Collection of regulogs in Lactobacillaceae taxonomic group
Genomes | 15 |
TF regulogs | 82 |
TF regulons | 485 |
TF binding sites | 1848 |
RNA regulogs | 39 |
RNA regulons | 409 |
RNA sites | 581 |
This collection involves all regulons that were tentatively predicted by applying integrative comparative genomic approach to a single taxonomic group of closely-related genomes. To infer the regulons operated by transcription factors (TFs), we combined the identification of TF binding sites and cross-genome comparison of regulons with the analysis of the genomic and functional context of candidate target genes. To infer the regulons operated by regulatory RNAs such as riboswitches, we identified candidate RNA regulatory elements using HMM profiles and further analyzed their genomic and functional context.
TF | RNA | Total | ||||
---|---|---|---|---|---|---|
Genomes | Regulons | Sites | Regulons | Sites | Regulons | Sites |
Lactobacillus acidophilus NCFM | 26 | 116 | 26 | 41 | 52 | 157 |
Lactobacillus brevis ATCC 367 | 40 | 159 | 30 | 46 | 70 | 205 |
Lactobacillus casei ATCC 334 | 41 | 149 | 28 | 36 | 69 | 185 |
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 | 18 | 53 | 26 | 33 | 44 | 86 |
Lactobacillus fermentum IFO 3956 | 30 | 116 | 25 | 41 | 55 | 157 |
Lactobacillus helveticus DPC 4571 | 20 | 70 | 25 | 36 | 45 | 106 |
Lactobacillus johnsonii NCC 533 | 26 | 116 | 27 | 38 | 53 | 154 |
Lactobacillus plantarum WCFS1 | 47 | 210 | 31 | 50 | 78 | 260 |
Lactobacillus reuteri JCM 1112 | 32 | 118 | 28 | 43 | 60 | 161 |
Lactobacillus rhamnosus GG | 42 | 132 | 29 | 37 | 71 | 169 |
Lactobacillus sakei subsp. sakei 23K | 37 | 126 | 29 | 36 | 66 | 162 |
Lactobacillus salivarius subsp. salivarius UCC118 | 31 | 119 | 27 | 33 | 58 | 152 |
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 | 32 | 117 | 29 | 49 | 61 | 166 |
Oenococcus oeni PSU-1 | 25 | 92 | 19 | 23 | 44 | 115 |
Pediococcus pentosaceus ATCC 25745 | 38 | 155 | 30 | 39 | 68 | 194 |
Family | Type | Regulator | Function | |||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ArgR | TF | ArgR |
1
ArgR
Lactobacillus brevis ATCC 367 |
2
ArgR
Lactobacillus casei ATCC 334 |
4
ArgR
Lactobacillus fermentum IFO 3956 |
4
ArgR
Lactobacillus plantarum WCFS1 |
3
ArgR
Lactobacillus reuteri JCM 1112 |
2
ArgR
Lactobacillus rhamnosus GG |
1
ArgR
Lactobacillus sakei subsp. sakei 23K |
2
ArgR
Lactobacillus salivarius subsp. salivarius UCC118 |
4
ArgR
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 |
1
ArgR
Pediococcus pentosaceus ATCC 25745 |
Arginine degradation; Arginine biosynthesis | |||||
ArsR | TF | CzcR1 |
2
CzcR1
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 |
2
CzcR1
Lactobacillus johnsonii NCC 533 |
1
CzcR1
Lactobacillus reuteri JCM 1112 |
Zinc resistance; Cobalt resistance; Cadmium resistance | ||||||||||||
TF | CzcR2 |
2
CzcR2
Lactobacillus brevis ATCC 367 |
1
CzcR2
Lactobacillus rhamnosus GG |
2
CzcR2
Pediococcus pentosaceus ATCC 25745 |
Zinc resistance; Cobalt resistance; Cadmium resistance | |||||||||||||
BglG | TF | CelR |
1
CelR
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 |
Cellobiose utilization | ||||||||||||||
TF | GutR |
1
GutR
Lactobacillus casei ATCC 334 |
2
GutR
Lactobacillus plantarum WCFS1 |
1
GutR
Lactobacillus rhamnosus GG |
1
GutR
Lactobacillus salivarius subsp. salivarius UCC118 |
Sorbitol utilization | ||||||||||||
TF | MtlR |
1
MtlR
Lactobacillus casei ATCC 334 |
1
MtlR
Lactobacillus plantarum WCFS1 |
1
MtlR
Lactobacillus rhamnosus GG |
1
MtlR
Lactobacillus salivarius subsp. salivarius UCC118 |
Mannitol utilization | ||||||||||||
BirA | TF | BirA |
1
BirA
Lactobacillus fermentum IFO 3956 |
2
BirA
Lactobacillus plantarum WCFS1 |
1
BirA
Lactobacillus reuteri JCM 1112 |
1
BirA
Lactobacillus salivarius subsp. salivarius UCC118 |
2
BirA
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 |
1
BirA
Oenococcus oeni PSU-1 |
1
BirA
Pediococcus pentosaceus ATCC 25745 |
Biotin biosynthesis | ||||||||
CRP | TF | FlpA |
2
FlpA
Lactobacillus acidophilus NCFM |
2
FlpA
Lactobacillus casei ATCC 334 |
1
FlpA
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 |
4
FlpA
Lactobacillus fermentum IFO 3956 |
2
FlpA
Lactobacillus johnsonii NCC 533 |
4
FlpA
Lactobacillus plantarum WCFS1 |
2
FlpA
Lactobacillus reuteri JCM 1112 |
2
FlpA
Lactobacillus rhamnosus GG |
2
FlpA
Lactobacillus sakei subsp. sakei 23K |
4
FlpA
Lactobacillus salivarius subsp. salivarius UCC118 |
2
FlpA
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 |
2
FlpA
Oenococcus oeni PSU-1 |
2
FlpA
Pediococcus pentosaceus ATCC 25745 |
Heavy metal resistance | ||
TF | NihR |
2
NihR
Lactobacillus brevis ATCC 367 |
2
NihR
Lactobacillus fermentum IFO 3956 |
2
NihR
Lactobacillus plantarum WCFS1 |
2
NihR
Lactobacillus sakei subsp. sakei 23K |
2
NihR
Pediococcus pentosaceus ATCC 25745 |
Nickel homeostasis | |||||||||||
CcpN | TF | CcpN |
1
CcpN
Lactobacillus casei ATCC 334 |
1
CcpN
Lactobacillus rhamnosus GG |
2
CcpN
Lactobacillus sakei subsp. sakei 23K |
1
CcpN
Oenococcus oeni PSU-1 |
Gluconeogenesis | |||||||||||
CopY | TF | CopR |
1
CopR
Lactobacillus acidophilus NCFM |
2
CopR
Lactobacillus brevis ATCC 367 |
2
CopR
Lactobacillus casei ATCC 334 |
1
CopR
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 |
2
CopR
Lactobacillus fermentum IFO 3956 |
2
CopR
Lactobacillus helveticus DPC 4571 |
1
CopR
Lactobacillus johnsonii NCC 533 |
2
CopR
Lactobacillus plantarum WCFS1 |
2
CopR
Lactobacillus reuteri JCM 1112 |
1
CopR
Lactobacillus rhamnosus GG |
1
CopR
Lactobacillus sakei subsp. sakei 23K |
1
CopR
Lactobacillus salivarius subsp. salivarius UCC118 |
1
CopR
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 |
1
CopR
Oenococcus oeni PSU-1 |
1
CopR
Pediococcus pentosaceus ATCC 25745 |
Copper homeostasis |
CtsR | TF | CtsR |
4
CtsR
Lactobacillus brevis ATCC 367 |
3
CtsR
Lactobacillus casei ATCC 334 |
4
CtsR
Lactobacillus fermentum IFO 3956 |
5
CtsR
Lactobacillus plantarum WCFS1 |
4
CtsR
Lactobacillus reuteri JCM 1112 |
4
CtsR
Lactobacillus rhamnosus GG |
5
CtsR
Lactobacillus sakei subsp. sakei 23K |
4
CtsR
Lactobacillus salivarius subsp. salivarius UCC118 |
6
CtsR
Oenococcus oeni PSU-1 |
5
CtsR
Pediococcus pentosaceus ATCC 25745 |
Heat shock response | |||||
DeoR | TF | FruR |
1
FruR
Lactobacillus acidophilus NCFM |
1
FruR
Lactobacillus casei ATCC 334 |
1
FruR
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 |
1
FruR
Lactobacillus helveticus DPC 4571 |
1
FruR
Lactobacillus johnsonii NCC 533 |
1
FruR
Lactobacillus plantarum WCFS1 |
1
FruR
Lactobacillus rhamnosus GG |
1
FruR
Lactobacillus sakei subsp. sakei 23K |
1
FruR
Lactobacillus salivarius subsp. salivarius UCC118 |
1
FruR
Pediococcus pentosaceus ATCC 25745 |
Fructose utilization | |||||
TF | FucR |
1
FucR
Lactobacillus rhamnosus GG |
Fucose utilization | |||||||||||||||
TF | IolR |
2
IolR
Lactobacillus rhamnosus GG |
Inositol utilization | |||||||||||||||
TF | LacR |
1
LacR
Lactobacillus casei ATCC 334 |
1
LacR
Lactobacillus rhamnosus GG |
Lactose utilization | ||||||||||||||
TF | PflR |
3
PflR
Lactobacillus plantarum WCFS1 |
Formate metabolism | |||||||||||||||
DtxR | TF | MntR |
2
MntR
Lactobacillus brevis ATCC 367 |
2
MntR
Lactobacillus casei ATCC 334 |
1
MntR
Lactobacillus fermentum IFO 3956 |
2
MntR
Lactobacillus plantarum WCFS1 |
1
MntR
Lactobacillus reuteri JCM 1112 |
2
MntR
Lactobacillus rhamnosus GG |
3
MntR
Lactobacillus sakei subsp. sakei 23K |
1
MntR
Lactobacillus salivarius subsp. salivarius UCC118 |
Manganese homeostasis | |||||||
FUR | TF | PerR |
6
PerR
Lactobacillus brevis ATCC 367 |
5
PerR
Lactobacillus casei ATCC 334 |
4
PerR
Lactobacillus fermentum IFO 3956 |
6
PerR
Lactobacillus plantarum WCFS1 |
4
PerR
Lactobacillus reuteri JCM 1112 |
4
PerR
Lactobacillus rhamnosus GG |
4
PerR
Lactobacillus sakei subsp. sakei 23K |
5
PerR
Lactobacillus salivarius subsp. salivarius UCC118 |
2
PerR
Pediococcus pentosaceus ATCC 25745 |
Manganese homeostasis; Oxidative stress response; Iron homeostasis | ||||||
TF | Zur |
3
Zur
Lactobacillus brevis ATCC 367 |
5
Zur
Lactobacillus casei ATCC 334 |
3
Zur
Lactobacillus fermentum IFO 3956 |
6
Zur
Lactobacillus plantarum WCFS1 |
2
Zur
Lactobacillus reuteri JCM 1112 |
4
Zur
Lactobacillus rhamnosus GG |
1
Zur
Lactobacillus sakei subsp. sakei 23K |
3
Zur
Lactobacillus salivarius subsp. salivarius UCC118 |
2
Zur
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 |
3
Zur
Oenococcus oeni PSU-1 |
2
Zur
Pediococcus pentosaceus ATCC 25745 |
Zinc homeostasis | |||||
GntR/MocR | TF | LAR_1807 |
2
LAR_1807
Lactobacillus reuteri JCM 1112 |
2
LAR_1807
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 |
||||||||||||||
TF | PdxR |
2
PdxR
Lactobacillus brevis ATCC 367 |
2
PdxR
Lactobacillus sakei subsp. sakei 23K |
Pyridoxine biosynthesis | ||||||||||||||
TF | YdfD/YisV |
1
YdfD/YisV
Lactobacillus plantarum WCFS1 |
Metabolite transport | |||||||||||||||
GntR/Others | TF | AgaR2 |
1
AgaR2
Lactobacillus helveticus DPC 4571 |
2
AgaR2
Lactobacillus johnsonii NCC 533 |
1
AgaR2
Lactobacillus rhamnosus GG |
1
AgaR2
Pediococcus pentosaceus ATCC 25745 |
N-acetylgalactosamine utilization | |||||||||||
TF | AraR |
1
AraR
Lactobacillus brevis ATCC 367 |
3
AraR
Lactobacillus fermentum IFO 3956 |
2
AraR
Lactobacillus plantarum WCFS1 |
1
AraR
Lactobacillus reuteri JCM 1112 |
1
AraR
Lactobacillus sakei subsp. sakei 23K |
1
AraR
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 |
1
AraR
Oenococcus oeni PSU-1 |
1
AraR
Pediococcus pentosaceus ATCC 25745 |
Arabinose utilization | ||||||||
TF | BusR |
2
BusR
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 |
Betaine utilization | |||||||||||||||
TF | Lp_2742 |
1
Lp_2742
Lactobacillus brevis ATCC 367 |
1
Lp_2742
Lactobacillus fermentum IFO 3956 |
1
Lp_2742
Lactobacillus plantarum WCFS1 |
1
Lp_2742
Lactobacillus reuteri JCM 1112 |
1
Lp_2742
Lactobacillus sakei subsp. sakei 23K |
1
Lp_2742
Lactobacillus salivarius subsp. salivarius UCC118 |
2
Lp_2742
Pediococcus pentosaceus ATCC 25745 |
Multidrug efflux; Multidrug resistance | |||||||||
TF | NagR |
7
NagR
Lactobacillus acidophilus NCFM |
4
NagR
Lactobacillus brevis ATCC 367 |
3
NagR
Lactobacillus casei ATCC 334 |
4
NagR
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 |
1
NagR
Lactobacillus fermentum IFO 3956 |
4
NagR
Lactobacillus helveticus DPC 4571 |
4
NagR
Lactobacillus johnsonii NCC 533 |
5
NagR
Lactobacillus plantarum WCFS1 |
2
NagR
Lactobacillus reuteri JCM 1112 |
3
NagR
Lactobacillus rhamnosus GG |
4
NagR
Lactobacillus sakei subsp. sakei 23K |
3
NagR
Lactobacillus salivarius subsp. salivarius UCC118 |
2
NagR
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 |
3
NagR
Oenococcus oeni PSU-1 |
5
NagR
Pediococcus pentosaceus ATCC 25745 |
N-acetylglucosamine utilization | |
TF | TreR |
2
TreR
Lactobacillus acidophilus NCFM |
1
TreR
Lactobacillus casei ATCC 334 |
2
TreR
Lactobacillus johnsonii NCC 533 |
1
TreR
Lactobacillus plantarum WCFS1 |
1
TreR
Lactobacillus rhamnosus GG |
2
TreR
Lactobacillus sakei subsp. sakei 23K |
2
TreR
Lactobacillus salivarius subsp. salivarius UCC118 |
1
TreR
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 |
1
TreR
Oenococcus oeni PSU-1 |
2
TreR
Pediococcus pentosaceus ATCC 25745 |
Trehalose utilization | ||||||
TF | UxuR |
3
UxuR
Lactobacillus brevis ATCC 367 |
Glucuronate utilization; Galacturonate utilization | |||||||||||||||
TF | YhcF |
2
YhcF
Lactobacillus acidophilus NCFM |
1
YhcF
Lactobacillus brevis ATCC 367 |
1
YhcF
Lactobacillus casei ATCC 334 |
3
YhcF
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 |
2
YhcF
Lactobacillus helveticus DPC 4571 |
2
YhcF
Lactobacillus johnsonii NCC 533 |
1
YhcF
Lactobacillus plantarum WCFS1 |
1
YhcF
Lactobacillus rhamnosus GG |
1
YhcF
Pediococcus pentosaceus ATCC 25745 |
Multidrug resistance; Multidrug efflux | |||||||
TF | YtrA |
1
YtrA
Lactobacillus brevis ATCC 367 |
1
YtrA
Lactobacillus casei ATCC 334 |
1
YtrA
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 |
1
YtrA
Lactobacillus plantarum WCFS1 |
1
YtrA
Lactobacillus rhamnosus GG |
1
YtrA
Lactobacillus sakei subsp. sakei 23K |
1
YtrA
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 |
1
YtrA
Oenococcus oeni PSU-1 |
Hypothetical ABC transporter | ||||||||
HrcA | TF | HrcA |
6
HrcA
Lactobacillus acidophilus NCFM |
3
HrcA
Lactobacillus brevis ATCC 367 |
5
HrcA
Lactobacillus casei ATCC 334 |
5
HrcA
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 |
4
HrcA
Lactobacillus fermentum IFO 3956 |
5
HrcA
Lactobacillus helveticus DPC 4571 |
6
HrcA
Lactobacillus johnsonii NCC 533 |
3
HrcA
Lactobacillus plantarum WCFS1 |
4
HrcA
Lactobacillus reuteri JCM 1112 |
5
HrcA
Lactobacillus rhamnosus GG |
4
HrcA
Lactobacillus sakei subsp. sakei 23K |
2
HrcA
Lactobacillus salivarius subsp. salivarius UCC118 |
4
HrcA
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 |
3
HrcA
Pediococcus pentosaceus ATCC 25745 |
Heat shock response | |
LacI | TF | BfrR |
1
BfrR
Lactobacillus acidophilus NCFM |
Fructooligosaccharides utilization | ||||||||||||||
TF | CcpA |
37
CcpA
Lactobacillus acidophilus NCFM |
32
CcpA
Lactobacillus brevis ATCC 367 |
31
CcpA
Lactobacillus casei ATCC 334 |
5
CcpA
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 |
30
CcpA
Lactobacillus fermentum IFO 3956 |
17
CcpA
Lactobacillus helveticus DPC 4571 |
35
CcpA
Lactobacillus johnsonii NCC 533 |
56
CcpA
Lactobacillus plantarum WCFS1 |
29
CcpA
Lactobacillus reuteri JCM 1112 |
29
CcpA
Lactobacillus rhamnosus GG |
29
CcpA
Lactobacillus sakei subsp. sakei 23K |
33
CcpA
Lactobacillus salivarius subsp. salivarius UCC118 |
32
CcpA
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 |
22
CcpA
Oenococcus oeni PSU-1 |
42
CcpA
Pediococcus pentosaceus ATCC 25745 |
Carbon catabolism | |
TF | CcpB |
1
CcpB
Lactobacillus casei ATCC 334 |
1
CcpB
Lactobacillus plantarum WCFS1 |
1
CcpB
Lactobacillus rhamnosus GG |
1
CcpB
Lactobacillus sakei subsp. sakei 23K |
unknown | ||||||||||||
TF | ExuR |
1
ExuR
Lactobacillus brevis ATCC 367 |
1
ExuR
Lactobacillus sakei subsp. sakei 23K |
Glucuronate utilization; Galacturonate utilization | ||||||||||||||
TF | GalR |
3
GalR
Lactobacillus brevis ATCC 367 |
1
GalR
Lactobacillus casei ATCC 334 |
1
GalR
Lactobacillus fermentum IFO 3956 |
3
GalR
Lactobacillus plantarum WCFS1 |
4
GalR
Lactobacillus reuteri JCM 1112 |
1
GalR
Lactobacillus rhamnosus GG |
3
GalR
Lactobacillus sakei subsp. sakei 23K |
3
GalR
Lactobacillus salivarius subsp. salivarius UCC118 |
1
GalR
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 |
1
GalR
Oenococcus oeni PSU-1 |
5
GalR
Pediococcus pentosaceus ATCC 25745 |
Galactosides utilization; Galactose utilization | |||||
TF | GntR2 |
1
GntR2
Lactobacillus fermentum IFO 3956 |
1
GntR2
Lactobacillus reuteri JCM 1112 |
Gluconate utilization | ||||||||||||||
TF | HxlR |
1
HxlR
Lactobacillus brevis ATCC 367 |
1
HxlR
Oenococcus oeni PSU-1 |
Hexulose metabolism | ||||||||||||||
TF | LBA1472 |
2
LBA1472
Lactobacillus acidophilus NCFM |
2
LBA1472
Lactobacillus johnsonii NCC 533 |
Sugar utilization | ||||||||||||||
TF | LJ1265 |
2
LJ1265
Lactobacillus acidophilus NCFM |
2
LJ1265
Lactobacillus johnsonii NCC 533 |
Pentose utilization | ||||||||||||||
TF | LSEI_0368 |
2
LSEI_0368
Lactobacillus casei ATCC 334 |
2
LSEI_0368
Lactobacillus rhamnosus GG |
Sugar utilization | ||||||||||||||
TF | LacR |
1
LacR
Lactobacillus acidophilus NCFM |
2
LacR
Lactobacillus fermentum IFO 3956 |
1
LacR
Lactobacillus helveticus DPC 4571 |
2
LacR
Lactobacillus johnsonii NCC 533 |
2
LacR
Lactobacillus plantarum WCFS1 |
1
LacR
Lactobacillus reuteri JCM 1112 |
2
LacR
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 |
Lactose utilization | |||||||||
TF | Lp_3221 |
2
Lp_3221
Lactobacillus casei ATCC 334 |
2
Lp_3221
Lactobacillus plantarum WCFS1 |
2
Lp_3221
Lactobacillus rhamnosus GG |
Sugar utilization | |||||||||||||
TF | MalR |
1
MalR
Lactobacillus brevis ATCC 367 |
1
MalR
Lactobacillus fermentum IFO 3956 |
3
MalR
Lactobacillus plantarum WCFS1 |
1
MalR
Lactobacillus reuteri JCM 1112 |
1
MalR
Lactobacillus salivarius subsp. salivarius UCC118 |
2
MalR
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 |
1
MalR
Pediococcus pentosaceus ATCC 25745 |
Maltose utilization; Maltodextrin utilization | |||||||||
TF | MalR3 |
2
MalR3
Lactobacillus brevis ATCC 367 |
2
MalR3
Lactobacillus fermentum IFO 3956 |
4
MalR3
Lactobacillus plantarum WCFS1 |
2
MalR3
Lactobacillus reuteri JCM 1112 |
3
MalR3
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 |
2
MalR3
Oenococcus oeni PSU-1 |
Maltose utilization; Maltodextrin utilization | ||||||||||
TF | MdxR |
2
MdxR
Lactobacillus acidophilus NCFM |
2
MdxR
Lactobacillus casei ATCC 334 |
1
MdxR
Lactobacillus helveticus DPC 4571 |
2
MdxR
Lactobacillus johnsonii NCC 533 |
2
MdxR
Lactobacillus plantarum WCFS1 |
2
MdxR
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 |
Maltose utilization; Maltodextrin utilization | ||||||||||
TF | NigR |
2
NigR
Lactobacillus johnsonii NCC 533 |
2
NigR
Lactobacillus salivarius subsp. salivarius UCC118 |
Nigerose utilization | ||||||||||||||
TF | OglR2 |
1
OglR2
Lactobacillus casei ATCC 334 |
Oligoglucoside utilization | |||||||||||||||
TF | RbsR |
3
RbsR
Lactobacillus brevis ATCC 367 |
1
RbsR
Lactobacillus casei ATCC 334 |
3
RbsR
Lactobacillus fermentum IFO 3956 |
1
RbsR
Lactobacillus plantarum WCFS1 |
1
RbsR
Lactobacillus reuteri JCM 1112 |
1
RbsR
Lactobacillus rhamnosus GG |
1
RbsR
Lactobacillus sakei subsp. sakei 23K |
2
RbsR
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 |
2
RbsR
Oenococcus oeni PSU-1 |
1
RbsR
Pediococcus pentosaceus ATCC 25745 |
Ribose utilization | ||||||
TF | ScrR |
2
ScrR
Lactobacillus acidophilus NCFM |
2
ScrR
Lactobacillus fermentum IFO 3956 |
2
ScrR
Lactobacillus johnsonii NCC 533 |
2
ScrR
Lactobacillus plantarum WCFS1 |
2
ScrR
Lactobacillus sakei subsp. sakei 23K |
2
ScrR
Lactobacillus salivarius subsp. salivarius UCC118 |
2
ScrR
Pediococcus pentosaceus ATCC 25745 |
Sucrose utilization | |||||||||
TF | ScrR2 |
2
ScrR2
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 |
Sucrose utilization | |||||||||||||||
LexA | TF | LexA |
4
LexA
Lactobacillus acidophilus NCFM |
8
LexA
Lactobacillus brevis ATCC 367 |
9
LexA
Lactobacillus casei ATCC 334 |
4
LexA
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 |
5
LexA
Lactobacillus fermentum IFO 3956 |
5
LexA
Lactobacillus helveticus DPC 4571 |
4
LexA
Lactobacillus johnsonii NCC 533 |
9
LexA
Lactobacillus plantarum WCFS1 |
6
LexA
Lactobacillus reuteri JCM 1112 |
9
LexA
Lactobacillus rhamnosus GG |
6
LexA
Lactobacillus sakei subsp. sakei 23K |
2
LexA
Lactobacillus salivarius subsp. salivarius UCC118 |
8
LexA
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 |
6
LexA
Oenococcus oeni PSU-1 |
6
LexA
Pediococcus pentosaceus ATCC 25745 |
SOS response |
LysR | TF | MleR |
1
MleR
Lactobacillus acidophilus NCFM |
2
MleR
Lactobacillus brevis ATCC 367 |
2
MleR
Lactobacillus casei ATCC 334 |
2
MleR
Lactobacillus plantarum WCFS1 |
2
MleR
Lactobacillus reuteri JCM 1112 |
2
MleR
Lactobacillus rhamnosus GG |
2
MleR
Lactobacillus sakei subsp. sakei 23K |
2
MleR
Lactobacillus salivarius subsp. salivarius UCC118 |
2
MleR
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 |
2
MleR
Oenococcus oeni PSU-1 |
2
MleR
Pediococcus pentosaceus ATCC 25745 |
Malate utilization | ||||
TF | MtaR |
2
MtaR
Lactobacillus plantarum WCFS1 |
Methionine biosynthesis | |||||||||||||||
MarR | TF | AdcR |
1
AdcR
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 |
Zinc homeostasis | ||||||||||||||
TF | FabT |
1
FabT
Lactobacillus brevis ATCC 367 |
1
FabT
Lactobacillus casei ATCC 334 |
1
FabT
Lactobacillus fermentum IFO 3956 |
1
FabT
Lactobacillus helveticus DPC 4571 |
2
FabT
Lactobacillus reuteri JCM 1112 |
2
FabT
Lactobacillus rhamnosus GG |
1
FabT
Lactobacillus salivarius subsp. salivarius UCC118 |
1
FabT
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 |
1
FabT
Oenococcus oeni PSU-1 |
Fatty acid biosynthesis | |||||||
TF | LBA0573 |
1
LBA0573
Lactobacillus acidophilus NCFM |
1
LBA0573
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 |
1
LBA0573
Lactobacillus helveticus DPC 4571 |
1
LBA0573
Lactobacillus salivarius subsp. salivarius UCC118 |
Multidrug resistance | ||||||||||||
TF | YybA |
1
YybA
Lactobacillus acidophilus NCFM |
1
YybA
Lactobacillus johnsonii NCC 533 |
unknown | ||||||||||||||
MerR | TF | GlnR |
3
GlnR
Lactobacillus brevis ATCC 367 |
4
GlnR
Lactobacillus casei ATCC 334 |
4
GlnR
Lactobacillus plantarum WCFS1 |
4
GlnR
Lactobacillus rhamnosus GG |
1
GlnR
Lactobacillus sakei subsp. sakei 23K |
5
GlnR
Lactobacillus salivarius subsp. salivarius UCC118 |
4
GlnR
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 |
2
GlnR
Oenococcus oeni PSU-1 |
2
GlnR
Pediococcus pentosaceus ATCC 25745 |
Nitrogen assimilation | ||||||
NiaR | TF | NiaR |
1
NiaR
Lactobacillus casei ATCC 334 |
2
NiaR
Lactobacillus plantarum WCFS1 |
1
NiaR
Lactobacillus rhamnosus GG |
1
NiaR
Lactobacillus sakei subsp. sakei 23K |
2
NiaR
Pediococcus pentosaceus ATCC 25745 |
NAD biosynthesis | ||||||||||
NrdR | TF | NrdR |
4
NrdR
Lactobacillus acidophilus NCFM |
5
NrdR
Lactobacillus brevis ATCC 367 |
5
NrdR
Lactobacillus casei ATCC 334 |
3
NrdR
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 |
3
NrdR
Lactobacillus fermentum IFO 3956 |
4
NrdR
Lactobacillus helveticus DPC 4571 |
3
NrdR
Lactobacillus johnsonii NCC 533 |
5
NrdR
Lactobacillus plantarum WCFS1 |
4
NrdR
Lactobacillus reuteri JCM 1112 |
5
NrdR
Lactobacillus rhamnosus GG |
3
NrdR
Lactobacillus sakei subsp. sakei 23K |
2
NrdR
Lactobacillus salivarius subsp. salivarius UCC118 |
4
NrdR
Pediococcus pentosaceus ATCC 25745 |
Deoxyribonucleotide biosynthesis | ||
NrtR | TF | NrtR |
1
NrtR
Lactobacillus casei ATCC 334 |
1
NrtR
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 |
1
NrtR
Lactobacillus fermentum IFO 3956 |
1
NrtR
Lactobacillus helveticus DPC 4571 |
1
NrtR
Lactobacillus plantarum WCFS1 |
1
NrtR
Lactobacillus reuteri JCM 1112 |
1
NrtR
Lactobacillus rhamnosus GG |
1
NrtR
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 |
NAD biosynthesis | |||||||
PadR | TF | PadR |
2
PadR
Lactobacillus brevis ATCC 367 |
2
PadR
Lactobacillus plantarum WCFS1 |
1
PadR
Lactobacillus sakei subsp. sakei 23K |
1
PadR
Pediococcus pentosaceus ATCC 25745 |
Phenolic acid stress response | |||||||||||
TF | YwzG |
1
YwzG
Lactobacillus brevis ATCC 367 |
1
YwzG
Lactobacillus plantarum WCFS1 |
1
YwzG
Lactobacillus reuteri JCM 1112 |
1
YwzG
Lactobacillus salivarius subsp. salivarius UCC118 |
1
YwzG
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 |
1
YwzG
Pediococcus pentosaceus ATCC 25745 |
Transport | ||||||||||
PurR | TF | PurR |
7
PurR
Lactobacillus acidophilus NCFM |
4
PurR
Lactobacillus brevis ATCC 367 |
5
PurR
Lactobacillus casei ATCC 334 |
4
PurR
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 |
5
PurR
Lactobacillus fermentum IFO 3956 |
5
PurR
Lactobacillus helveticus DPC 4571 |
5
PurR
Lactobacillus johnsonii NCC 533 |
5
PurR
Lactobacillus plantarum WCFS1 |
3
PurR
Lactobacillus reuteri JCM 1112 |
5
PurR
Lactobacillus rhamnosus GG |
6
PurR
Lactobacillus sakei subsp. sakei 23K |
4
PurR
Lactobacillus salivarius subsp. salivarius UCC118 |
3
PurR
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 |
2
PurR
Oenococcus oeni PSU-1 |
6
PurR
Pediococcus pentosaceus ATCC 25745 |
Purine metabolism |
ROK | TF | XylR |
6
XylR
Lactobacillus brevis ATCC 367 |
3
XylR
Lactobacillus fermentum IFO 3956 |
2
XylR
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 |
2
XylR
Pediococcus pentosaceus ATCC 25745 |
Xylose utilization | |||||||||||
Rex | TF | Rex |
3
Rex
Lactobacillus acidophilus NCFM |
6
Rex
Lactobacillus brevis ATCC 367 |
3
Rex
Lactobacillus casei ATCC 334 |
2
Rex
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 |
4
Rex
Lactobacillus fermentum IFO 3956 |
2
Rex
Lactobacillus helveticus DPC 4571 |
2
Rex
Lactobacillus johnsonii NCC 533 |
3
Rex
Lactobacillus plantarum WCFS1 |
5
Rex
Lactobacillus reuteri JCM 1112 |
3
Rex
Lactobacillus rhamnosus GG |
6
Rex
Lactobacillus sakei subsp. sakei 23K |
3
Rex
Lactobacillus salivarius subsp. salivarius UCC118 |
5
Rex
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 |
3
Rex
Oenococcus oeni PSU-1 |
3
Rex
Pediococcus pentosaceus ATCC 25745 |
Energy metabolism |
RpiR | TF | AguR |
1
AguR
Lactobacillus brevis ATCC 367 |
1
AguR
Lactobacillus sakei subsp. sakei 23K |
1
AguR
Pediococcus pentosaceus ATCC 25745 |
Agmatine utilization | ||||||||||||
TF | GntR1 |
4
GntR1
Lactobacillus brevis ATCC 367 |
2
GntR1
Lactobacillus casei ATCC 334 |
1
GntR1
Lactobacillus plantarum WCFS1 |
2
GntR1
Lactobacillus rhamnosus GG |
2
GntR1
Lactobacillus sakei subsp. sakei 23K |
2
GntR1
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 |
2
GntR1
Oenococcus oeni PSU-1 |
2
GntR1
Pediococcus pentosaceus ATCC 25745 |
Gluconate utilization | ||||||||
TF | MurR |
1
MurR
Lactobacillus acidophilus NCFM |
1
MurR
Lactobacillus johnsonii NCC 533 |
1
MurR
Lactobacillus plantarum WCFS1 |
1
MurR
Pediococcus pentosaceus ATCC 25745 |
N-acetylmuramate utilization | ||||||||||||
TF | RpiR |
2
RpiR
Lactobacillus acidophilus NCFM |
2
RpiR
Lactobacillus casei ATCC 334 |
1
RpiR
Lactobacillus helveticus DPC 4571 |
2
RpiR
Lactobacillus salivarius subsp. salivarius UCC118 |
Sugar utilization | ||||||||||||
TF | TagR |
2
TagR
Lactobacillus casei ATCC 334 |
2
TagR
Lactobacillus johnsonii NCC 533 |
2
TagR
Lactobacillus rhamnosus GG |
2
TagR
Pediococcus pentosaceus ATCC 25745 |
Tagatose utilization | ||||||||||||
SdaR | TF | SdaR |
2
SdaR
Lactobacillus brevis ATCC 367 |
2
SdaR
Lactobacillus reuteri JCM 1112 |
1
SdaR
Lactobacillus sakei subsp. sakei 23K |
Glycerate utilization | ||||||||||||
SorC | TF | CggR |
1
CggR
Lactobacillus acidophilus NCFM |
1
CggR
Lactobacillus brevis ATCC 367 |
1
CggR
Lactobacillus casei ATCC 334 |
1
CggR
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 |
1
CggR
Lactobacillus helveticus DPC 4571 |
1
CggR
Lactobacillus johnsonii NCC 533 |
1
CggR
Lactobacillus plantarum WCFS1 |
1
CggR
Lactobacillus rhamnosus GG |
1
CggR
Lactobacillus sakei subsp. sakei 23K |
1
CggR
Lactobacillus salivarius subsp. salivarius UCC118 |
1
CggR
Pediococcus pentosaceus ATCC 25745 |
Glycolysis | ||||
TF | DeoR |
1
DeoR
Lactobacillus brevis ATCC 367 |
2
DeoR
Lactobacillus fermentum IFO 3956 |
1
DeoR
Lactobacillus plantarum WCFS1 |
2
DeoR
Lactobacillus reuteri JCM 1112 |
1
DeoR
Lactobacillus sakei subsp. sakei 23K |
Deoxynucleoside utilization | |||||||||||
TetR | TF | FatR |
1
FatR
Lactobacillus casei ATCC 334 |
1
FatR
Lactobacillus rhamnosus GG |
3
FatR
Oenococcus oeni PSU-1 |
Toxic fatty acid stress response | ||||||||||||
TF | FlrR |
2
FlrR
Lactobacillus brevis ATCC 367 |
2
FlrR
Lactobacillus plantarum WCFS1 |
2
FlrR
Lactobacillus sakei subsp. sakei 23K |
Drug resistance | |||||||||||||
TF | LBA1638 |
1
LBA1638
Lactobacillus acidophilus NCFM |
1
LBA1638
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 |
1
LBA1638
Lactobacillus helveticus DPC 4571 |
1
LBA1638
Lactobacillus johnsonii NCC 533 |
Transport | ||||||||||||
TF | LSEI_0081 |
2
LSEI_0081
Lactobacillus casei ATCC 334 |
2
LSEI_0081
Lactobacillus rhamnosus GG |
2
LSEI_0081
Oenococcus oeni PSU-1 |
Transport | |||||||||||||
TF | YxeR |
1
YxeR
Lactobacillus acidophilus NCFM |
1
YxeR
Lactobacillus brevis ATCC 367 |
1
YxeR
Lactobacillus casei ATCC 334 |
1
YxeR
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 |
1
YxeR
Lactobacillus fermentum IFO 3956 |
1
YxeR
Lactobacillus helveticus DPC 4571 |
1
YxeR
Lactobacillus johnsonii NCC 533 |
1
YxeR
Lactobacillus reuteri JCM 1112 |
1
YxeR
Lactobacillus rhamnosus GG |
1
YxeR
Oenococcus oeni PSU-1 |
1
YxeR
Pediococcus pentosaceus ATCC 25745 |
Antibiotic resistance | |||||
RF00050 | RNA | FMN |
1
FMN
Lactobacillus acidophilus NCFM |
2
FMN
Lactobacillus brevis ATCC 367 |
1
FMN
Lactobacillus casei ATCC 334 |
1
FMN
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 |
2
FMN
Lactobacillus fermentum IFO 3956 |
1
FMN
Lactobacillus helveticus DPC 4571 |
1
FMN
Lactobacillus johnsonii NCC 533 |
1
FMN
Lactobacillus plantarum WCFS1 |
1
FMN
Lactobacillus reuteri JCM 1112 |
1
FMN
Lactobacillus rhamnosus GG |
1
FMN
Lactobacillus sakei subsp. sakei 23K |
1
FMN
Lactobacillus salivarius subsp. salivarius UCC118 |
2
FMN
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 |
1
FMN
Oenococcus oeni PSU-1 |
2
FMN
Pediococcus pentosaceus ATCC 25745 |
Riboflavin biosynthesis |
RF00059 | RNA | TPP |
1
TPP
Lactobacillus acidophilus NCFM |
2
TPP
Lactobacillus brevis ATCC 367 |
2
TPP
Lactobacillus casei ATCC 334 |
2
TPP
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 |
3
TPP
Lactobacillus fermentum IFO 3956 |
1
TPP
Lactobacillus johnsonii NCC 533 |
2
TPP
Lactobacillus plantarum WCFS1 |
3
TPP
Lactobacillus reuteri JCM 1112 |
2
TPP
Lactobacillus rhamnosus GG |
3
TPP
Lactobacillus sakei subsp. sakei 23K |
1
TPP
Lactobacillus salivarius subsp. salivarius UCC118 |
8
TPP
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 |
2
TPP
Oenococcus oeni PSU-1 |
3
TPP
Pediococcus pentosaceus ATCC 25745 |
Thiamine biosynthesis | |
RF00080 | RNA | yybP-ykoY |
2
yybP-ykoY
Lactobacillus acidophilus NCFM |
1
yybP-ykoY
Lactobacillus brevis ATCC 367 |
1
yybP-ykoY
Lactobacillus casei ATCC 334 |
1
yybP-ykoY
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 |
2
yybP-ykoY
Lactobacillus johnsonii NCC 533 |
1
yybP-ykoY
Lactobacillus plantarum WCFS1 |
1
yybP-ykoY
Lactobacillus rhamnosus GG |
1
yybP-ykoY
Lactobacillus sakei subsp. sakei 23K |
1
yybP-ykoY
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 |
1
yybP-ykoY
Oenococcus oeni PSU-1 |
1
yybP-ykoY
Pediococcus pentosaceus ATCC 25745 |
|||||
RF00114 | RNA | S15 |
1
S15
Lactobacillus brevis ATCC 367 |
1
S15
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 |
1
S15
Lactobacillus johnsonii NCC 533 |
1
S15
Lactobacillus reuteri JCM 1112 |
1
S15
Lactobacillus sakei subsp. sakei 23K |
1
S15
Lactobacillus salivarius subsp. salivarius UCC118 |
1
S15
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 |
1
S15
Oenococcus oeni PSU-1 |
1
S15
Pediococcus pentosaceus ATCC 25745 |
Ribosome biogenesis | ||||||
RF00162 | RNA | SAM |
1
SAM
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 |
1
SAM
Oenococcus oeni PSU-1 |
Methionine biosynthesis | |||||||||||||
RF00167 | RNA | Purine |
2
Purine
Lactobacillus acidophilus NCFM |
1
Purine
Lactobacillus brevis ATCC 367 |
1
Purine
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 |
1
Purine
Lactobacillus fermentum IFO 3956 |
2
Purine
Lactobacillus helveticus DPC 4571 |
2
Purine
Lactobacillus johnsonii NCC 533 |
2
Purine
Lactobacillus plantarum WCFS1 |
1
Purine
Lactobacillus reuteri JCM 1112 |
1
Purine
Lactobacillus salivarius subsp. salivarius UCC118 |
2
Purine
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 |
2
Purine
Oenococcus oeni PSU-1 |
1
Purine
Pediococcus pentosaceus ATCC 25745 |
Purine metabolism | |||
RF00168 | RNA | Lysine |
2
Lysine
Lactobacillus acidophilus NCFM |
1
Lysine
Lactobacillus brevis ATCC 367 |
2
Lysine
Lactobacillus casei ATCC 334 |
1
Lysine
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 |
2
Lysine
Lactobacillus fermentum IFO 3956 |
2
Lysine
Lactobacillus helveticus DPC 4571 |
1
Lysine
Lactobacillus johnsonii NCC 533 |
1
Lysine
Lactobacillus plantarum WCFS1 |
2
Lysine
Lactobacillus reuteri JCM 1112 |
2
Lysine
Lactobacillus rhamnosus GG |
1
Lysine
Lactobacillus sakei subsp. sakei 23K |
1
Lysine
Lactobacillus salivarius subsp. salivarius UCC118 |
3
Lysine
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 |
2
Lysine
Oenococcus oeni PSU-1 |
2
Lysine
Pediococcus pentosaceus ATCC 25745 |
Lysine biosynthesis |
RF00174 | RNA | Cobalamin |
1
Cobalamin
Lactobacillus helveticus DPC 4571 |
Cobalamin biosynthesis | ||||||||||||||
RF00230 | RNA | T-box(Ala) |
1
T-box(Ala)
Lactobacillus acidophilus NCFM |
1
T-box(Ala)
Lactobacillus brevis ATCC 367 |
1
T-box(Ala)
Lactobacillus casei ATCC 334 |
1
T-box(Ala)
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 |
1
T-box(Ala)
Lactobacillus fermentum IFO 3956 |
1
T-box(Ala)
Lactobacillus helveticus DPC 4571 |
1
T-box(Ala)
Lactobacillus johnsonii NCC 533 |
1
T-box(Ala)
Lactobacillus plantarum WCFS1 |
1
T-box(Ala)
Lactobacillus reuteri JCM 1112 |
1
T-box(Ala)
Lactobacillus rhamnosus GG |
1
T-box(Ala)
Lactobacillus sakei subsp. sakei 23K |
1
T-box(Ala)
Lactobacillus salivarius subsp. salivarius UCC118 |
1
T-box(Ala)
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 |
1
T-box(Ala)
Oenococcus oeni PSU-1 |
1
T-box(Ala)
Pediococcus pentosaceus ATCC 25745 |
Amino acid metabolism |
RNA | T-box(Arg) |
1
T-box(Arg)
Lactobacillus acidophilus NCFM |
2
T-box(Arg)
Lactobacillus brevis ATCC 367 |
1
T-box(Arg)
Lactobacillus casei ATCC 334 |
1
T-box(Arg)
Lactobacillus fermentum IFO 3956 |
1
T-box(Arg)
Lactobacillus helveticus DPC 4571 |
1
T-box(Arg)
Lactobacillus johnsonii NCC 533 |
1
T-box(Arg)
Lactobacillus plantarum WCFS1 |
1
T-box(Arg)
Lactobacillus reuteri JCM 1112 |
1
T-box(Arg)
Lactobacillus rhamnosus GG |
1
T-box(Arg)
Lactobacillus sakei subsp. sakei 23K |
1
T-box(Arg)
Lactobacillus salivarius subsp. salivarius UCC118 |
1
T-box(Arg)
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 |
1
T-box(Arg)
Pediococcus pentosaceus ATCC 25745 |
Amino acid metabolism | |||
RNA | T-box(Asn) |
2
T-box(Asn)
Lactobacillus acidophilus NCFM |
2
T-box(Asn)
Lactobacillus brevis ATCC 367 |
1
T-box(Asn)
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 |
1
T-box(Asn)
Lactobacillus fermentum IFO 3956 |
2
T-box(Asn)
Lactobacillus helveticus DPC 4571 |
1
T-box(Asn)
Lactobacillus johnsonii NCC 533 |
1
T-box(Asn)
Lactobacillus plantarum WCFS1 |
1
T-box(Asn)
Lactobacillus reuteri JCM 1112 |
2
T-box(Asn)
Pediococcus pentosaceus ATCC 25745 |
Amino acid metabolism | |||||||
RNA | T-box(Asp) |
1
T-box(Asp)
Lactobacillus acidophilus NCFM |
1
T-box(Asp)
Lactobacillus brevis ATCC 367 |
1
T-box(Asp)
Lactobacillus casei ATCC 334 |
1
T-box(Asp)
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 |
1
T-box(Asp)
Lactobacillus fermentum IFO 3956 |
1
T-box(Asp)
Lactobacillus helveticus DPC 4571 |
2
T-box(Asp)
Lactobacillus johnsonii NCC 533 |
1
T-box(Asp)
Lactobacillus plantarum WCFS1 |
2
T-box(Asp)
Lactobacillus reuteri JCM 1112 |
1
T-box(Asp)
Lactobacillus rhamnosus GG |
1
T-box(Asp)
Lactobacillus sakei subsp. sakei 23K |
1
T-box(Asp)
Lactobacillus salivarius subsp. salivarius UCC118 |
1
T-box(Asp)
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 |
1
T-box(Asp)
Pediococcus pentosaceus ATCC 25745 |
Amino acid metabolism | ||
RNA | T-box(Cys) |
1
T-box(Cys)
Lactobacillus sakei subsp. sakei 23K |
Amino acid metabolism | |||||||||||||||
RNA | T-box(Gly) |
1
T-box(Gly)
Lactobacillus acidophilus NCFM |
1
T-box(Gly)
Lactobacillus brevis ATCC 367 |
1
T-box(Gly)
Lactobacillus casei ATCC 334 |
1
T-box(Gly)
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 |
1
T-box(Gly)
Lactobacillus fermentum IFO 3956 |
1
T-box(Gly)
Lactobacillus helveticus DPC 4571 |
1
T-box(Gly)
Lactobacillus johnsonii NCC 533 |
1
T-box(Gly)
Lactobacillus plantarum WCFS1 |
1
T-box(Gly)
Lactobacillus reuteri JCM 1112 |
1
T-box(Gly)
Lactobacillus rhamnosus GG |
1
T-box(Gly)
Lactobacillus sakei subsp. sakei 23K |
1
T-box(Gly)
Lactobacillus salivarius subsp. salivarius UCC118 |
1
T-box(Gly)
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 |
1
T-box(Gly)
Oenococcus oeni PSU-1 |
1
T-box(Gly)
Pediococcus pentosaceus ATCC 25745 |
Amino acid metabolism | |
RNA | T-box(His) |
1
T-box(His)
Lactobacillus casei ATCC 334 |
1
T-box(His)
Lactobacillus fermentum IFO 3956 |
1
T-box(His)
Lactobacillus plantarum WCFS1 |
1
T-box(His)
Lactobacillus rhamnosus GG |
Amino acid metabolism | ||||||||||||
RNA | T-box(Ile) |
4
T-box(Ile)
Lactobacillus acidophilus NCFM |
3
T-box(Ile)
Lactobacillus brevis ATCC 367 |
1
T-box(Ile)
Lactobacillus casei ATCC 334 |
1
T-box(Ile)
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 |
2
T-box(Ile)
Lactobacillus fermentum IFO 3956 |
2
T-box(Ile)
Lactobacillus helveticus DPC 4571 |
3
T-box(Ile)
Lactobacillus johnsonii NCC 533 |
2
T-box(Ile)
Lactobacillus plantarum WCFS1 |
2
T-box(Ile)
Lactobacillus reuteri JCM 1112 |
2
T-box(Ile)
Lactobacillus rhamnosus GG |
1
T-box(Ile)
Lactobacillus sakei subsp. sakei 23K |
2
T-box(Ile)
Lactobacillus salivarius subsp. salivarius UCC118 |
1
T-box(Ile)
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 |
1
T-box(Ile)
Oenococcus oeni PSU-1 |
1
T-box(Ile)
Pediococcus pentosaceus ATCC 25745 |
Amino acid metabolism | |
RNA | T-box(Leu) |
1
T-box(Leu)
Lactobacillus acidophilus NCFM |
2
T-box(Leu)
Lactobacillus brevis ATCC 367 |
1
T-box(Leu)
Lactobacillus casei ATCC 334 |
1
T-box(Leu)
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 |
1
T-box(Leu)
Lactobacillus fermentum IFO 3956 |
1
T-box(Leu)
Lactobacillus helveticus DPC 4571 |
1
T-box(Leu)
Lactobacillus johnsonii NCC 533 |
1
T-box(Leu)
Lactobacillus plantarum WCFS1 |
1
T-box(Leu)
Lactobacillus reuteri JCM 1112 |
1
T-box(Leu)
Lactobacillus rhamnosus GG |
1
T-box(Leu)
Lactobacillus sakei subsp. sakei 23K |
1
T-box(Leu)
Lactobacillus salivarius subsp. salivarius UCC118 |
1
T-box(Leu)
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 |
1
T-box(Leu)
Oenococcus oeni PSU-1 |
1
T-box(Leu)
Pediococcus pentosaceus ATCC 25745 |
Amino acid metabolism | |
RNA | T-box(Lys) |
1
T-box(Lys)
Lactobacillus plantarum WCFS1 |
Amino acid metabolism | |||||||||||||||
RNA | T-box(Met) |
4
T-box(Met)
Lactobacillus acidophilus NCFM |
3
T-box(Met)
Lactobacillus brevis ATCC 367 |
4
T-box(Met)
Lactobacillus casei ATCC 334 |
3
T-box(Met)
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 |
6
T-box(Met)
Lactobacillus fermentum IFO 3956 |
3
T-box(Met)
Lactobacillus helveticus DPC 4571 |
2
T-box(Met)
Lactobacillus johnsonii NCC 533 |
7
T-box(Met)
Lactobacillus plantarum WCFS1 |
6
T-box(Met)
Lactobacillus reuteri JCM 1112 |
4
T-box(Met)
Lactobacillus rhamnosus GG |
1
T-box(Met)
Lactobacillus sakei subsp. sakei 23K |
1
T-box(Met)
Lactobacillus salivarius subsp. salivarius UCC118 |
6
T-box(Met)
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 |
2
T-box(Met)
Oenococcus oeni PSU-1 |
2
T-box(Met)
Pediococcus pentosaceus ATCC 25745 |
Amino acid metabolism | |
RNA | T-box(Phe) |
1
T-box(Phe)
Lactobacillus acidophilus NCFM |
1
T-box(Phe)
Lactobacillus brevis ATCC 367 |
1
T-box(Phe)
Lactobacillus casei ATCC 334 |
1
T-box(Phe)
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 |
1
T-box(Phe)
Lactobacillus fermentum IFO 3956 |
1
T-box(Phe)
Lactobacillus helveticus DPC 4571 |
1
T-box(Phe)
Lactobacillus johnsonii NCC 533 |
1
T-box(Phe)
Lactobacillus plantarum WCFS1 |
1
T-box(Phe)
Lactobacillus reuteri JCM 1112 |
1
T-box(Phe)
Lactobacillus rhamnosus GG |
1
T-box(Phe)
Lactobacillus sakei subsp. sakei 23K |
1
T-box(Phe)
Lactobacillus salivarius subsp. salivarius UCC118 |
1
T-box(Phe)
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 |
1
T-box(Phe)
Oenococcus oeni PSU-1 |
1
T-box(Phe)
Pediococcus pentosaceus ATCC 25745 |
Amino acid metabolism | |
RNA | T-box(Pro) |
1
T-box(Pro)
Lactobacillus casei ATCC 334 |
1
T-box(Pro)
Lactobacillus reuteri JCM 1112 |
1
T-box(Pro)
Lactobacillus rhamnosus GG |
Amino acid metabolism | |||||||||||||
RNA | T-box(Ser) |
1
T-box(Ser)
Lactobacillus acidophilus NCFM |
1
T-box(Ser)
Lactobacillus brevis ATCC 367 |
1
T-box(Ser)
Lactobacillus casei ATCC 334 |
1
T-box(Ser)
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 |
1
T-box(Ser)
Lactobacillus fermentum IFO 3956 |
1
T-box(Ser)
Lactobacillus helveticus DPC 4571 |
1
T-box(Ser)
Lactobacillus johnsonii NCC 533 |
2
T-box(Ser)
Lactobacillus plantarum WCFS1 |
1
T-box(Ser)
Lactobacillus reuteri JCM 1112 |
1
T-box(Ser)
Lactobacillus rhamnosus GG |
1
T-box(Ser)
Lactobacillus sakei subsp. sakei 23K |
1
T-box(Ser)
Lactobacillus salivarius subsp. salivarius UCC118 |
1
T-box(Ser)
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 |
1
T-box(Ser)
Pediococcus pentosaceus ATCC 25745 |
Amino acid metabolism | ||
RNA | T-box(Thr) |
1
T-box(Thr)
Lactobacillus acidophilus NCFM |
1
T-box(Thr)
Lactobacillus brevis ATCC 367 |
1
T-box(Thr)
Lactobacillus casei ATCC 334 |
1
T-box(Thr)
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 |
1
T-box(Thr)
Lactobacillus fermentum IFO 3956 |
1
T-box(Thr)
Lactobacillus helveticus DPC 4571 |
1
T-box(Thr)
Lactobacillus johnsonii NCC 533 |
1
T-box(Thr)
Lactobacillus plantarum WCFS1 |
1
T-box(Thr)
Lactobacillus reuteri JCM 1112 |
1
T-box(Thr)
Lactobacillus rhamnosus GG |
1
T-box(Thr)
Lactobacillus sakei subsp. sakei 23K |
1
T-box(Thr)
Lactobacillus salivarius subsp. salivarius UCC118 |
2
T-box(Thr)
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 |
1
T-box(Thr)
Oenococcus oeni PSU-1 |
1
T-box(Thr)
Pediococcus pentosaceus ATCC 25745 |
Amino acid metabolism | |
RNA | T-box(Trp) |
2
T-box(Trp)
Lactobacillus brevis ATCC 367 |
3
T-box(Trp)
Lactobacillus casei ATCC 334 |
1
T-box(Trp)
Lactobacillus fermentum IFO 3956 |
3
T-box(Trp)
Lactobacillus plantarum WCFS1 |
1
T-box(Trp)
Lactobacillus reuteri JCM 1112 |
1
T-box(Trp)
Lactobacillus rhamnosus GG |
1
T-box(Trp)
Lactobacillus sakei subsp. sakei 23K |
1
T-box(Trp)
Lactobacillus salivarius subsp. salivarius UCC118 |
1
T-box(Trp)
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 |
1
T-box(Trp)
Pediococcus pentosaceus ATCC 25745 |
Amino acid metabolism | ||||||
RNA | T-box(Tyr) |
2
T-box(Tyr)
Lactobacillus acidophilus NCFM |
3
T-box(Tyr)
Lactobacillus brevis ATCC 367 |
1
T-box(Tyr)
Lactobacillus casei ATCC 334 |
2
T-box(Tyr)
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 |
1
T-box(Tyr)
Lactobacillus fermentum IFO 3956 |
2
T-box(Tyr)
Lactobacillus helveticus DPC 4571 |
2
T-box(Tyr)
Lactobacillus johnsonii NCC 533 |
3
T-box(Tyr)
Lactobacillus plantarum WCFS1 |
2
T-box(Tyr)
Lactobacillus reuteri JCM 1112 |
1
T-box(Tyr)
Lactobacillus rhamnosus GG |
2
T-box(Tyr)
Lactobacillus sakei subsp. sakei 23K |
3
T-box(Tyr)
Lactobacillus salivarius subsp. salivarius UCC118 |
2
T-box(Tyr)
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 |
1
T-box(Tyr)
Oenococcus oeni PSU-1 |
2
T-box(Tyr)
Pediococcus pentosaceus ATCC 25745 |
Amino acid metabolism | |
RNA | T-box(Val) |
2
T-box(Val)
Lactobacillus acidophilus NCFM |
2
T-box(Val)
Lactobacillus brevis ATCC 367 |
2
T-box(Val)
Lactobacillus casei ATCC 334 |
1
T-box(Val)
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 |
2
T-box(Val)
Lactobacillus fermentum IFO 3956 |
1
T-box(Val)
Lactobacillus helveticus DPC 4571 |
1
T-box(Val)
Lactobacillus johnsonii NCC 533 |
2
T-box(Val)
Lactobacillus plantarum WCFS1 |
1
T-box(Val)
Lactobacillus reuteri JCM 1112 |
2
T-box(Val)
Lactobacillus rhamnosus GG |
1
T-box(Val)
Lactobacillus sakei subsp. sakei 23K |
1
T-box(Val)
Lactobacillus salivarius subsp. salivarius UCC118 |
1
T-box(Val)
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 |
1
T-box(Val)
Oenococcus oeni PSU-1 |
1
T-box(Val)
Pediococcus pentosaceus ATCC 25745 |
Amino acid metabolism | |
RF00234 | RNA | glmS |
1
glmS
Lactobacillus plantarum WCFS1 |
Amino sugar metabolism | ||||||||||||||
RF00380 | RNA | ykoK |
1
ykoK
Lactobacillus acidophilus NCFM |
1
ykoK
Lactobacillus brevis ATCC 367 |
1
ykoK
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 |
2
ykoK
Lactobacillus helveticus DPC 4571 |
2
ykoK
Lactobacillus johnsonii NCC 533 |
1
ykoK
Lactobacillus plantarum WCFS1 |
1
ykoK
Lactobacillus rhamnosus GG |
1
ykoK
Lactobacillus sakei subsp. sakei 23K |
Magnesium homeostasis | |||||||
RF00442 | RNA | ykkC-yxkD |
1
ykkC-yxkD
Lactobacillus brevis ATCC 367 |
1
ykkC-yxkD
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 |
Multidrug resistance | |||||||||||||
RF00515 | RNA | PyrR |
4
PyrR
Lactobacillus acidophilus NCFM |
4
PyrR
Lactobacillus brevis ATCC 367 |
1
PyrR
Lactobacillus casei ATCC 334 |
4
PyrR
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 |
5
PyrR
Lactobacillus fermentum IFO 3956 |
4
PyrR
Lactobacillus helveticus DPC 4571 |
4
PyrR
Lactobacillus johnsonii NCC 533 |
4
PyrR
Lactobacillus plantarum WCFS1 |
4
PyrR
Lactobacillus reuteri JCM 1112 |
2
PyrR
Lactobacillus rhamnosus GG |
4
PyrR
Lactobacillus sakei subsp. sakei 23K |
2
PyrR
Lactobacillus salivarius subsp. salivarius UCC118 |
1
PyrR
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 |
3
PyrR
Pediococcus pentosaceus ATCC 25745 |
Pyrimidine metabolism | |
RF00522 | RNA | PreQ1 |
2
PreQ1
Lactobacillus plantarum WCFS1 |
2
PreQ1
Lactobacillus sakei subsp. sakei 23K |
2
PreQ1
Lactobacillus salivarius subsp. salivarius UCC118 |
2
PreQ1
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 |
1
PreQ1
Pediococcus pentosaceus ATCC 25745 |
Queuosine biosynthesis | ||||||||||
RF00555 | RNA | L13_leader |
1
L13_leader
Lactobacillus acidophilus NCFM |
1
L13_leader
Lactobacillus brevis ATCC 367 |
1
L13_leader
Lactobacillus casei ATCC 334 |
1
L13_leader
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 |
1
L13_leader
Lactobacillus helveticus DPC 4571 |
1
L13_leader
Lactobacillus johnsonii NCC 533 |
1
L13_leader
Lactobacillus plantarum WCFS1 |
1
L13_leader
Lactobacillus reuteri JCM 1112 |
1
L13_leader
Lactobacillus rhamnosus GG |
1
L13_leader
Lactobacillus sakei subsp. sakei 23K |
1
L13_leader
Lactobacillus salivarius subsp. salivarius UCC118 |
1
L13_leader
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 |
1
L13_leader
Pediococcus pentosaceus ATCC 25745 |
Ribosome biogenesis | ||
RF00556 | RNA | L19_leader |
1
L19_leader
Lactobacillus acidophilus NCFM |
1
L19_leader
Lactobacillus brevis ATCC 367 |
1
L19_leader
Lactobacillus casei ATCC 334 |
1
L19_leader
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 |
1
L19_leader
Lactobacillus fermentum IFO 3956 |
1
L19_leader
Lactobacillus helveticus DPC 4571 |
1
L19_leader
Lactobacillus johnsonii NCC 533 |
1
L19_leader
Lactobacillus plantarum WCFS1 |
1
L19_leader
Lactobacillus reuteri JCM 1112 |
1
L19_leader
Lactobacillus rhamnosus GG |
1
L19_leader
Lactobacillus sakei subsp. sakei 23K |
1
L19_leader
Lactobacillus salivarius subsp. salivarius UCC118 |
1
L19_leader
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 |
1
L19_leader
Pediococcus pentosaceus ATCC 25745 |
Ribosome biogenesis | |
RF00557 | RNA | L10_leader |
1
L10_leader
Lactobacillus acidophilus NCFM |
1
L10_leader
Lactobacillus brevis ATCC 367 |
1
L10_leader
Lactobacillus casei ATCC 334 |
1
L10_leader
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 |
1
L10_leader
Lactobacillus fermentum IFO 3956 |
1
L10_leader
Lactobacillus helveticus DPC 4571 |
1
L10_leader
Lactobacillus johnsonii NCC 533 |
1
L10_leader
Lactobacillus plantarum WCFS1 |
1
L10_leader
Lactobacillus reuteri JCM 1112 |
1
L10_leader
Lactobacillus rhamnosus GG |
1
L10_leader
Lactobacillus sakei subsp. sakei 23K |
1
L10_leader
Lactobacillus salivarius subsp. salivarius UCC118 |
1
L10_leader
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 |
1
L10_leader
Oenococcus oeni PSU-1 |
1
L10_leader
Pediococcus pentosaceus ATCC 25745 |
Ribosome biogenesis |
RF00558 | RNA | L20_leader |
1
L20_leader
Lactobacillus acidophilus NCFM |
1
L20_leader
Lactobacillus brevis ATCC 367 |
1
L20_leader
Lactobacillus casei ATCC 334 |
1
L20_leader
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 |
1
L20_leader
Lactobacillus fermentum IFO 3956 |
1
L20_leader
Lactobacillus helveticus DPC 4571 |
1
L20_leader
Lactobacillus johnsonii NCC 533 |
1
L20_leader
Lactobacillus plantarum WCFS1 |
1
L20_leader
Lactobacillus reuteri JCM 1112 |
1
L20_leader
Lactobacillus rhamnosus GG |
1
L20_leader
Lactobacillus sakei subsp. sakei 23K |
1
L20_leader
Lactobacillus salivarius subsp. salivarius UCC118 |
1
L20_leader
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 |
1
L20_leader
Oenococcus oeni PSU-1 |
1
L20_leader
Pediococcus pentosaceus ATCC 25745 |
Ribosome biogenesis |
RF00559 | RNA | L21_leader |
1
L21_leader
Lactobacillus acidophilus NCFM |
1
L21_leader
Lactobacillus brevis ATCC 367 |
1
L21_leader
Lactobacillus casei ATCC 334 |
1
L21_leader
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 |
1
L21_leader
Lactobacillus fermentum IFO 3956 |
1
L21_leader
Lactobacillus helveticus DPC 4571 |
1
L21_leader
Lactobacillus johnsonii NCC 533 |
1
L21_leader
Lactobacillus plantarum WCFS1 |
1
L21_leader
Lactobacillus reuteri JCM 1112 |
1
L21_leader
Lactobacillus rhamnosus GG |
1
L21_leader
Lactobacillus sakei subsp. sakei 23K |
1
L21_leader
Lactobacillus salivarius subsp. salivarius UCC118 |
1
L21_leader
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 |
1
L21_leader
Oenococcus oeni PSU-1 |
1
L21_leader
Pediococcus pentosaceus ATCC 25745 |
Ribosome biogenesis |
RF01054 | RNA | preQ1-II |
1
preQ1-II
Lactobacillus casei ATCC 334 |
1
preQ1-II
Lactobacillus rhamnosus GG |
1
preQ1-II
Pediococcus pentosaceus ATCC 25745 |
Queuosine biosynthesis | ||||||||||||
RF01767 | RNA | SMK_box_riboswitch |
1
SMK_box_riboswitch
Lactobacillus acidophilus NCFM |
1
SMK_box_riboswitch
Lactobacillus brevis ATCC 367 |
1
SMK_box_riboswitch
Lactobacillus casei ATCC 334 |
1
SMK_box_riboswitch
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 |
1
SMK_box_riboswitch
Lactobacillus fermentum IFO 3956 |
1
SMK_box_riboswitch
Lactobacillus helveticus DPC 4571 |
1
SMK_box_riboswitch
Lactobacillus johnsonii NCC 533 |
1
SMK_box_riboswitch
Lactobacillus plantarum WCFS1 |
1
SMK_box_riboswitch
Lactobacillus reuteri JCM 1112 |
1
SMK_box_riboswitch
Lactobacillus rhamnosus GG |
1
SMK_box_riboswitch
Lactobacillus sakei subsp. sakei 23K |
1
SMK_box_riboswitch
Lactobacillus salivarius subsp. salivarius UCC118 |
1
SMK_box_riboswitch
Pediococcus pentosaceus ATCC 25745 |
Methionine metabolism | ||
RF01831 | RNA | THF |
1
THF
Lactobacillus brevis ATCC 367 |
1
THF
Lactobacillus casei ATCC 334 |
1
THF
Lactobacillus reuteri JCM 1112 |
1
THF
Lactobacillus rhamnosus GG |
1
THF
Lactobacillus sakei subsp. sakei 23K |
1
THF
Lactobacillus salivarius subsp. salivarius UCC118 |
1
THF
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 |
1
THF
Pediococcus pentosaceus ATCC 25745 |
Folate metabolism |