Regulon of LexA in Pediococcus pentosaceus ATCC 25745
| Regulator type: | Transcription factor |
| TF locus tag: | PEPE_0870 |
| Regulator family: | LexA |
| Regulation mode: | repressor |
| Biological process: | SOS response |
| Effector: | DNA damage |
| Regulog: | LexA - Lactobacillaceae |
| Statistics of regulated genes: | |
| - Genes | 8 |
| - Operons | 6 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Lactobacillaceae
- By trascription factor - LexA
- By TF family - LexA
- By effector - DNA damage
- By pathway - SOS response
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: 16
Score: 3.9 Sequence: TTGAACATAAGTTGGC
Locus tag: PEPE_1135
Name: uvrC Funciton: Nuclease subunit of the excinuclease complex |
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uvrC
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Nuclease subunit of the excinuclease complex
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Position: -127
Score: 4.9 Sequence: GCGAAAGTATGTTCGG
Locus tag: PEPE_0448
Name: uvrB Funciton: Excinuclease ABC, subunit B
Locus tag: PEPE_0449
Name: uvrA Funciton: Excinuclease ABC, subunit A |
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uvrB
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Excinuclease ABC, subunit B
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uvrA
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Excinuclease ABC, subunit A
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Position: -54
Score: 4.7 Sequence: AAGAACGCATGTTCGT
Position: -27
Score: 5.1 Sequence: ACAAACAAATGTTCGT
Locus tag: PEPE_0824
Name: LJ1544 Funciton: hypothetical protein |
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LJ1544
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hypothetical protein
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Position: -68
Score: 5.1 Sequence: GCGAACATTTGTTTGA
Locus tag: PEPE_0870
Name: lexA Funciton: SOS-response regulator and protease LexA, LexA family (EC 3.4.21.88) |
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lexA
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SOS-response regulator and protease LexA, LexA family (EC 3.4.21.88)
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Position: -84
Score: 4.8 Sequence: TCGAACTTTTGTTCGC
Locus tag: PEPE_1276
Name: recA Funciton: DNA recombinase A |
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recA
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DNA recombinase A
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Position: -41
Score: 5.2 Sequence: AAGAACATATGTTCGT
Locus tag: PEPE_1243
Name: umuC Funciton: UV-damage repair protein
Locus tag: PEPE_1242
Name: LVIS_2094 Funciton: Conserved hypothetical protein |
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umuC
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UV-damage repair protein
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LVIS_2094
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Conserved hypothetical protein
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |