Regulon of HrcA in Lactobacillus acidophilus NCFM

Properties
Regulator type:	Transcription factor
TF locus tag:	LBA1249
Regulator family:	HrcA
Regulation mode:	repressor
Biological process:	Heat shock response
Effector:	Heat shock
Regulog:	HrcA - Lactobacillaceae
Statistics of regulated genes:
- Genes	10
- Operons	6
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 69 sites [see more]

Member of regulog collections

By taxonomy - Lactobacillaceae
By trascription factor - HrcA
By TF family - HrcA
By effector - Heat shock
By pathway - Heat shock response

Regulated operons
	Locus Tag	Name	Function
Position: -70 Score: 6.8 Sequence: TTAGCACTTGACTACCAAGAGTGCTAA Locus tag: LBA0638 Name: clpL Funciton: ATP-dependent Clp protease, ATP-binding subunit
	LBA0638	clpL	ATP-dependent Clp protease, ATP-binding subunit
Position: -93 Score: 6.1 Sequence: TTAGCACTCAGGTTGCATTATTGCTAA Position: -45 Score: 6.1 Sequence: TTAGCACCTGATAGATGTGAGTGCTAA Locus tag: LBA1249 Name: hrcA Funciton: Heat shock response transcriptional regulator HrcA, HrcA family Locus tag: LBA1248 Name: grpE Funciton: Heat shock protein GrpE Locus tag: LBA1247 Name: dnaK Funciton: Chaperone protein DnaK Locus tag: LBA1246 Name: dnaJ Funciton: Chaperone protein DnaJ
	LBA1249	hrcA	Heat shock response transcriptional regulator HrcA, HrcA family
	LBA1248	grpE	Heat shock protein GrpE
	LBA1247	dnaK	Chaperone protein DnaK
	LBA1246	dnaJ	Chaperone protein DnaJ
Position: -57 Score: 6.9 Sequence: TTAGCACTCAACGCACTAGAGTGCTAA Locus tag: LBA1910 Name: clpC Funciton: ATP-dependent Clp protease ATP-binding subunit ClpA
	LBA1910	clpC	ATP-dependent Clp protease ATP-binding subunit ClpA
Position: -126 Score: 7.1 Sequence: TTAGCACTAAATATTAAAGAGTGCTAA Locus tag: LBA0205 Name: hsp Funciton: Small heat shock protein
	LBA0205	hsp	Small heat shock protein
Position: -59 Score: 6.1 Sequence: TTAGCACAGTACTTGTATGAGTGCTAA Locus tag: LBA0694 Name: clpP Funciton: ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92)
	LBA0694	clpP	ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92)
Position: -159 Score: 7.6 Sequence: TTAGCACTTTTTTATAAAGAGTGCTAA Position: -84 Score: 6.8 Sequence: TTAGCACTTAACTAAAAGGAGTGCTAA Locus tag: LBA0405 Name: groS Funciton: Heat shock protein 60 family co-chaperone GroES Locus tag: LBA0406 Name: groL Funciton: Heat shock protein 60 family chaperone GroEL
	LBA0405	groS	Heat shock protein 60 family co-chaperone GroES
	LBA0406	groL	Heat shock protein 60 family chaperone GroEL

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD