53 5.5 GCACAATATATAGTAT
LBA0160 nrdD -58 4.5 ATACAAGATGTTGTGC
LBA1949 dgk1 -53 4 CTACCAGATATTGACT
LBA1949 dgk1 -23 4.7 ACCCTATATATGGTAG
LBA0041 nrdJ -83 5.1 GTACAAGATATTGTGG
Lactobacillus brevis ATCC 367
LVIS_1520 dgk2 -41 3.6 GTACACTATATCTTGT
LVIS_1520 dgk2 -39 5.7 ACACTATATCTTGTAT
LVIS_0597 nrdH -94 4.6 CTACCAAATATGGTGT
LVIS_1711 dgk1 -100 4.8 CCACGATATATTGTCT
LVIS_1711 dgk1 -68 4.9 GTACAATATGTGGTGT
LVIS_0597 nrdH -126 4.5 ACACCATATTTGGTAG
LVIS_0311 pnuN -41 3.5 GTACTAAATATAGAAA
LVIS_0311 pnuN -82 5.8 CCACAATATATTGTGT
LVIS_1898 nrdJ -45 4.6 CTACCATATATAGCAT
LVIS_1898 nrdJ -77 5.3 TAACTATATATTGTAT
Lactobacillus casei ATCC 334
LSEI_1742 nrdG -113 4.3 ATACTACATCTTGGGG
LSEI_0131 nrdD -131 5.5 ACACTATATAGTGTAT
LSEI_1204 pnuN -105 3.6 CCAATATATTGTATAT
LSEI_1204 pnuN -107 4.9 CACCAATATATTGTAT
LSEI_0131 nrdD -133 5 ACACACTATATAGTGT
LSEI_1467 nrdH -85 4.6 CCCCAAGATATGGTAT
LSEI_2287 nrdJ -31 5.3 ATACCATATCTTGTAT
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365
LBUL_0185 nrdD -173 5.3 CCACAATATCTGGTAT
LBUL_0185 nrdD -131 4.6 AAACAAGATGTAGTGG
LBUL_2017 dgk1 -34 3.6 AACGTAGATCTAGTAT
LBUL_2017 dgk1 -64 4.2 GCACTATATCTTGCAA
LBUL_0079 nrdJ -138 3.7 ACACAGTTTCTCGTGT
LBUL_0079 nrdJ -107 5.4 ACACTACATCTTGTGT
Lactobacillus fermentum IFO 3956
LAF_1675 nrdI -30 4.7 CCACAACATCTTGTGA
LAF_1376 nrdD -99 4.7 CCACAAGATCTTGTAA
LAF_1376 nrdD -68 5.3 AAACTATATGTTGTGT
LAF_0281 nrdH -109 5.4 CCACCATATCTTGTGT
LAF_0281 nrdH -78 4.4 GCACGAGATATGGTGG
Lactobacillus helveticus DPC 4571
lhv_2079 dgk1 -28 5 CCACAATATCTCGTAT
lhv_2079 dgk1 -45 3.8 AAAAAAGAGCTTGTGT
lhv_0169 nrdD -56 5.1 ATACAAGATGTTGTAT
lhv_1757 pnuN -172 3.7 ACACAACATATAGATA
lhv_1757 pnuN -140 4.5 GCACAATATTTTGTAA
lhv_1757 pnuN -50 4.9 ACACAAAATGTTGTAT
lhv_2079 dgk1 2 4.4 GTCCAATATCTGGTAT
lhv_0042 nrdJ -85 5.3 CCACAAGATATTGTGG
Lactobacillus johnsonii NCC 533
LJ0137 nrdD -63 4.6 CTACAATATCATGTAG
LJ1824 dgk1 -56 4.5 CTACCAGATATTGAAT
LJ0643 pnuN -46 5.7 GCACAATATATTGTGT
LJ1824 dgk1 -26 5.3 AAACTATATATTGTAG
Lactobacillus plantarum WCFS1
lp_1329 dgk2 -72 3.9 AAAGTCTATATGGTAT
lp_0694 nrdH -86 4.6 ACCCTAGATGTTGTGT
lp_1329 dgk2 -40 5.1 ATACAATATATTGTGC
lp_1011 dgk1 -99 4.4 TCACCAGATATTGCAT
lp_1011 dgk1 -67 5 GTACAATATGTAGTGT
lp_2932 nrdD -49 4.4 GCACTATCAATTGTAT
lp_2932 nrdD -80 5.5 CTACTATATATAGTAT
lp_0259 pnuN -108 5.7 ATACAATATATTGTGT
lp_0259 pnuN -78 4.8 ACACTACATGTAGTAG
lp_0694 nrdH -54 4.7 TCACCACATGTTGTAT
Lactobacillus reuteri JCM 1112
LAR_1249 nrdD -92 5.3 CCACAACATATAGTGT
LAR_0313 nrdH -115 5.6 GTACTATATATTGTGT
LAR_1221 dgk2 -88 4.4 CCACCAAATATTGTAA
LAR_1221 dgk2 -56 5 CCACAATATTTTGTAG
LAR_1670 pnuN -72 5.6 CCACAATATCTTGTGT
LAR_1670 pnuN -30 4.9 GCACAACATATAGTAG
Lactobacillus rhamnosus GG
LGG_00138 nrdD -131 5.5 CCACTATATAGTGTAT
LGG_01221 pnuN -107 4.9 CACCAATATATTGTAT
LGG_01221 pnuN -139 3.9 TTAGTACATGTTGTGG
LGG_01473 nrdH -85 4.6 CCCCAAGATATGGTGT
LGG_01800 nrdG -145 5 ATACTACATCTTGTAG
LGG_02296 nrdJ -31 5.3 ATACCATATCTTGTAT
Lactobacillus sakei subsp. sakei 23K
LSA0942 nrdH -89 5 CTACCATATCTGGTAT
LSA1459 nrdD -75 5.1 ACACTATATATAGTTG
LSA1189 pnuN -155 4.2 CTACCATATTTTGAAT
LSA1189 pnuN -105 5.4 GTACTATATATAGTGT
Lactobacillus salivarius subsp. salivarius UCC118
LSL_1332 nrdD -108 5.5 ATACTATATATAGTGT
LSL_1332 nrdD -76 5.9 ACACTATATATTGTAT
LSL_1230 nrdH -84 5.5 CCACAATATATGGTGT
LSL_1230 nrdH -51 4.9 TCTCTATATATTGTAT
Pediococcus pentosaceus ATCC 25745
PEPE_1487 nrdH -122 5.3 GCACAATATATAGTGG
PEPE_0650 dgk2 -83 5.2 ATACAATATGTTGTGG
PEPE_1437 dgk1 -77 4.1 TTTCAAGATATTGTTT
PEPE_1437 dgk1 -46 4.4 GTACAATATGTAGTGC
PEPE_0483 mntH2 -133 5.7 ATACTATATATTGTAT
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