Regulon of HrcA in Lactobacillus acidophilus NCFM
| Regulator type: | Transcription factor |
| TF locus tag: | LBA1249 |
| Regulator family: | HrcA |
| Regulation mode: | repressor |
| Biological process: | Heat shock response |
| Effector: | Heat shock |
| Regulog: | HrcA - Lactobacillaceae |
| Statistics of regulated genes: | |
| - Genes | 10 |
| - Operons | 6 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Lactobacillaceae
- By trascription factor - HrcA
- By TF family - HrcA
- By effector - Heat shock
- By pathway - Heat shock response
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -70
Score: 6.8 Sequence: TTAGCACTTGACTACCAAGAGTGCTAA
Locus tag: LBA0638
Name: clpL Funciton: ATP-dependent Clp protease, ATP-binding subunit |
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clpL
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ATP-dependent Clp protease, ATP-binding subunit
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Position: -93
Score: 6.1 Sequence: TTAGCACTCAGGTTGCATTATTGCTAA
Position: -45
Score: 6.1 Sequence: TTAGCACCTGATAGATGTGAGTGCTAA
Locus tag: LBA1249
Name: hrcA Funciton: Heat shock response transcriptional regulator HrcA, HrcA family
Locus tag: LBA1248
Name: grpE Funciton: Heat shock protein GrpE
Locus tag: LBA1247
Name: dnaK Funciton: Chaperone protein DnaK
Locus tag: LBA1246
Name: dnaJ Funciton: Chaperone protein DnaJ |
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hrcA
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Heat shock response transcriptional regulator HrcA, HrcA family
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grpE
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Heat shock protein GrpE
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dnaK
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Chaperone protein DnaK
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dnaJ
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Chaperone protein DnaJ
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Position: -57
Score: 6.9 Sequence: TTAGCACTCAACGCACTAGAGTGCTAA
Locus tag: LBA1910
Name: clpC Funciton: ATP-dependent Clp protease ATP-binding subunit ClpA |
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clpC
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ATP-dependent Clp protease ATP-binding subunit ClpA
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Position: -126
Score: 7.1 Sequence: TTAGCACTAAATATTAAAGAGTGCTAA
Locus tag: LBA0205
Name: hsp Funciton: Small heat shock protein |
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hsp
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Small heat shock protein
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Position: -59
Score: 6.1 Sequence: TTAGCACAGTACTTGTATGAGTGCTAA
Locus tag: LBA0694
Name: clpP Funciton: ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) |
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clpP
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ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92)
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Position: -159
Score: 7.6 Sequence: TTAGCACTTTTTTATAAAGAGTGCTAA
Position: -84
Score: 6.8 Sequence: TTAGCACTTAACTAAAAGGAGTGCTAA
Locus tag: LBA0405
Name: groS Funciton: Heat shock protein 60 family co-chaperone GroES
Locus tag: LBA0406
Name: groL Funciton: Heat shock protein 60 family chaperone GroEL |
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groS
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Heat shock protein 60 family co-chaperone GroES
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groL
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Heat shock protein 60 family chaperone GroEL
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |