Regulog MalR - Lactobacillaceae
| Regulator type: | Transcription factor |
| Regulator family: | LacI |
| Regulation mode: | repressor |
| Biological process: | Maltose utilization; Maltodextrin utilization |
| Effector: | Maltose |
| Phylum: | Firmicutes |
| Visualization: | |
|
Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Lactobacillaceae
- By TF family - LacI
- By effector - Maltose
- By pathway - Maltose utilization
- By pathway - Maltodextrin utilization
| Genome | Genes | Operons |
|---|---|---|
| Lactobacillus acidophilus NCFM | ||
| Lactobacillus brevis ATCC 367 | 2 | 1 |
| Lactobacillus casei ATCC 334 | ||
| Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 | ||
| Lactobacillus fermentum IFO 3956 | 3 | 1 |
| Lactobacillus helveticus DPC 4571 | ||
| Lactobacillus johnsonii NCC 533 | ||
| Lactobacillus plantarum WCFS1 | 10 | 3 |
| Lactobacillus reuteri JCM 1112 | 3 | 1 |
| Lactobacillus rhamnosus GG | ||
| Lactobacillus sakei subsp. sakei 23K | ||
| Lactobacillus salivarius subsp. salivarius UCC118 | 4 | 1 |
| Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 | 7 | 2 |
| Oenococcus oeni PSU-1 | ||
| Pediococcus pentosaceus ATCC 25745 | 3 | 1 |
| Genes | Function | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | ||||||||||||||||
| malT |
|
*
Lactobacillus brevis ATCC 367 Site: position = -93 score = 6.22689 sequence = TTGCGCAATCGGTTGCATTA Gene: LVIS_0357: Predicted maltose/maltodextrin permease |
|
|
*
Lactobacillus fermentum IFO 3956 Site: position = -122 score = 6.57432 sequence = TTGTGCAAACGGTTGCACAA Gene: LAF_0024: Predicted maltose/maltodextrin permease |
|
|
*
Lactobacillus plantarum WCFS1 Site: position = -87 score = 6.2622 sequence = TCACGCAAACGCTTGCATAA Gene: lp_1729: Predicted maltose/maltodextrin permease |
*
Lactobacillus reuteri JCM 1112 Site: position = -124 score = 6.04445 sequence = TTGCGCAAGCGGTTGCGCAA Gene: LAR_0051: Predicted maltose/maltodextrin permease |
|
|
*
Lactobacillus salivarius subsp. salivarius UCC118 Site: position = -117 score = 6.2622 sequence = TATCGCAAACGGTTGCAAAA Gene: LSL_1282: Predicted maltose/maltodextrin permease |
*2
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 Site: position = -43 score = 5.49435 sequence = CAATGTAAACGGTTACAAAA Gene: LEUM_0893: Predicted maltose/maltodextrin permease Site: position = -186 score = 6.10746 sequence = TTGTGCAAACGCTTCCATTA Gene: LEUM_0994: Predicted maltose/maltodextrin permease |
|
*
Pediococcus pentosaceus ATCC 25745 Site: position = -86 score = 6.13413 sequence = AAGTGCAAACGCTTGCACAA Gene: PEPE_0968: Predicted maltose/maltodextrin permease |
Predicted maltose/maltodextrin permease |
| galM |
|
|
|
|
|
|
|
Gene: lp_1731: Aldose 1-epimerase |
|
|
|
Gene: LSL_1281: Aldose 1-epimerase |
Gene: LEUM_0996: Aldose 1-epimerase |
|
|
Aldose 1-epimerase |
| mapA |
Gene: LBA1870: Maltose phosphorylase (EC 2.4.1.8) / Trehalose phosphorylase (EC 2.4.1.64) |
Gene: LVIS_0358: Maltose phosphorylase (EC 2.4.1.8) / Trehalose phosphorylase (EC 2.4.1.64) |
Gene: LSEI_0982: Maltose phosphorylase (EC 2.4.1.8) / Trehalose phosphorylase (EC 2.4.1.64) |
|
Gene: LAF_0025: Maltose phosphorylase (EC 2.4.1.8) / Trehalose phosphorylase (EC 2.4.1.64) |
Gene: lhv_2000: Maltose phosphorylase (EC 2.4.1.8) / Trehalose phosphorylase (EC 2.4.1.64) |
Gene: LJ0213: Maltose phosphorylase (EC 2.4.1.8) / Trehalose phosphorylase (EC 2.4.1.64) |
Gene: lp_1730: Maltose phosphorylase (EC 2.4.1.8) / Trehalose phosphorylase (EC 2.4.1.64) |
Gene: LAR_0052: Maltose phosphorylase (EC 2.4.1.8) / Trehalose phosphorylase (EC 2.4.1.64) |
Gene: LGG_00945: Maltose phosphorylase (EC 2.4.1.8) / Trehalose phosphorylase (EC 2.4.1.64) |
|
Gene: LSL_1280: Maltose phosphorylase (EC 2.4.1.8) / Trehalose phosphorylase (EC 2.4.1.64) |
2
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 Gene: LEUM_0894: Maltose phosphorylase (EC 2.4.1.8) / Trehalose phosphorylase (EC 2.4.1.64) Gene: LEUM_0995: Maltose phosphorylase (EC 2.4.1.8) / Trehalose phosphorylase (EC 2.4.1.64) |
|
Gene: PEPE_0967: Maltose phosphorylase (EC 2.4.1.8) / Trehalose phosphorylase (EC 2.4.1.64) |
Maltose phosphorylase (EC 2.4.1.8) / Trehalose phosphorylase (EC 2.4.1.64) |
| pgmB |
Gene: LBA1869: Beta-phosphoglucomutase (EC 5.4.2.6) |
Gene: LVIS_1925: Beta-phosphoglucomutase (EC 5.4.2.6) |
Gene: LSEI_0983: Beta-phosphoglucomutase (EC 5.4.2.6) |
|
Gene: LAF_0026: Beta-phosphoglucomutase (EC 5.4.2.6) |
Gene: lhv_1999: Beta-phosphoglucomutase (EC 5.4.2.6) |
Gene: LJ0214: Beta-phosphoglucomutase (EC 5.4.2.6) |
|
Gene: LAR_0053: Beta-phosphoglucomutase (EC 5.4.2.6) |
Gene: LGG_00946: Beta-phosphoglucomutase (EC 5.4.2.6) |
|
Gene: LSL_1279: Beta-phosphoglucomutase (EC 5.4.2.6) |
2
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 Gene: LEUM_0895: Beta-phosphoglucomutase (EC 5.4.2.6) Gene: LEUM_0997: Beta-phosphoglucomutase (EC 5.4.2.6) |
|
Gene: PEPE_0966: Beta-phosphoglucomutase (EC 5.4.2.6) |
Beta-phosphoglucomutase (EC 5.4.2.6) |
| CRON 2. | ||||||||||||||||
| malX |
|
|
|
|
|
|
|
*
Lactobacillus plantarum WCFS1 Site: position = -86 score = 6.03066 sequence = TTACGAAAACGCTTGCGAAA Site: position = -74 score = 4.9198 sequence = TTGCGAAAGCGTTTGCACAG Gene: lp_0175: Maltose/maltodextrin ABC transporter, substrate-binding protein |
|
|
|
|
|
|
|
Maltose/maltodextrin ABC transporter, substrate-binding protein |
| malC |
|
|
|
|
|
|
|
Gene: lp_0176: Maltose/maltodextrin ABC transporter, permease protein 1 |
|
|
|
|
|
|
|
Maltose/maltodextrin ABC transporter, permease protein 1 |
| malD |
|
|
|
|
|
|
|
Gene: lp_0177: Maltose/maltodextrin ABC transporter, permease protein 2 |
|
|
|
|
|
|
|
Maltose/maltodextrin ABC transporter, permease protein 2 |
| malA |
|
|
|
|
|
|
|
Gene: lp_0178: Maltodextrose utilization protein MalA |
|
|
|
|
|
|
|
Maltodextrose utilization protein MalA |
| CRON 3. | ||||||||||||||||
| malR |
|
Gene: LVIS_0356: Maltose utilization transcriptional regulator MalR, LacI family |
|
|
Gene: LAF_0023: Maltose utilization transcriptional regulator MalR, LacI family |
|
|
*
Lactobacillus plantarum WCFS1 Site: position = -77 score = 6.2364 sequence = TTATGCAATCGCTTGCAATA Gene: lp_0172: Maltose utilization transcriptional regulator MalR, LacI family |
Gene: LAR_0049: Maltose utilization transcriptional regulator MalR, LacI family |
|
|
Gene: LSL_1283: Maltose utilization transcriptional regulator MalR, LacI family |
Gene: LEUM_0891: Maltose utilization transcriptional regulator MalR, LacI family |
|
Gene: PEPE_0969: Maltose utilization transcriptional regulator MalR, LacI family |
Maltose utilization transcriptional regulator MalR, LacI family |
| mdxR |
Gene: LBA1874: Maltose/maltodextrin utilization transcriptional repressor MdxR, LacI family |
|
Gene: LSEI_0979: Maltose/maltodextrin utilization transcriptional repressor MdxR, LacI family |
|
|
|
Gene: LJ0210: Maltose/maltodextrin utilization transcriptional repressor MdxR, LacI family |
Gene: lp_0173: Maltose/maltodextrin utilization transcriptional repressor MdxR, LacI family |
|
|
|
|
Gene: LEUM_0892: Maltose/maltodextrin utilization transcriptional repressor MdxR, LacI family |
|
|
Maltose/maltodextrin utilization transcriptional repressor MdxR, LacI family |
| agl1 |
Gene: LBA1872: Oligo-1,6-glucosidase (EC 3.2.1.10) |
Gene: LVIS_0309: Oligo-1,6-glucosidase (EC 3.2.1.10) |
Gene: LSEI_0980: Oligo-1,6-glucosidase (EC 3.2.1.10) |
|
|
Gene: lhv_2002: Oligo-1,6-glucosidase (EC 3.2.1.10) |
Gene: LJ0211: Oligo-1,6-glucosidase (EC 3.2.1.10) |
Gene: lp_0174: Oligo-1,6-glucosidase (EC 3.2.1.10) |
|
|
|
|
|
|
|
Oligo-1,6-glucosidase (EC 3.2.1.10) |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
|
Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |