Regulon of LexA in Lactobacillus rhamnosus GG
| Regulator type: | Transcription factor |
| TF locus tag: | LGG_00717 |
| Regulator family: | LexA |
| Regulation mode: | repressor |
| Biological process: | SOS response |
| Effector: | DNA damage |
| Regulog: | LexA - Lactobacillaceae |
| Statistics of regulated genes: | |
| - Genes | 14 |
| - Operons | 9 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Lactobacillaceae
- By trascription factor - LexA
- By TF family - LexA
- By effector - DNA damage
- By pathway - SOS response
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -29
Score: 4.9 Sequence: GCGAACATTTGTTTTA
Locus tag: LGG_01358
Name: uvrC Funciton: Nuclease subunit of the excinuclease complex |
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uvrC
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Nuclease subunit of the excinuclease complex
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Position: -179
Score: 4.5 Sequence: ACGAACACACATTCGA
Locus tag: LGG_01419
Name: parE Funciton: Topoisomerase IV subunit B (EC 5.99.1.-)
Locus tag: LGG_01420
Name: parC Funciton: Topoisomerase IV subunit A (EC 5.99.1.-) |
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parE
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Topoisomerase IV subunit B (EC 5.99.1.-)
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parC
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Topoisomerase IV subunit A (EC 5.99.1.-)
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Position: -53
Score: 4.5 Sequence: TTGAACACATGTTCGT
Position: -26
Score: 4.9 Sequence: ACAAACAAACGTTCGG
Locus tag: LGG_01676
Name: LJ1544 Funciton: hypothetical protein |
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LJ1544
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hypothetical protein
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Position: -60
Score: 4.7 Sequence: GCAAACGTCCGTTCGT
Locus tag: LGG_00717
Name: lexA Funciton: SOS-response regulator and protease LexA, LexA family (EC 3.4.21.88) |
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lexA
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SOS-response regulator and protease LexA, LexA family (EC 3.4.21.88)
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Position: -27
Score: 5.1 Sequence: GAAAACATATGTTCGA
Locus tag: LGG_01425
Name: xerC Funciton: Site-specific DNA-tyrosine recombinase, XerC |
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xerC
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Site-specific DNA-tyrosine recombinase, XerC
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Position: -40
Score: 5.2 Sequence: GCAAACATACGTTCGT
Locus tag: LGG_01010
Name: umuC Funciton: UV-damage repair protein
Locus tag: LGG_01009
Name: LVIS_2094 Funciton: Conserved hypothetical protein |
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umuC
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UV-damage repair protein
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LVIS_2094
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Conserved hypothetical protein
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Position: -69
Score: 4.4 Sequence: ACAAACGCGTGTTCGA
Locus tag: LGG_02643
Name: recA Funciton: DNA recombinase A |
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recA
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DNA recombinase A
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Position: -55
Score: 4.3 Sequence: CAGAATGTATGTTCTA
Locus tag: LGG_00328
Name: srmB Funciton: DinG family ATP-dependent helicase
Locus tag: LGG_00327
Name: lp_0307 Funciton: Conserved hypothetical protein
Locus tag: LGG_00326
Name: lp_0306 Funciton: Conserved hypothetical protein |
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srmB
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DinG family ATP-dependent helicase
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lp_0307
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Conserved hypothetical protein
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lp_0306
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Conserved hypothetical protein
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Position: -271
Score: 5 Sequence: GCGAAAGTATGTTCGC
Locus tag: LGG_00923
Name: uvrB Funciton: Excinuclease ABC, subunit B
Locus tag: LGG_00924
Name: uvrA Funciton: Excinuclease ABC, subunit A |
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uvrB
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Excinuclease ABC, subunit B
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uvrA
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Excinuclease ABC, subunit A
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |