Statistics of regulated genes

Genome	Genes	Operons
Oenococcus oeni PSU-1	2	1
Lactobacillus reuteri JCM 1112	3	1
Lactobacillus helveticus DPC 4571	2	1
Lactobacillus fermentum IFO 3956	3	1
Lactobacillus salivarius subsp. salivarius UCC118	3	1
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365	2	1
Lactobacillus acidophilus NCFM	2	1
Lactobacillus johnsonii NCC 533	2	1
Lactobacillus plantarum WCFS1	3	1
Lactobacillus casei ATCC 334	3	1
Lactobacillus brevis ATCC 367	3	1
Lactobacillus sakei subsp. sakei 23K	3	1
Pediococcus pentosaceus ATCC 25745	3	1
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293	2	1
Lactobacillus rhamnosus GG	3	1

Clusters of co-Regulated Orthologous operoNs (CRONs)

Genes																Function
CRON 1.
rplU	* Oenococcus oeni PSU-1 Site: position = -75 score = 38.82 sequence = CAATGCTTCAACCAC... Gene: OEOE_0957: LSU ribosomal protein L21p	* Lactobacillus reuteri JCM 1112 Site: position = -89 score = 50.62 sequence = CCAACAACTACAACC... Gene: LAR_1124: LSU ribosomal protein L21p	* Lactobacillus helveticus DPC 4571 Site: position = -96 score = 57.44 sequence = TCCACATCTGCAACC... Gene: lhv_1424: LSU ribosomal protein L21p	* Lactobacillus fermentum IFO 3956 Site: position = -83 score = 50.39 sequence = CCCACAACTACAACC... Gene: LAF_1269: LSU ribosomal protein L21p	* Lactobacillus salivarius subsp. salivarius UCC118 Site: position = -95 score = 59.04 sequence = ATCACATCTGCAACC... Gene: LSL_0956: LSU ribosomal protein L21p	* Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 Site: position = -94 score = 62.24 sequence = CTCGATTCTGCAACC... Gene: LBUL_1326: LSU ribosomal protein L21p	* Lactobacillus acidophilus NCFM Site: position = -95 score = 61.15 sequence = TCCACATCTGCAACC... Gene: LBA1338: LSU ribosomal protein L21p	* Lactobacillus johnsonii NCC 533 Site: position = -96 score = 60.19 sequence = CTCACATCTGCAACC... Gene: LJ1556: LSU ribosomal protein L21p	* Lactobacillus plantarum WCFS1 Site: position = -95 score = 53.9 sequence = TACAGCTACAACCGC... Gene: lp_1592: LSU ribosomal protein L21p	* Lactobacillus casei ATCC 334 Site: position = -101 score = 45.19 sequence = CCCTCCTATGCAACC... Gene: LSEI_1646: LSU ribosomal protein L21p	* Lactobacillus brevis ATCC 367 Site: position = -99 score = 61.41 sequence = TCCACAGCTGCAACC... Gene: LVIS_0985: LSU ribosomal protein L21p	* Lactobacillus sakei subsp. sakei 23K Site: position = -88 score = 62.63 sequence = CACAGCTGCAACCGC... Gene: LSA0670: LSU ribosomal protein L21p	* Pediococcus pentosaceus ATCC 25745 Site: position = -79 score = 57.93 sequence = CCACGCTACAACCGC... Gene: PEPE_0811: LSU ribosomal protein L21p	* Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 Site: position = -96 score = 46.27 sequence = AGCATAGCTACAACC... Gene: LEUM_1326: LSU ribosomal protein L21p	* Lactobacillus rhamnosus GG Site: position = -100 score = 42.6 sequence = CCCTCCTATGCAACC... Gene: LGG_01690: LSU ribosomal protein L21p	LSU ribosomal protein L21p
ysxB	Oenococcus oeni PSU-1	Lactobacillus reuteri JCM 1112 Gene: LAR_1123: FIG139598: Potential ribosomal protein	Lactobacillus helveticus DPC 4571	Lactobacillus fermentum IFO 3956 Gene: LAF_1268: FIG139598: Potential ribosomal protein	Lactobacillus salivarius subsp. salivarius UCC118 Gene: LSL_0955: FIG139598: Potential ribosomal protein	Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365	Lactobacillus acidophilus NCFM	Lactobacillus johnsonii NCC 533	Lactobacillus plantarum WCFS1 Gene: lp_1593: FIG139598: Potential ribosomal protein	Lactobacillus casei ATCC 334 Gene: LSEI_1645: FIG139598: Potential ribosomal protein	Lactobacillus brevis ATCC 367 Gene: LVIS_0984: FIG139598: Potential ribosomal protein	Lactobacillus sakei subsp. sakei 23K Gene: LSA0671: FIG139598: Potential ribosomal protein	Pediococcus pentosaceus ATCC 25745 Gene: PEPE_0812: FIG139598: Potential ribosomal protein	Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293	Lactobacillus rhamnosus GG Gene: LGG_01689: FIG139598: Potential ribosomal protein	FIG139598: Potential ribosomal protein
rpmA	Oenococcus oeni PSU-1 Gene: OEOE_0958: LSU ribosomal protein L27p	Lactobacillus reuteri JCM 1112 Gene: LAR_1122: LSU ribosomal protein L27p	Lactobacillus helveticus DPC 4571 Gene: lhv_1423: LSU ribosomal protein L27p	Lactobacillus fermentum IFO 3956 Gene: LAF_1267: LSU ribosomal protein L27p	Lactobacillus salivarius subsp. salivarius UCC118 Gene: LSL_0954: LSU ribosomal protein L27p	Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 Gene: LBUL_1325: LSU ribosomal protein L27p	Lactobacillus acidophilus NCFM Gene: LBA1337: LSU ribosomal protein L27p	Lactobacillus johnsonii NCC 533 Gene: LJ1555: LSU ribosomal protein L27p	Lactobacillus plantarum WCFS1 Gene: lp_1594: LSU ribosomal protein L27p	Lactobacillus casei ATCC 334 Gene: LSEI_1644: LSU ribosomal protein L27p	Lactobacillus brevis ATCC 367 Gene: LVIS_0983: LSU ribosomal protein L27p	Lactobacillus sakei subsp. sakei 23K Gene: LSA0672: LSU ribosomal protein L27p	Pediococcus pentosaceus ATCC 25745 Gene: PEPE_0813: LSU ribosomal protein L27p	Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 Gene: LEUM_1325: LSU ribosomal protein L27p	Lactobacillus rhamnosus GG Gene: LGG_01688: LSU ribosomal protein L27p	LSU ribosomal protein L27p

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