Regulon of NihR in Lactobacillus fermentum IFO 3956

Properties
Regulator type:	Transcription factor
TF locus tag:	LAF_1734
Regulator family:	CRP
Regulation mode:	activator
Biological process:	Nickel homeostasis
Effector:
Regulog:	NihR - Lactobacillaceae
Statistics of regulated genes:
- Genes	7
- Operons	2
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 10 sites [see more]

Member of regulog collections

By taxonomy - Lactobacillaceae
By TF family - CRP
By pathway - Nickel homeostasis

Regulated operons
	Locus Tag	Name	Function
Position: -127 Score: 4.4 Sequence: TTTTCCTTATGTAACA Locus tag: LAF_1733 Name: PF09861 Funciton: Conserved hypothetical protein, PF09861 family Locus tag: LAF_1732 Name: PF00731 Funciton: Predicted enzyme, PF00731 family Locus tag: LAF_1731 Name: PF01969 Funciton: Conserved hypothetical protein, PF01969 family Locus tag: LAF_1730 Name: LSA0788 Funciton: Predicted glycerol uptake facilitator protein Locus tag: LAF_1729 Name: LSA0790 Funciton: ATP-utilizing enzyme of the PP-loop superfamily Locus tag: LAF_1728 Name: nixA Funciton: High-affinity nickel permease
	LAF_1733	PF09861	Conserved hypothetical protein, PF09861 family
	LAF_1732	PF00731	Predicted enzyme, PF00731 family
	LAF_1731	PF01969	Conserved hypothetical protein, PF01969 family
	LAF_1730	LSA0788	Predicted glycerol uptake facilitator protein
	LAF_1729	LSA0790	ATP-utilizing enzyme of the PP-loop superfamily
	LAF_1728	nixA	High-affinity nickel permease
Position: -129 Score: 4.4 Sequence: TGTTACATAAGGAAAA Locus tag: LAF_1734 Name: nihR Funciton: Predicted transcriptional regulator for nickel homeostasis, Crp family
	LAF_1734	nihR	Predicted transcriptional regulator for nickel homeostasis, Crp family

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD