Regulog FabT - Lactobacillaceae

Member of regulog collections
- By taxonomy - Lactobacillaceae
- By TF family - MarR
- By effector - Long-chain acyl-ACP
- By pathway - Fatty acid biosynthesis
Genome | Genes | Operons |
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Lactobacillus acidophilus NCFM | ||
Lactobacillus brevis ATCC 367 | 13 | 1 |
Lactobacillus casei ATCC 334 | 12 | 1 |
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 | ||
Lactobacillus fermentum IFO 3956 | 12 | 1 |
Lactobacillus helveticus DPC 4571 | 1 | 1 |
Lactobacillus johnsonii NCC 533 | ||
Lactobacillus plantarum WCFS1 | ||
Lactobacillus reuteri JCM 1112 | 13 | 2 |
Lactobacillus rhamnosus GG | 13 | 2 |
Lactobacillus sakei subsp. sakei 23K | ||
Lactobacillus salivarius subsp. salivarius UCC118 | 12 | 1 |
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 | 13 | 1 |
Oenococcus oeni PSU-1 | 13 | 1 |
Pediococcus pentosaceus ATCC 25745 |
Genes | Function | |||||||||||||||
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CRON 1. | ||||||||||||||||
fabA |
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Lactobacillus brevis ATCC 367 Site: position = -206 score = 5.30865 sequence = GGTTTGATATTCAAATT Site: position = -55 score = 6.01465 sequence = AGTTTGAACATCAAATT Gene: LVIS_0937: (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase (EC 4.2.1.-) |
Gene: LSEI_2121: (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase (EC 4.2.1.-) |
Gene: LBUL_1607: (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase (EC 4.2.1.-) |
Gene: LAF_0308: (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase (EC 4.2.1.-) |
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Lactobacillus helveticus DPC 4571 Site: position = -153 score = 5.0529 sequence = AGTTTGATATTCAAACT Gene: lhv_1933: (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase (EC 4.2.1.-) |
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Gene: lp_1670: (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase (EC 4.2.1.-) |
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Lactobacillus reuteri JCM 1112 Site: position = -59 score = 5.58198 sequence = AATTTGATCATCGAATA Gene: LAR_0929: (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase (EC 4.2.1.-) |
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Lactobacillus rhamnosus GG Site: position = -141 score = 5.44446 sequence = GCTTTGAACATCCAATT Gene: LGG_02122: (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase (EC 4.2.1.-) |
Gene: LSA0812: (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase (EC 4.2.1.-) |
Gene: LSL_0449: (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase (EC 4.2.1.-) |
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Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 Site: position = 27 score = 5.50646 sequence = ATTTTGACTATCAGATA Gene: LEUM_0307: (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase (EC 4.2.1.-) |
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Oenococcus oeni PSU-1 Site: position = -294 score = 5.53866 sequence = ATTTTGATCCTTAAATC Gene: OEOE_1595: (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase (EC 4.2.1.-) |
Gene: PEPE_0854: (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase (EC 4.2.1.-) |
(3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase (EC 4.2.1.-) |
fabT |
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Gene: LVIS_0936: Fatty acid biosynthesis transcriptional regulator FabT, MarR family |
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Lactobacillus casei ATCC 334 Site: position = -39 score = 6.04564 sequence = ACTTTGAATATCAAATC Gene: LSEI_2120: Fatty acid biosynthesis transcriptional regulator FabT, MarR family |
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Lactobacillus fermentum IFO 3956 Site: position = -54 score = 5.96591 sequence = ATTTTGATATTCAAATT Gene: LAF_0309: Fatty acid biosynthesis transcriptional regulator FabT, MarR family |
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Lactobacillus reuteri JCM 1112 Site: position = -58 score = 6.32825 sequence = ATTTTGATAATCAAATT Gene: LAR_0928: Fatty acid biosynthesis transcriptional regulator FabT, MarR family |
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Lactobacillus rhamnosus GG Site: position = -39 score = 5.86804 sequence = ACTTTGAGTATCAAATC Gene: LGG_02121: Fatty acid biosynthesis transcriptional regulator FabT, MarR family |
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*
Lactobacillus salivarius subsp. salivarius UCC118 Site: position = -49 score = 6.32825 sequence = ATTTTGATAATCAAATT Gene: LSL_0450: Fatty acid biosynthesis transcriptional regulator FabT, MarR family |
Gene: LEUM_0308: Fatty acid biosynthesis transcriptional regulator FabT, MarR family |
Gene: OEOE_1594: Fatty acid biosynthesis transcriptional regulator FabT, MarR family |
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Fatty acid biosynthesis transcriptional regulator FabT, MarR family |
fabH |
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Gene: LVIS_0935: 3-oxoacyl-[acyl-carrier-protein] synthase, KASIII (EC 2.3.1.41) |
Gene: LSEI_2119: 3-oxoacyl-[acyl-carrier-protein] synthase, KASIII (EC 2.3.1.41) |
Gene: LBUL_0818: 3-oxoacyl-[acyl-carrier-protein] synthase, KASIII (EC 2.3.1.41) |
Gene: LAF_0310: 3-oxoacyl-[acyl-carrier-protein] synthase, KASIII (EC 2.3.1.41) |
Gene: lhv_1932: 3-oxoacyl-[acyl-carrier-protein] synthase, KASIII (EC 2.3.1.41) |
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Gene: lp_1671: 3-oxoacyl-[acyl-carrier-protein] synthase, KASIII (EC 2.3.1.41) |
Gene: LAR_0927: 3-oxoacyl-[acyl-carrier-protein] synthase, KASIII (EC 2.3.1.41) |
Gene: LGG_02120: 3-oxoacyl-[acyl-carrier-protein] synthase, KASIII (EC 2.3.1.41) |
Gene: LSA0813: 3-oxoacyl-[acyl-carrier-protein] synthase, KASIII (EC 2.3.1.41) |
Gene: LSL_0451: 3-oxoacyl-[acyl-carrier-protein] synthase, KASIII (EC 2.3.1.41) |
Gene: LEUM_0309: 3-oxoacyl-[acyl-carrier-protein] synthase, KASIII (EC 2.3.1.41) |
Gene: OEOE_1593: 3-oxoacyl-[acyl-carrier-protein] synthase, KASIII (EC 2.3.1.41) |
Gene: PEPE_0855: 3-oxoacyl-[acyl-carrier-protein] synthase, KASIII (EC 2.3.1.41) |
3-oxoacyl-[acyl-carrier-protein] synthase, KASIII (EC 2.3.1.41) |
acpP |
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Gene: LVIS_0934: Acyl carrier protein |
Gene: LSEI_2118: Acyl carrier protein |
Gene: LBUL_0819: Acyl carrier protein |
Gene: LAF_0311: Acyl carrier protein |
Gene: lhv_1931: Acyl carrier protein |
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Gene: lp_1672: Acyl carrier protein |
Gene: LAR_0926: Acyl carrier protein |
Gene: LGG_02119: Acyl carrier protein |
Gene: LSA0814: Acyl carrier protein |
Gene: LSL_0452: Acyl carrier protein |
Gene: LEUM_0310: Acyl carrier protein |
Gene: OEOE_1592: Acyl carrier protein |
Gene: PEPE_0856: Acyl carrier protein |
Acyl carrier protein |
fabK |
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Gene: LSEI_2117: Enoyl-[acyl-carrier-protein] reductase [FMN] (EC 1.3.1.9) |
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Gene: LGG_02118: Enoyl-[acyl-carrier-protein] reductase [FMN] (EC 1.3.1.9) |
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Gene: LEUM_0311: Enoyl-[acyl-carrier-protein] reductase [FMN] (EC 1.3.1.9) |
Gene: OEOE_1591: Enoyl-[acyl-carrier-protein] reductase [FMN] (EC 1.3.1.9) |
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Enoyl-[acyl-carrier-protein] reductase [FMN] (EC 1.3.1.9) |
fabD |
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Gene: LVIS_0933: Malonyl CoA-acyl carrier protein transacylase (EC 2.3.1.39) |
Gene: LSEI_2116: Malonyl CoA-acyl carrier protein transacylase (EC 2.3.1.39) |
Gene: LBUL_0820: Malonyl CoA-acyl carrier protein transacylase (EC 2.3.1.39) |
Gene: LAF_0312: Malonyl CoA-acyl carrier protein transacylase (EC 2.3.1.39) |
Gene: lhv_1930: Malonyl CoA-acyl carrier protein transacylase (EC 2.3.1.39) |
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Gene: lp_1673: Malonyl CoA-acyl carrier protein transacylase (EC 2.3.1.39) |
Gene: LAR_0925: Malonyl CoA-acyl carrier protein transacylase (EC 2.3.1.39) |
Gene: LGG_02117: Malonyl CoA-acyl carrier protein transacylase (EC 2.3.1.39) |
Gene: LSA0815: Malonyl CoA-acyl carrier protein transacylase (EC 2.3.1.39) |
Gene: LSL_0453: Malonyl CoA-acyl carrier protein transacylase (EC 2.3.1.39) |
Gene: LEUM_0312: Malonyl CoA-acyl carrier protein transacylase (EC 2.3.1.39) |
Gene: OEOE_1590: Malonyl CoA-acyl carrier protein transacylase (EC 2.3.1.39) |
Gene: PEPE_0857: Malonyl CoA-acyl carrier protein transacylase (EC 2.3.1.39) |
Malonyl CoA-acyl carrier protein transacylase (EC 2.3.1.39) |
fabG |
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Gene: LVIS_0932: 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100) |
Gene: LSEI_2115: 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100) |
Gene: LBUL_0821: 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100) |
Gene: LAF_0313: 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100) |
Gene: lhv_1929: 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100) |
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Gene: lp_1674: 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100) |
Gene: LAR_0924: 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100) |
Gene: LGG_02116: 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100) |
Gene: LSA0816: 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100) |
Gene: LSL_0454: 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100) |
Gene: LEUM_0313: 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100) |
Gene: OEOE_1589: 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100) |
Gene: PEPE_0858: 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100) |
3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100) |
fabF |
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Gene: LVIS_0931: 3-oxoacyl-(acyl-carrier-protein) synthase |
Gene: LSEI_2114: 3-oxoacyl-(acyl-carrier-protein) synthase |
Gene: LBUL_0822: 3-oxoacyl-(acyl-carrier-protein) synthase |
Gene: LAF_0314: 3-oxoacyl-(acyl-carrier-protein) synthase |
Gene: lhv_1928: 3-oxoacyl-(acyl-carrier-protein) synthase |
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Gene: lp_1675: 3-oxoacyl-(acyl-carrier-protein) synthase |
Gene: LAR_0923: 3-oxoacyl-(acyl-carrier-protein) synthase |
Gene: LGG_02115: 3-oxoacyl-(acyl-carrier-protein) synthase |
Gene: LSA0817: 3-oxoacyl-(acyl-carrier-protein) synthase |
Gene: LSL_0455: 3-oxoacyl-(acyl-carrier-protein) synthase |
Gene: LEUM_0314: 3-oxoacyl-(acyl-carrier-protein) synthase |
Gene: OEOE_1588: 3-oxoacyl-(acyl-carrier-protein) synthase |
Gene: PEPE_0859: 3-oxoacyl-(acyl-carrier-protein) synthase |
3-oxoacyl-(acyl-carrier-protein) synthase |
accB |
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Gene: LVIS_0930: Biotin carboxyl carrier protein of acetyl-CoA carboxylase (EC 6.4.1.2) |
Gene: LSEI_2113: Biotin carboxyl carrier protein of acetyl-CoA carboxylase (EC 6.4.1.2) |
Gene: LBUL_0823: Biotin carboxyl carrier protein of acetyl-CoA carboxylase (EC 6.4.1.2) |
Gene: LAF_0315: Biotin carboxyl carrier protein of acetyl-CoA carboxylase (EC 6.4.1.2) |
Gene: lhv_1927: Biotin carboxyl carrier protein of acetyl-CoA carboxylase (EC 6.4.1.2) |
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Gene: lp_1676: Biotin carboxyl carrier protein of acetyl-CoA carboxylase (EC 6.4.1.2) |
Gene: LAR_0922: Biotin carboxyl carrier protein of acetyl-CoA carboxylase (EC 6.4.1.2) |
Gene: LGG_02114: Biotin carboxyl carrier protein of acetyl-CoA carboxylase (EC 6.4.1.2) |
Gene: LSA0818: Biotin carboxyl carrier protein of acetyl-CoA carboxylase (EC 6.4.1.2) |
Gene: LSL_0456: Biotin carboxyl carrier protein of acetyl-CoA carboxylase (EC 6.4.1.2) |
Gene: LEUM_0315: Biotin carboxyl carrier protein of acetyl-CoA carboxylase (EC 6.4.1.2) |
Gene: OEOE_1587: Biotin carboxyl carrier protein of acetyl-CoA carboxylase (EC 6.4.1.2) |
Gene: PEPE_0860: Biotin carboxyl carrier protein of acetyl-CoA carboxylase (EC 6.4.1.2) |
Biotin carboxyl carrier protein of acetyl-CoA carboxylase (EC 6.4.1.2) |
fabZ |
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Gene: LVIS_0929: (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase (EC 4.2.1.-) |
Gene: LSEI_2112: (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase (EC 4.2.1.-) |
Gene: LBUL_0824: (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase (EC 4.2.1.-) |
Gene: LAF_0316: (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase (EC 4.2.1.-) |
Gene: lhv_1926: (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase (EC 4.2.1.-) |
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Gene: lp_1677: (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase (EC 4.2.1.-) |
Gene: LAR_0921: (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase (EC 4.2.1.-) |
Gene: LGG_02113: (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase (EC 4.2.1.-) |
Gene: LSA0819: (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase (EC 4.2.1.-) |
Gene: LSL_0457: (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase (EC 4.2.1.-) |
Gene: LEUM_0316: (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase (EC 4.2.1.-) |
Gene: OEOE_1586: (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase (EC 4.2.1.-) |
Gene: PEPE_0861: (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase (EC 4.2.1.-) |
(3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase (EC 4.2.1.-) |
accC |
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Gene: LVIS_0928: Biotin carboxylase of acetyl-CoA carboxylase (EC 6.3.4.14) |
Gene: LSEI_2111: Biotin carboxylase of acetyl-CoA carboxylase (EC 6.3.4.14) |
Gene: LBUL_0825: Biotin carboxylase of acetyl-CoA carboxylase (EC 6.3.4.14) |
Gene: LAF_0317: Biotin carboxylase of acetyl-CoA carboxylase (EC 6.3.4.14) |
Gene: lhv_1925: Biotin carboxylase of acetyl-CoA carboxylase (EC 6.3.4.14) |
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Gene: lp_1678: Biotin carboxylase of acetyl-CoA carboxylase (EC 6.3.4.14) |
Gene: LAR_0920: Biotin carboxylase of acetyl-CoA carboxylase (EC 6.3.4.14) |
Gene: LGG_02112: Biotin carboxylase of acetyl-CoA carboxylase (EC 6.3.4.14) |
Gene: LSA0820: Biotin carboxylase of acetyl-CoA carboxylase (EC 6.3.4.14) |
Gene: LSL_0458: Biotin carboxylase of acetyl-CoA carboxylase (EC 6.3.4.14) |
Gene: LEUM_0317: Biotin carboxylase of acetyl-CoA carboxylase (EC 6.3.4.14) |
Gene: OEOE_1585: Biotin carboxylase of acetyl-CoA carboxylase (EC 6.3.4.14) |
Gene: PEPE_0862: Biotin carboxylase of acetyl-CoA carboxylase (EC 6.3.4.14) |
Biotin carboxylase of acetyl-CoA carboxylase (EC 6.3.4.14) |
accD |
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Gene: LVIS_0927: Acetyl-coenzyme A carboxyl transferase beta chain (EC 6.4.1.2) |
Gene: LSEI_2110: Acetyl-coenzyme A carboxyl transferase beta chain (EC 6.4.1.2) |
Gene: LBUL_0826: Acetyl-coenzyme A carboxyl transferase beta chain (EC 6.4.1.2) |
Gene: LAF_0318: Acetyl-coenzyme A carboxyl transferase beta chain (EC 6.4.1.2) |
Gene: lhv_1924: Acetyl-coenzyme A carboxyl transferase beta chain (EC 6.4.1.2) |
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Gene: lp_1679: Acetyl-coenzyme A carboxyl transferase beta chain (EC 6.4.1.2) |
Gene: LAR_0919: Acetyl-coenzyme A carboxyl transferase beta chain (EC 6.4.1.2) |
Gene: LGG_02111: Acetyl-coenzyme A carboxyl transferase beta chain (EC 6.4.1.2) |
Gene: LSA0821: Acetyl-coenzyme A carboxyl transferase beta chain (EC 6.4.1.2) |
Gene: LSL_0459: Acetyl-coenzyme A carboxyl transferase beta chain (EC 6.4.1.2) |
Gene: LEUM_0318: Acetyl-coenzyme A carboxyl transferase beta chain (EC 6.4.1.2) |
Gene: OEOE_1584: Acetyl-coenzyme A carboxyl transferase beta chain (EC 6.4.1.2) |
Gene: PEPE_0863: Acetyl-coenzyme A carboxyl transferase beta chain (EC 6.4.1.2) |
Acetyl-coenzyme A carboxyl transferase beta chain (EC 6.4.1.2) |
accA |
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Gene: LVIS_0926: Acetyl-coenzyme A carboxyl transferase alpha chain (EC 6.4.1.2) |
Gene: LSEI_2109: Acetyl-coenzyme A carboxyl transferase alpha chain (EC 6.4.1.2) |
Gene: LBUL_0827: Acetyl-coenzyme A carboxyl transferase alpha chain (EC 6.4.1.2) |
Gene: LAF_0319: Acetyl-coenzyme A carboxyl transferase alpha chain (EC 6.4.1.2) |
Gene: lhv_1923: Acetyl-coenzyme A carboxyl transferase alpha chain (EC 6.4.1.2) |
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Gene: lp_1680: Acetyl-coenzyme A carboxyl transferase alpha chain (EC 6.4.1.2) |
Gene: LAR_0918: Acetyl-coenzyme A carboxyl transferase alpha chain (EC 6.4.1.2) |
Gene: LGG_02110: Acetyl-coenzyme A carboxyl transferase alpha chain (EC 6.4.1.2) |
Gene: LSA0822: Acetyl-coenzyme A carboxyl transferase alpha chain (EC 6.4.1.2) |
Gene: LSL_0460: Acetyl-coenzyme A carboxyl transferase alpha chain (EC 6.4.1.2) |
Gene: LEUM_0319: Acetyl-coenzyme A carboxyl transferase alpha chain (EC 6.4.1.2) |
Gene: OEOE_1583: Acetyl-coenzyme A carboxyl transferase alpha chain (EC 6.4.1.2) |
Gene: PEPE_0864: Acetyl-coenzyme A carboxyl transferase alpha chain (EC 6.4.1.2) |
Acetyl-coenzyme A carboxyl transferase alpha chain (EC 6.4.1.2) |
fabI |
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Gene: LVIS_0925: Enoyl-[acyl-carrier-protein] reductase [NADH] (EC 1.3.1.9) |
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Gene: LBUL_0828: Enoyl-[acyl-carrier-protein] reductase [NADH] (EC 1.3.1.9) |
Gene: LAF_0320: Enoyl-[acyl-carrier-protein] reductase [NADH] (EC 1.3.1.9) |
Gene: lhv_1922: Enoyl-[acyl-carrier-protein] reductase [NADH] (EC 1.3.1.9) |
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Gene: lp_1681: Enoyl-[acyl-carrier-protein] reductase [NADH] (EC 1.3.1.9) |
Gene: LAR_0917: Enoyl-[acyl-carrier-protein] reductase [NADH] (EC 1.3.1.9) |
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Gene: LSA0823: Enoyl-[acyl-carrier-protein] reductase [NADH] (EC 1.3.1.9) |
Gene: LSL_0461: Enoyl-[acyl-carrier-protein] reductase [NADH] (EC 1.3.1.9) |
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Gene: PEPE_0865: Enoyl-[acyl-carrier-protein] reductase [NADH] (EC 1.3.1.9) |
Enoyl-[acyl-carrier-protein] reductase [NADH] (EC 1.3.1.9) |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |