Regulon of TPP in Lactobacillus brevis ATCC 367

Properties
Regulator type:	RNA regulatory element
Name:	TPP
RFAM:	RF00059
Regulation mode:
Biological process:	Thiamine biosynthesis
Effector:	Thiamine pyrophosphate
Regulog:	TPP - Lactobacillaceae
Under regulation:
- Genes	7
- Operons	2

Member of regulog collections

By taxonomy - Lactobacillaceae
By RNA motif - TPP
By effector - Thiamine pyrophosphate
By pathway - Thiamine biosynthesis

Regulated operons
	Locus Tag	Name	Function
Position: -180 Score: 58.1 Sequence: ACATATGACTGGGGT... Locus tag: LVIS_1827 Name: ykoE Funciton: Substrate-specific component YkoE of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine Locus tag: LVIS_1828 Name: ykoD Funciton: Duplicated ATPase component YkoD of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine Locus tag: LVIS_1829 Name: ykoC Funciton: Transmembrane component YkoC of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine Locus tag: LVIS_1830 Name: tenA Funciton: Thiaminase II (EC 3.5.99.2)
	LVIS_1827	ykoE	Substrate-specific component YkoE of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
	LVIS_1828	ykoD	Duplicated ATPase component YkoD of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
	LVIS_1829	ykoC	Transmembrane component YkoC of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
	LVIS_1830	tenA	Thiaminase II (EC 3.5.99.2)
Position: -334 Score: 64.3 Sequence: ACCAAAACACTAGGG... Locus tag: LVIS_2099 Name: thiM Funciton: Hydroxyethylthiazole kinase (EC 2.7.1.50) Locus tag: LVIS_2098 Name: thiD Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7) Locus tag: LVIS_2097 Name: thiE Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
	LVIS_2099	thiM	Hydroxyethylthiazole kinase (EC 2.7.1.50)
	LVIS_2098	thiD	Phosphomethylpyrimidine kinase (EC 2.7.4.7)
	LVIS_2097	thiE	Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD