Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulog TPP - Bacillales

Properties
Regulator type: RNA regulatory element
Name: TPP
RFAM: RF00059
Regulation mode:
Biological process: Thiamine biosynthesis
Effector: Thiamine pyrophosphate
Phylum: Firmicutes
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Anoxybacillus flavithermus WK1 13 3
Bacillus amyloliquefaciens FZB42 18 6
Bacillus cereus ATCC 14579 19 6
Bacillus clausii KSM-K16 12 5
Bacillus halodurans C-125 8 4
Bacillus licheniformis DSM 13 13 4
Bacillus pumilus SAFR-032 13 4
Bacillus subtilis subsp. subtilis str. 168 14 5
Geobacillus kaustophilus HTA426 10 2
Oceanobacillus iheyensis HTE831 13 4
Paenibacillus sp. JDR-2 10 3
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
thiT
 
Anoxybacillus flavithermus WK1
*
Bacillus amyloliquefaciens FZB42

Site:
position = -200
score = 62.57
sequence = ATGACCACAAGGGGA...

Gene: RBAM_028100: Substrate-specific component ThiT of thiamin ECF transporter
*
Bacillus cereus ATCC 14579

Site:
position = -187
score = 56.17
sequence = GTTATCACTGGGGGA...

Gene: BC4808: Substrate-specific component ThiT of thiamin ECF transporter
 
Bacillus clausii KSM-K16
*
Bacillus halodurans C-125

Site:
position = -163
score = 76.98
sequence = ATAACCACTAGGGGT...

Gene: BH0830: Substrate-specific component ThiT of thiamin ECF transporter
*
Bacillus licheniformis DSM 13

Site:
position = -210
score = 63.16
sequence = ATGACCACAAGGGGA...

Gene: BLi03258: Substrate-specific component ThiT of thiamin ECF transporter
*
Bacillus pumilus SAFR-032

Site:
position = -199
score = 59.27
sequence = ATAACCGCAGGGGGA...

Gene: BPUM_2725: Substrate-specific component ThiT of thiamin ECF transporter
*
Bacillus subtilis subsp. subtilis str. 168

Site:
position = -200
score = 61.07
sequence = ATGACCACAAGGGGA...

Gene: BSU30990: Substrate-specific component ThiT of thiamin ECF transporter
 
Geobacillus kaustophilus HTA426
*
Oceanobacillus iheyensis HTE831

Site:
position = -211
score = 59.87
sequence = AAGCCTGCAAGGGGA...

Gene: OB1371: Substrate-specific component ThiT of thiamin ECF transporter
 
Paenibacillus sp. JDR-2
Substrate-specific component ThiT of thiamin ECF transporter
 
CRON 2.
thiC
*
Anoxybacillus flavithermus WK1

Site:
position = -213
score = 82.91
sequence = TCATCTACTAGGGGA...

Gene: Aflv_1650: Thiamin biosynthesis protein ThiC
*
Bacillus amyloliquefaciens FZB42

Site:
position = -231
score = 82.27
sequence = ATAGTTACTGGGGGT...

Gene: RBAM_009060: Thiamin biosynthesis protein ThiC
*
Bacillus cereus ATCC 14579

Site:
position = -229
score = 78.76
sequence = AGTGATAAACTAGGG...

Gene: BC5227: Thiamin biosynthesis protein ThiC
 
Bacillus clausii KSM-K16
*
Bacillus halodurans C-125

Site:
position = -253
score = 76.42
sequence = GAAATAACTAGGGGA...

Gene: BH1933: Thiamin biosynthesis protein ThiC
*
Bacillus licheniformis DSM 13

Site:
position = -255
score = 81.95
sequence = AGCATTACTAGGGGT...

Gene: BLi00940: Thiamin biosynthesis protein ThiC
*
Bacillus pumilus SAFR-032

Site:
position = -238
score = 80.06
sequence = TAAATGTGACTAGGG...

Gene: BPUM_2421: Thiamin biosynthesis protein ThiC
*
Bacillus subtilis subsp. subtilis str. 168

Site:
position = -239
score = 81.9
sequence = ATAGTTACTGGGGGT...

Gene: BSU08790: Thiamin biosynthesis protein ThiC
*
Geobacillus kaustophilus HTA426

Site:
position = -284
score = 85.83
sequence = TTATCTGCTAGGGGA...

Gene: GK0370: Thiamin biosynthesis protein ThiC
 
Oceanobacillus iheyensis HTE831
*
Paenibacillus sp. JDR-2

Site:
position = -407
score = 81.34
sequence = GGAATTCCACTAGGG...

Gene: Pjdr2_0731: Thiamin biosynthesis protein ThiC
Thiamin biosynthesis protein ThiC
 
CRON 3.
thiY2
 
Anoxybacillus flavithermus WK1
 
Bacillus amyloliquefaciens FZB42
 
Bacillus cereus ATCC 14579

Gene: BC0426: Thiamin ABC transporter, substrate-binding component
 
Bacillus clausii KSM-K16
 
Bacillus halodurans C-125
 
Bacillus licheniformis DSM 13
 
Bacillus pumilus SAFR-032
 
Bacillus subtilis subsp. subtilis str. 168
 
Geobacillus kaustophilus HTA426
 
Oceanobacillus iheyensis HTE831
*
Paenibacillus sp. JDR-2

Site:
position = -263
score = 60.75
sequence = GTGAATAGCACCGGG...

Gene: Pjdr2_3510: Thiamin ABC transporter, substrate-binding component
Thiamin ABC transporter, substrate-binding component
COG0011
 
Anoxybacillus flavithermus WK1
 
Bacillus amyloliquefaciens FZB42
*
Bacillus cereus ATCC 14579

Site:
position = -202
score = 60.64
sequence = ATTAAGGACCGGGGA...

Gene: BC0424: Cytoplasmic thiamin-binding component of thiamin ABC transporter, COG0011 family
 
Bacillus clausii KSM-K16

Gene: ABC0588: Cytoplasmic thiamin-binding component of thiamin ABC transporter, COG0011 family
 
Bacillus halodurans C-125

Gene: BH3874: Cytoplasmic thiamin-binding component of thiamin ABC transporter, COG0011 family
 
Bacillus licheniformis DSM 13
 
Bacillus pumilus SAFR-032
 
Bacillus subtilis subsp. subtilis str. 168
 
Geobacillus kaustophilus HTA426
 
Oceanobacillus iheyensis HTE831
 
Paenibacillus sp. JDR-2

Gene: Pjdr2_3509: Cytoplasmic thiamin-binding component of thiamin ABC transporter, COG0011 family
Cytoplasmic thiamin-binding component of thiamin ABC transporter, COG0011 family
thiX2
 
Anoxybacillus flavithermus WK1
 
Bacillus amyloliquefaciens FZB42
 
Bacillus cereus ATCC 14579

Gene: BC0425: Thiamin ABC transporter, transmembrane component
 
Bacillus clausii KSM-K16
 
Bacillus halodurans C-125
 
Bacillus licheniformis DSM 13
 
Bacillus pumilus SAFR-032
 
Bacillus subtilis subsp. subtilis str. 168
 
Geobacillus kaustophilus HTA426
 
Oceanobacillus iheyensis HTE831
 
Paenibacillus sp. JDR-2

Gene: Pjdr2_3508: Thiamin ABC transporter, transmembrane component
Thiamin ABC transporter, transmembrane component
thiZ2
 
Anoxybacillus flavithermus WK1
 
Bacillus amyloliquefaciens FZB42
 
Bacillus cereus ATCC 14579

Gene: BC0427: Thiamin ABC transporter, ATPase component
 
Bacillus clausii KSM-K16
 
Bacillus halodurans C-125
 
Bacillus licheniformis DSM 13
 
Bacillus pumilus SAFR-032
 
Bacillus subtilis subsp. subtilis str. 168
 
Geobacillus kaustophilus HTA426
 
Oceanobacillus iheyensis HTE831
 
Paenibacillus sp. JDR-2

Gene: Pjdr2_3507: Thiamin ABC transporter, ATPase component
Thiamin ABC transporter, ATPase component
COG0084
 
Anoxybacillus flavithermus WK1
 
Bacillus amyloliquefaciens FZB42
 
Bacillus cereus ATCC 14579

Gene: BC0234: TatD-related deoxyribonuclease, COG0084
 
Bacillus clausii KSM-K16
 
Bacillus halodurans C-125
 
Bacillus licheniformis DSM 13
 
Bacillus pumilus SAFR-032
 
Bacillus subtilis subsp. subtilis str. 168
 
Geobacillus kaustophilus HTA426

Gene: GK0184: TatD-related deoxyribonuclease, COG0084
 
Oceanobacillus iheyensis HTE831
 
Paenibacillus sp. JDR-2

Gene: Pjdr2_3506: TatD-related deoxyribonuclease, COG0084
TatD-related deoxyribonuclease, COG0084
 
CRON 4.
tenA
*
Anoxybacillus flavithermus WK1

Site:
position = -196
score = 90.59
sequence = TGTATTCCACTAGGG...

Gene: Aflv_2320: 4-amino-5-aminomethyl-2-methylpyrimidine hydrolase TenA
*
Bacillus amyloliquefaciens FZB42

Site:
position = -192
score = 80.35
sequence = ATGACCACTAGGGGT...

Gene: RBAM_011660: 4-amino-5-aminomethyl-2-methylpyrimidine hydrolase TenA
*2
Bacillus cereus ATCC 14579

Site:
position = -232
score = 82.27
sequence = TCATCCACTAGGGGG...

Gene: BC2551: 4-amino-5-aminomethyl-2-methylpyrimidine hydrolase TenA

Site:
position = -360
score = 66.39
sequence = TAGTTTGCTAGGAGA...

Site:
position = -188
score = 74.62
sequence = GAAACCACTAGGGGT...

Gene: BC0742: 4-amino-5-aminomethyl-2-methylpyrimidine hydrolase TenA
*2
Bacillus clausii KSM-K16

Gene: ABC0669: 4-amino-5-aminomethyl-2-methylpyrimidine hydrolase TenA

Site:
position = -174
score = 90.72
sequence = GAAGAACCACTAGGG...

Gene: ABC0756: 4-amino-5-aminomethyl-2-methylpyrimidine hydrolase TenA
 
Bacillus halodurans C-125

Gene: BH2679: 4-amino-5-aminomethyl-2-methylpyrimidine hydrolase TenA
*2
Bacillus licheniformis DSM 13

Site:
position = -191
score = 83.46
sequence = TTTTCCACTAGGGGA...

Gene: BLi01259: 4-amino-5-aminomethyl-2-methylpyrimidine hydrolase TenA

Site:
position = -217
score = 86.0
sequence = GGAAGTCCACTAGGG...

Gene: BLi04205: 4-amino-5-aminomethyl-2-methylpyrimidine hydrolase TenA
*2
Bacillus pumilus SAFR-032

Site:
position = -187
score = 84.32
sequence = TGATCCACTAGGGGA...

Gene: BPUM_1094: 4-amino-5-aminomethyl-2-methylpyrimidine hydrolase TenA

Site:
position = -192
score = 80.36
sequence = AAAAGTCCACTAGGG...

Gene: BPUM_3574: 4-amino-5-aminomethyl-2-methylpyrimidine hydrolase TenA
*
Bacillus subtilis subsp. subtilis str. 168

Site:
position = -186
score = 80.48
sequence = TTAACCACTAGGGGT...

Gene: BSU11650: 4-amino-5-aminomethyl-2-methylpyrimidine hydrolase TenA
*
Geobacillus kaustophilus HTA426

Site:
position = -213
score = 90.67
sequence = TCATCCACTAGGGGG...

Gene: GK0618: 4-amino-5-aminomethyl-2-methylpyrimidine hydrolase TenA
 2
Oceanobacillus iheyensis HTE831

Gene: OB0641: 4-amino-5-aminomethyl-2-methylpyrimidine hydrolase TenA

Gene: OB0475: 4-amino-5-aminomethyl-2-methylpyrimidine hydrolase TenA
*
Paenibacillus sp. JDR-2

Site:
position = -203
score = 54.17
sequence = GCATAATGCGTGCGG...

Gene: Pjdr2_5407: 4-amino-5-aminomethyl-2-methylpyrimidine hydrolase TenA
4-amino-5-aminomethyl-2-methylpyrimidine hydrolase TenA
ykoE
 
Anoxybacillus flavithermus WK1

Gene: Aflv_2319: Substrate-specific component YkoE of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
*
Bacillus amyloliquefaciens FZB42

Site:
position = -294
score = 80.77
sequence = GGAAACGCACTAGGG...

Gene: RBAM_013090: Substrate-specific component YkoE of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
 
Bacillus cereus ATCC 14579
*
Bacillus clausii KSM-K16

Site:
position = -200
score = 74.06
sequence = ACAACCACTAGGGGT...

Gene: ABC1933: Substrate-specific component YkoE of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
 
Bacillus halodurans C-125
 
Bacillus licheniformis DSM 13

Gene: BLi04204: Substrate-specific component YkoE of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
 
Bacillus pumilus SAFR-032

Gene: BPUM_3573: Substrate-specific component YkoE of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
 
Bacillus subtilis subsp. subtilis str. 168

Gene: BSU13230: Substrate-specific component YkoE of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
 
Geobacillus kaustophilus HTA426

Gene: GK0619: Substrate-specific component YkoE of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
 
Oceanobacillus iheyensis HTE831

Gene: OB0805: Substrate-specific component YkoE of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
 
Paenibacillus sp. JDR-2
Substrate-specific component YkoE of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
ykoD
 
Anoxybacillus flavithermus WK1

Gene: Aflv_2318: Duplicated ATPase component YkoD of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
 
Bacillus amyloliquefaciens FZB42

Gene: RBAM_013080: Duplicated ATPase component YkoD of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
 
Bacillus cereus ATCC 14579
 
Bacillus clausii KSM-K16

Gene: ABC1934: Duplicated ATPase component YkoD of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
 
Bacillus halodurans C-125
 
Bacillus licheniformis DSM 13

Gene: BLi04203: Duplicated ATPase component YkoD of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
 
Bacillus pumilus SAFR-032

Gene: BPUM_3572: Duplicated ATPase component YkoD of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
 
Bacillus subtilis subsp. subtilis str. 168

Gene: BSU13220: Duplicated ATPase component YkoD of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
 
Geobacillus kaustophilus HTA426

Gene: GK0620: Duplicated ATPase component YkoD of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
 
Oceanobacillus iheyensis HTE831

Gene: OB0804: Duplicated ATPase component YkoD of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
 
Paenibacillus sp. JDR-2
Duplicated ATPase component YkoD of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
ykoC
 
Anoxybacillus flavithermus WK1

Gene: Aflv_2317: Transmembrane component YkoC of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
 
Bacillus amyloliquefaciens FZB42

Gene: RBAM_013070: Transmembrane component YkoC of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
 
Bacillus cereus ATCC 14579
 
Bacillus clausii KSM-K16

Gene: ABC1935: Transmembrane component YkoC of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
 
Bacillus halodurans C-125
 
Bacillus licheniformis DSM 13

Gene: BLi04202: Transmembrane component YkoC of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
 
Bacillus pumilus SAFR-032

Gene: BPUM_3571: Transmembrane component YkoC of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
 
Bacillus subtilis subsp. subtilis str. 168

Gene: BSU13210: Transmembrane component YkoC of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
 
Geobacillus kaustophilus HTA426

Gene: GK0621: Transmembrane component YkoC of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
 
Oceanobacillus iheyensis HTE831

Gene: OB0803: Transmembrane component YkoC of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
 
Paenibacillus sp. JDR-2
Transmembrane component YkoC of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
tenI
 
Anoxybacillus flavithermus WK1

Gene: Aflv_2316: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
 
Bacillus amyloliquefaciens FZB42

Gene: RBAM_011670: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
 
Bacillus cereus ATCC 14579

Gene: BC0746: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
 
Bacillus clausii KSM-K16
 
Bacillus halodurans C-125
 
Bacillus licheniformis DSM 13

Gene: BLi01260: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
 
Bacillus pumilus SAFR-032

Gene: BPUM_1095: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
 
Bacillus subtilis subsp. subtilis str. 168

Gene: BSU11660: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
 
Geobacillus kaustophilus HTA426

Gene: GK0622: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
 
Oceanobacillus iheyensis HTE831
 
Paenibacillus sp. JDR-2
Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
thiO
 
Anoxybacillus flavithermus WK1

Gene: Aflv_2315: Glycine oxidase ThiO (EC 1.4.3.19)
 
Bacillus amyloliquefaciens FZB42

Gene: RBAM_011680: Glycine oxidase ThiO (EC 1.4.3.19)
 
Bacillus cereus ATCC 14579

Gene: BC0747: Glycine oxidase ThiO (EC 1.4.3.19)
 
Bacillus clausii KSM-K16

Gene: ABC1736: Glycine oxidase ThiO (EC 1.4.3.19)
 
Bacillus halodurans C-125

Gene: BH1434: Glycine oxidase ThiO (EC 1.4.3.19)
 
Bacillus licheniformis DSM 13

Gene: BLi01261: Glycine oxidase ThiO (EC 1.4.3.19)
 
Bacillus pumilus SAFR-032

Gene: BPUM_1096: Glycine oxidase ThiO (EC 1.4.3.19)
 
Bacillus subtilis subsp. subtilis str. 168

Gene: BSU11670: Glycine oxidase ThiO (EC 1.4.3.19)
 
Geobacillus kaustophilus HTA426

Gene: GK0623: Glycine oxidase ThiO (EC 1.4.3.19)
 
Oceanobacillus iheyensis HTE831
 
Paenibacillus sp. JDR-2

Gene: Pjdr2_5399: Glycine oxidase ThiO (EC 1.4.3.19)
Glycine oxidase ThiO (EC 1.4.3.19)
thiS
 
Anoxybacillus flavithermus WK1

Gene: Aflv_2314: Sulfur carrier protein ThiS
 
Bacillus amyloliquefaciens FZB42

Gene: RBAM_011690: Sulfur carrier protein ThiS
 
Bacillus cereus ATCC 14579

Gene: BC0748: Sulfur carrier protein ThiS
 
Bacillus clausii KSM-K16

Gene: ABC1734: Sulfur carrier protein ThiS
 
Bacillus halodurans C-125

Gene: BH1432: Sulfur carrier protein ThiS
 
Bacillus licheniformis DSM 13

Gene: BLi01262: Sulfur carrier protein ThiS
 
Bacillus pumilus SAFR-032

Gene: BPUM_1097: Sulfur carrier protein ThiS
 
Bacillus subtilis subsp. subtilis str. 168

Gene: BSU11680: Sulfur carrier protein ThiS
 
Geobacillus kaustophilus HTA426

Gene: GK0624: Sulfur carrier protein ThiS
 
Oceanobacillus iheyensis HTE831
 
Paenibacillus sp. JDR-2

Gene: Pjdr2_5401: Sulfur carrier protein ThiS
Sulfur carrier protein ThiS
thiG
 
Anoxybacillus flavithermus WK1

Gene: Aflv_2313: Thiazole synthase ThiG
 
Bacillus amyloliquefaciens FZB42

Gene: RBAM_011700: Thiazole synthase ThiG
 
Bacillus cereus ATCC 14579

Gene: BC0749: Thiazole synthase ThiG
 
Bacillus clausii KSM-K16

Gene: ABC1735: Thiazole synthase ThiG
 
Bacillus halodurans C-125

Gene: BH1433: Thiazole synthase ThiG
 
Bacillus licheniformis DSM 13

Gene: BLi01263: Thiazole synthase ThiG
 
Bacillus pumilus SAFR-032

Gene: BPUM_1098: Thiazole synthase ThiG
 
Bacillus subtilis subsp. subtilis str. 168

Gene: BSU11690: Thiazole synthase ThiG
 
Geobacillus kaustophilus HTA426

Gene: GK0625: Thiazole synthase ThiG
 
Oceanobacillus iheyensis HTE831
 
Paenibacillus sp. JDR-2

Gene: Pjdr2_5400: Thiazole synthase ThiG
Thiazole synthase ThiG
thiF
 
Anoxybacillus flavithermus WK1

Gene: Aflv_2312: Sulfur carrier protein adenylyltransferase ThiF
 
Bacillus amyloliquefaciens FZB42

Gene: RBAM_011710: Sulfur carrier protein adenylyltransferase ThiF
 
Bacillus cereus ATCC 14579

Gene: BC0750: Sulfur carrier protein adenylyltransferase ThiF
 
Bacillus clausii KSM-K16
 
Bacillus halodurans C-125
 
Bacillus licheniformis DSM 13

Gene: BLi01264: Sulfur carrier protein adenylyltransferase ThiF
 
Bacillus pumilus SAFR-032

Gene: BPUM_1099: Sulfur carrier protein adenylyltransferase ThiF
 
Bacillus subtilis subsp. subtilis str. 168

Gene: BSU11700: Sulfur carrier protein adenylyltransferase ThiF
 
Geobacillus kaustophilus HTA426

Gene: GK0626: Sulfur carrier protein adenylyltransferase ThiF
 
Oceanobacillus iheyensis HTE831
 
Paenibacillus sp. JDR-2
Sulfur carrier protein adenylyltransferase ThiF
thiD
 
Anoxybacillus flavithermus WK1

Gene: Aflv_2311: Phosphomethylpyrimidine kinase (EC 2.7.4.7)
 2
Bacillus amyloliquefaciens FZB42

Gene: RBAM_005710: Phosphomethylpyrimidine kinase (EC 2.7.4.7)

Gene: RBAM_011720: Phosphomethylpyrimidine kinase (EC 2.7.4.7)
 
Bacillus cereus ATCC 14579

Gene: BC0751: Phosphomethylpyrimidine kinase (EC 2.7.4.7)
*2
Bacillus clausii KSM-K16

Gene: ABC1737: Phosphomethylpyrimidine kinase (EC 2.7.4.7)

Site:
position = -185
score = 73.53
sequence = TAGATTCCACTAGGG...

Gene: ABC1627: Phosphomethylpyrimidine kinase (EC 2.7.4.7)
 
Bacillus halodurans C-125

Gene: BH1435: Phosphomethylpyrimidine kinase (EC 2.7.4.7)
 
Bacillus licheniformis DSM 13

Gene: BLi01265: Phosphomethylpyrimidine kinase (EC 2.7.4.7)
 
Bacillus pumilus SAFR-032

Gene: BPUM_1100: Phosphomethylpyrimidine kinase (EC 2.7.4.7)
 
Bacillus subtilis subsp. subtilis str. 168

Gene: BSU11710: Phosphomethylpyrimidine kinase (EC 2.7.4.7)
 
Geobacillus kaustophilus HTA426

Gene: GK1510: Phosphomethylpyrimidine kinase (EC 2.7.4.7)
 
Oceanobacillus iheyensis HTE831

Gene: OB0474: Phosphomethylpyrimidine kinase (EC 2.7.4.7)
 
Paenibacillus sp. JDR-2

Gene: Pjdr2_5398: Phosphomethylpyrimidine kinase (EC 2.7.4.7)
Phosphomethylpyrimidine kinase (EC 2.7.4.7)
thiZ
 
Anoxybacillus flavithermus WK1
 
Bacillus amyloliquefaciens FZB42
 
Bacillus cereus ATCC 14579

Gene: BC0743: Hydroxymethylpyrimidine ABC transporter, ATPase component
 
Bacillus clausii KSM-K16
 
Bacillus halodurans C-125

Gene: BH2680: Hydroxymethylpyrimidine ABC transporter, ATPase component
 
Bacillus licheniformis DSM 13
 
Bacillus pumilus SAFR-032
 
Bacillus subtilis subsp. subtilis str. 168
 
Geobacillus kaustophilus HTA426
 
Oceanobacillus iheyensis HTE831
 
Paenibacillus sp. JDR-2

Gene: Pjdr2_5406: Hydroxymethylpyrimidine ABC transporter, ATPase component
Hydroxymethylpyrimidine ABC transporter, ATPase component
thiX
 
Anoxybacillus flavithermus WK1
 
Bacillus amyloliquefaciens FZB42
 
Bacillus cereus ATCC 14579

Gene: BC0744: Hydroxymethylpyrimidine ABC transporter, transmembrane component
 
Bacillus clausii KSM-K16
 
Bacillus halodurans C-125

Gene: BH2681: Hydroxymethylpyrimidine ABC transporter, transmembrane component
 
Bacillus licheniformis DSM 13
 
Bacillus pumilus SAFR-032
 
Bacillus subtilis subsp. subtilis str. 168
 
Geobacillus kaustophilus HTA426
 
Oceanobacillus iheyensis HTE831
 
Paenibacillus sp. JDR-2

Gene: Pjdr2_5405: Hydroxymethylpyrimidine ABC transporter, transmembrane component
Hydroxymethylpyrimidine ABC transporter, transmembrane component
thiY
 
Anoxybacillus flavithermus WK1
 
Bacillus amyloliquefaciens FZB42
 
Bacillus cereus ATCC 14579

Gene: BC0745: Hydroxymethylpyrimidine ABC transporter, substrate-binding component
 
Bacillus clausii KSM-K16
 
Bacillus halodurans C-125

Gene: BH2682: Hydroxymethylpyrimidine ABC transporter, substrate-binding component
 
Bacillus licheniformis DSM 13
 
Bacillus pumilus SAFR-032
 
Bacillus subtilis subsp. subtilis str. 168
 
Geobacillus kaustophilus HTA426
 
Oceanobacillus iheyensis HTE831
 
Paenibacillus sp. JDR-2

Gene: Pjdr2_5404: Hydroxymethylpyrimidine ABC transporter, substrate-binding component
Hydroxymethylpyrimidine ABC transporter, substrate-binding component
thiC
 
Anoxybacillus flavithermus WK1
 
Bacillus amyloliquefaciens FZB42
 
Bacillus cereus ATCC 14579
*
Bacillus clausii KSM-K16

Site:
position = -182
score = 73.35
sequence = AGAAAGACTAGGGGT...

Gene: ABC1733: Phosphomethylpyrimidine synthase
*
Bacillus halodurans C-125

Site:
position = -195
score = 66.77
sequence = CAGGAGACTAGGGGT...

Gene: BH1431: Phosphomethylpyrimidine synthase
 
Bacillus licheniformis DSM 13
 
Bacillus pumilus SAFR-032
 
Bacillus subtilis subsp. subtilis str. 168
 
Geobacillus kaustophilus HTA426
 
Oceanobacillus iheyensis HTE831
 
Paenibacillus sp. JDR-2

Gene: Pjdr2_5402: Phosphomethylpyrimidine synthase
Phosphomethylpyrimidine synthase
RBAM_005680
 
Anoxybacillus flavithermus WK1
*
Bacillus amyloliquefaciens FZB42

Site:
position = -180
score = 80.89
sequence = AAAGTCACTAGGGGA...

Gene: RBAM_005680: Putative (deoxy)tymidine deoxyribosyltransferase
 
Bacillus cereus ATCC 14579
 
Bacillus clausii KSM-K16
 
Bacillus halodurans C-125
 
Bacillus licheniformis DSM 13
 
Bacillus pumilus SAFR-032
 
Bacillus subtilis subsp. subtilis str. 168
 
Geobacillus kaustophilus HTA426
 
Oceanobacillus iheyensis HTE831
 
Paenibacillus sp. JDR-2
Putative (deoxy)tymidine deoxyribosyltransferase
thyA
 
Anoxybacillus flavithermus WK1
 
Bacillus amyloliquefaciens FZB42

Gene: RBAM_005690: Thymidylate synthase (EC 2.1.1.45)
 
Bacillus cereus ATCC 14579
 
Bacillus clausii KSM-K16
 
Bacillus halodurans C-125
 
Bacillus licheniformis DSM 13
 
Bacillus pumilus SAFR-032
 
Bacillus subtilis subsp. subtilis str. 168
 
Geobacillus kaustophilus HTA426
 
Oceanobacillus iheyensis HTE831
 
Paenibacillus sp. JDR-2
Thymidylate synthase (EC 2.1.1.45)
RBAM_005700
 
Anoxybacillus flavithermus WK1
 
Bacillus amyloliquefaciens FZB42

Gene: RBAM_005700: S-adenosylmethionine (SAM)-dependent methyltransferase
 
Bacillus cereus ATCC 14579
 
Bacillus clausii KSM-K16

Gene: ABC2515: S-adenosylmethionine (SAM)-dependent methyltransferase
 
Bacillus halodurans C-125
 
Bacillus licheniformis DSM 13
 
Bacillus pumilus SAFR-032
 
Bacillus subtilis subsp. subtilis str. 168
 
Geobacillus kaustophilus HTA426
 
Oceanobacillus iheyensis HTE831
 
Paenibacillus sp. JDR-2
S-adenosylmethionine (SAM)-dependent methyltransferase
RBAM_005720
 
Anoxybacillus flavithermus WK1
 
Bacillus amyloliquefaciens FZB42

Gene: RBAM_005720: HAD-superfamily subfamily IIA hydrolase / Nudix superfamily hydrolase
 
Bacillus cereus ATCC 14579
 
Bacillus clausii KSM-K16

Gene: ABC0854: HAD-superfamily subfamily IIA hydrolase / Nudix superfamily hydrolase
 
Bacillus halodurans C-125
 
Bacillus licheniformis DSM 13
 
Bacillus pumilus SAFR-032
 
Bacillus subtilis subsp. subtilis str. 168
 
Geobacillus kaustophilus HTA426
 
Oceanobacillus iheyensis HTE831
 
Paenibacillus sp. JDR-2
HAD-superfamily subfamily IIA hydrolase / Nudix superfamily hydrolase
thiW
 
Anoxybacillus flavithermus WK1
 
Bacillus amyloliquefaciens FZB42
 
Bacillus cereus ATCC 14579
 
Bacillus clausii KSM-K16
 
Bacillus halodurans C-125
 
Bacillus licheniformis DSM 13
 
Bacillus pumilus SAFR-032
 
Bacillus subtilis subsp. subtilis str. 168
 
Geobacillus kaustophilus HTA426
*
Oceanobacillus iheyensis HTE831

Site:
position = -197
score = 79.79
sequence = AAGCAACTACTAGGG...

Gene: OB0476: Substrate-specific component ThiW of predicted thiazole ECF transporter
 
Paenibacillus sp. JDR-2
Substrate-specific component ThiW of predicted thiazole ECF transporter
thiM
*
Anoxybacillus flavithermus WK1

Site:
position = -169
score = 81.87
sequence = CACACTACTAGGGGT...

Gene: Aflv_1345: Hydroxyethylthiazole kinase (EC 2.7.1.50)
 
Bacillus amyloliquefaciens FZB42

Gene: RBAM_035560: Hydroxyethylthiazole kinase (EC 2.7.1.50)
*
Bacillus cereus ATCC 14579

Site:
position = -184
score = 56.3
sequence = AAGAAACACATGGGA...

Gene: BC0419: Hydroxyethylthiazole kinase (EC 2.7.1.50)
 
Bacillus clausii KSM-K16

Gene: ABC2912: Hydroxyethylthiazole kinase (EC 2.7.1.50)
 
Bacillus halodurans C-125

Gene: BH3349: Hydroxyethylthiazole kinase (EC 2.7.1.50)
 
Bacillus licheniformis DSM 13

Gene: BLi04052: Hydroxyethylthiazole kinase (EC 2.7.1.50)
 
Bacillus pumilus SAFR-032

Gene: BPUM_3484: Hydroxyethylthiazole kinase (EC 2.7.1.50)
 
Bacillus subtilis subsp. subtilis str. 168

Gene: BSU38300: Hydroxyethylthiazole kinase (EC 2.7.1.50)
 
Geobacillus kaustophilus HTA426

Gene: GK1509: Hydroxyethylthiazole kinase (EC 2.7.1.50)
*2
Oceanobacillus iheyensis HTE831

Site:
position = -192
score = 86.14
sequence = AAAAATCCACTAGGG...

Gene: OB0643: Hydroxyethylthiazole kinase (EC 2.7.1.50)

Gene: OB0473: Hydroxyethylthiazole kinase (EC 2.7.1.50)
 
Paenibacillus sp. JDR-2
Hydroxyethylthiazole kinase (EC 2.7.1.50)
thiE
 
Anoxybacillus flavithermus WK1

Gene: Aflv_1346: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
 
Bacillus amyloliquefaciens FZB42

Gene: RBAM_035550: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
 
Bacillus cereus ATCC 14579

Gene: BC0420: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
 
Bacillus clausii KSM-K16
 
Bacillus halodurans C-125
 
Bacillus licheniformis DSM 13

Gene: BLi04051: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
 
Bacillus pumilus SAFR-032

Gene: BPUM_3483: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
 
Bacillus subtilis subsp. subtilis str. 168

Gene: BSU38290: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
 
Geobacillus kaustophilus HTA426

Gene: GK1511: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
 
Oceanobacillus iheyensis HTE831

Gene: OB0472: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
 
Paenibacillus sp. JDR-2
Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
ykoF
 
Anoxybacillus flavithermus WK1
 
Bacillus amyloliquefaciens FZB42
 
Bacillus cereus ATCC 14579
 
Bacillus clausii KSM-K16
 
Bacillus halodurans C-125
 
Bacillus licheniformis DSM 13
 
Bacillus pumilus SAFR-032
*
Bacillus subtilis subsp. subtilis str. 168

Site:
position = -210
score = 74.93
sequence = CGGAAAGCACTAGGG...

Gene: BSU13240: Additional substrate-binding component of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
 
Geobacillus kaustophilus HTA426
*
Oceanobacillus iheyensis HTE831

Site:
position = -197
score = 80.64
sequence = TCGTACGCACTAGGG...

Gene: OB0806: Additional substrate-binding component of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
 
Paenibacillus sp. JDR-2
Additional substrate-binding component of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
OB0642
 
Anoxybacillus flavithermus WK1
 
Bacillus amyloliquefaciens FZB42
 
Bacillus cereus ATCC 14579
 
Bacillus clausii KSM-K16
 
Bacillus halodurans C-125
 
Bacillus licheniformis DSM 13
 
Bacillus pumilus SAFR-032
 
Bacillus subtilis subsp. subtilis str. 168
 
Geobacillus kaustophilus HTA426
 
Oceanobacillus iheyensis HTE831

Gene: OB0642: hypothetical protein
 
Paenibacillus sp. JDR-2

Gene: Pjdr2_3336: hypothetical protein
hypothetical protein
ylmB
 
Anoxybacillus flavithermus WK1
*
Bacillus amyloliquefaciens FZB42

Site:
position = -181
score = 68.39
sequence = ATTCACCCTGGGGGT...

Gene: RBAM_015180: N-formyl-4-amino-5-aminomethyl-2-methylpyrimidine deformylase ( EC 3.5.1.- )
 
Bacillus cereus ATCC 14579

Gene: BC0476: N-formyl-4-amino-5-aminomethyl-2-methylpyrimidine deformylase ( EC 3.5.1.- )
*
Bacillus clausii KSM-K16

Site:
position = -173
score = 77.43
sequence = AAAACCGCTAGGGGT...

Gene: ABC0668: N-formyl-4-amino-5-aminomethyl-2-methylpyrimidine deformylase ( EC 3.5.1.- )
*
Bacillus halodurans C-125

Site:
position = -205
score = 67.63
sequence = GAATCCACTAGGGGT...

Gene: BH2678: N-formyl-4-amino-5-aminomethyl-2-methylpyrimidine deformylase ( EC 3.5.1.- )
 
Bacillus licheniformis DSM 13
 
Bacillus pumilus SAFR-032
*
Bacillus subtilis subsp. subtilis str. 168

Site:
position = -188
score = 75.8
sequence = ATTCATCCTAGGGGT...

Gene: BSU15350: N-formyl-4-amino-5-aminomethyl-2-methylpyrimidine deformylase ( EC 3.5.1.- )
 
Geobacillus kaustophilus HTA426
 
Oceanobacillus iheyensis HTE831
 
Paenibacillus sp. JDR-2

Gene: Pjdr2_1816: N-formyl-4-amino-5-aminomethyl-2-methylpyrimidine deformylase ( EC 3.5.1.- )
N-formyl-4-amino-5-aminomethyl-2-methylpyrimidine deformylase ( EC 3.5.1.- )
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulatory Sites [ FASTA format ] DOWNLOAD