Regulon of GlnR in Lactobacillus casei ATCC 334
| Regulator type: | Transcription factor |
| TF locus tag: | LSEI_1653 |
| Regulator family: | MerR |
| Regulation mode: | repressor |
| Biological process: | Nitrogen assimilation |
| Effector: | Phosphorylated NtrB, signal histidine kinase |
| Regulog: | GlnR - Lactobacillaceae |
| Statistics of regulated genes: | |
| - Genes | 6 |
| - Operons | 4 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Lactobacillaceae
- By TF family - MerR
- By effector - Phosphorylated NtrB, signal histidine kinase
- By pathway - Nitrogen assimilation
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -90
Score: 4.9 Sequence: TTGTCAGACTACCTAACAA
Locus tag: LSEI_2863
Name: ansB Funciton: Aspartate ammonia-lyase (EC 4.3.1.1) |
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ansB
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Aspartate ammonia-lyase (EC 4.3.1.1)
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Position: -172
Score: 5.3 Sequence: ATGTCAATTAATCTAACAT
Locus tag: LSEI_2849
Name: glnP Funciton: Glutamine ABC transporter, permease and substrate-binding protein
Locus tag: LSEI_2848
Name: glnQ Funciton: Glutamine ABC transporter, ATP-binding protein |
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glnP
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Glutamine ABC transporter, permease and substrate-binding protein
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glnQ
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Glutamine ABC transporter, ATP-binding protein
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Position: -173
Score: 4.7 Sequence: ATGTCACATAAGCTAACGC
Locus tag: LSEI_0653
Name: nrgA Funciton: Ammonium transporter |
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nrgA
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Ammonium transporter
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Position: -79
Score: 6 Sequence: ATGTCAGAAAAGCTTACAT
Locus tag: LSEI_1653
Name: glnR Funciton: Nitrogen metabolism transcriptional regulator, MerR family
Locus tag: LSEI_1652
Name: glnA Funciton: Glutamine synthetase type I (EC 6.3.1.2) |
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glnR
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Nitrogen metabolism transcriptional regulator, MerR family
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glnA
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Glutamine synthetase type I (EC 6.3.1.2)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |