Collection of regulogs involved in Thiamine biosynthesis
Type | Phylum | Regulog | Regulons (studied genomes) | Regulatory sites |
---|---|---|---|---|
TF | Crenarchaeota | ThiR - Sulfolobales | 5 (5) | 13 |
TF | Crenarchaeota | ThiR - Thermoproteales | 5 (5) | 22 |
TF | Euryarchaeota | ThiR - Halobacteriales | 11 (11) | 40 |
TF | Euryarchaeota | ThiR - Thermococcales | 7 (7) | 35 |
RNA | Actinobacteria | TPP - Bifidobacteriaceae | 9 (9) | 34 |
RNA | Actinobacteria | TPP - Corynebacteriaceae | 8 (8) | 23 |
RNA | Actinobacteria | TPP - Mycobacteriaceae | 9 (9) | 22 |
RNA | Actinobacteria | TPP - Streptomycetaceae | 4 (4) | 13 |
RNA | Bacteroidetes | TPP - Bacteroidaceae | 11 (11) | 19 |
RNA | Chlorobiales | TPP - Chlorobiales | 9 (11) | 11 |
RNA | Chloroflexi | TPP - Chloroflexia | 5 (5) | 14 |
RNA | Cyanobacteria | TPP - Cyanobacteria | 14 (14) | 14 |
RNA | Deinococcus-Thermus | TPP - Deinococcus-Thermus | 5 (5) | 10 |
RNA | Firmicutes | TPP - Bacillales | 11 (11) | 47 |
RNA | Firmicutes | TPP - Clostridia-3 | 14 (14) | 34 |
RNA | Firmicutes | TPP - Clostridiaceae | 20 (20) | 62 |
RNA | Firmicutes | TPP - Lactobacillaceae | 14 (15) | 36 |
RNA | Firmicutes | TPP - Staphylococcaceae | 7 (7) | 30 |
RNA | Firmicutes | TPP - Streptococcaceae | 15 (15) | 23 |
RNA | Firmicutes | TPP - Thermoanaerobacterales | 7 (7) | 17 |
RNA | Proteobacteria | TPP - Burkholderia | 8 (8) | 18 |
RNA | Proteobacteria | TPP - Caulobacterales | 4 (4) | 4 |
RNA | Proteobacteria | TPP - Enterobacteriales | 12 (12) | 38 |
RNA | Proteobacteria | TPP - Pasteurellales | 9 (9) | 20 |
RNA | Proteobacteria | TPP - Pseudomonadaceae | 8 (8) | 9 |
RNA | Proteobacteria | TPP - Ralstonia | 6 (6) | 6 |
RNA | Proteobacteria | TPP - Rhizobiales | 14 (15) | 30 |
RNA | Proteobacteria | TPP - Rhodobacterales | 15 (15) | 30 |
RNA | Proteobacteria | TPP - Shewanellaceae | 16 (16) | 31 |
RNA | Proteobacteria | TPP - Vibrionales | 10 (10) | 30 |
RNA | Proteobacteria/Alpha | TPP - Rhodospirillales | 9 (9) | 15 |
RNA | Proteobacteria/Alpha | TPP - Sphingomonadales | 7 (7) | 7 |
RNA | Proteobacteria/Beta | TPP - Comamonadaceae | 11 (11) | 25 |
RNA | Proteobacteria/Beta | TPP - Various betaproteobacteria | 12 (12) | 16 |
RNA | Proteobacteria/Delta | TPP - Desulfovibrionales | 8 (10) | 17 |
RNA | Proteobacteria/Delta | TPP - Desulfuromonadales | 8 (9) | 15 |
RNA | Proteobacteria/Epsilon | TPP - Helicobacteraceae | 3 (8) | 3 |
RNA | Proteobacteria/Gamma | TPP - Francisellaceae | 3 (3) | 4 |
RNA | Proteobacteria/Gamma | TPP - Moraxellaceae | 4 (4) | 5 |
RNA | Proteobacteria/Gamma | TPP - Oceanospirillales/Alteromonadales | 11 (12) | 23 |
RNA | Proteobacteria/Gamma | TPP - Psychromonadaceae/Aeromonadales | 6 (6) | 14 |
RNA | Proteobacteria/Gamma | TPP - Xanthomonadales | 4 (4) | 5 |
RNA | Thermotogae | TPP - Thermotogales | 11 (11) | 16 |