Regulog TPP - Bacillales
| Regulator type: | RNA regulatory element |
| Name: | TPP |
| RFAM: | RF00059 |
| Regulation mode: | |
| Biological process: | Thiamine biosynthesis |
| Effector: | Thiamine pyrophosphate |
| Phylum: | Firmicutes |
Member of regulog collections
- By taxonomy - Bacillales
- By RNA motif - TPP
- By effector - Thiamine pyrophosphate
- By pathway - Thiamine biosynthesis
| Genome | Genes | Operons |
|---|---|---|
| Anoxybacillus flavithermus WK1 | 13 | 3 |
| Bacillus amyloliquefaciens FZB42 | 18 | 6 |
| Bacillus cereus ATCC 14579 | 19 | 6 |
| Bacillus clausii KSM-K16 | 12 | 5 |
| Bacillus halodurans C-125 | 8 | 4 |
| Bacillus licheniformis DSM 13 | 13 | 4 |
| Bacillus pumilus SAFR-032 | 13 | 4 |
| Bacillus subtilis subsp. subtilis str. 168 | 14 | 5 |
| Geobacillus kaustophilus HTA426 | 10 | 2 |
| Oceanobacillus iheyensis HTE831 | 13 | 4 |
| Paenibacillus sp. JDR-2 | 10 | 3 |
| Genes | Function | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | ||||||||||||
| thiT |
|
*
Bacillus amyloliquefaciens FZB42 Site: position = -200 score = 62.57 sequence = ATGACCACAAGGGGA... Gene: RBAM_028100: Substrate-specific component ThiT of thiamin ECF transporter |
*
Bacillus cereus ATCC 14579 Site: position = -187 score = 56.17 sequence = GTTATCACTGGGGGA... Gene: BC4808: Substrate-specific component ThiT of thiamin ECF transporter |
|
*
Bacillus halodurans C-125 Site: position = -163 score = 76.98 sequence = ATAACCACTAGGGGT... Gene: BH0830: Substrate-specific component ThiT of thiamin ECF transporter |
*
Bacillus licheniformis DSM 13 Site: position = -210 score = 63.16 sequence = ATGACCACAAGGGGA... Gene: BLi03258: Substrate-specific component ThiT of thiamin ECF transporter |
*
Bacillus pumilus SAFR-032 Site: position = -199 score = 59.27 sequence = ATAACCGCAGGGGGA... Gene: BPUM_2725: Substrate-specific component ThiT of thiamin ECF transporter |
*
Bacillus subtilis subsp. subtilis str. 168 Site: position = -200 score = 61.07 sequence = ATGACCACAAGGGGA... Gene: BSU30990: Substrate-specific component ThiT of thiamin ECF transporter |
|
*
Oceanobacillus iheyensis HTE831 Site: position = -211 score = 59.87 sequence = AAGCCTGCAAGGGGA... Gene: OB1371: Substrate-specific component ThiT of thiamin ECF transporter |
|
Substrate-specific component ThiT of thiamin ECF transporter |
| CRON 2. | ||||||||||||
| thiC |
*
Anoxybacillus flavithermus WK1 Site: position = -213 score = 82.91 sequence = TCATCTACTAGGGGA... Gene: Aflv_1650: Thiamin biosynthesis protein ThiC |
*
Bacillus amyloliquefaciens FZB42 Site: position = -231 score = 82.27 sequence = ATAGTTACTGGGGGT... Gene: RBAM_009060: Thiamin biosynthesis protein ThiC |
*
Bacillus cereus ATCC 14579 Site: position = -229 score = 78.76 sequence = AGTGATAAACTAGGG... Gene: BC5227: Thiamin biosynthesis protein ThiC |
|
*
Bacillus halodurans C-125 Site: position = -253 score = 76.42 sequence = GAAATAACTAGGGGA... Gene: BH1933: Thiamin biosynthesis protein ThiC |
*
Bacillus licheniformis DSM 13 Site: position = -255 score = 81.95 sequence = AGCATTACTAGGGGT... Gene: BLi00940: Thiamin biosynthesis protein ThiC |
*
Bacillus pumilus SAFR-032 Site: position = -238 score = 80.06 sequence = TAAATGTGACTAGGG... Gene: BPUM_2421: Thiamin biosynthesis protein ThiC |
*
Bacillus subtilis subsp. subtilis str. 168 Site: position = -239 score = 81.9 sequence = ATAGTTACTGGGGGT... Gene: BSU08790: Thiamin biosynthesis protein ThiC |
*
Geobacillus kaustophilus HTA426 Site: position = -284 score = 85.83 sequence = TTATCTGCTAGGGGA... Gene: GK0370: Thiamin biosynthesis protein ThiC |
|
*
Paenibacillus sp. JDR-2 Site: position = -407 score = 81.34 sequence = GGAATTCCACTAGGG... Gene: Pjdr2_0731: Thiamin biosynthesis protein ThiC |
Thiamin biosynthesis protein ThiC |
| CRON 3. | ||||||||||||
| thiY2 |
|
|
Gene: BC0426: Thiamin ABC transporter, substrate-binding component |
|
|
|
|
|
|
|
*
Paenibacillus sp. JDR-2 Site: position = -263 score = 60.75 sequence = GTGAATAGCACCGGG... Gene: Pjdr2_3510: Thiamin ABC transporter, substrate-binding component |
Thiamin ABC transporter, substrate-binding component |
| COG0011 |
|
|
*
Bacillus cereus ATCC 14579 Site: position = -202 score = 60.64 sequence = ATTAAGGACCGGGGA... Gene: BC0424: Cytoplasmic thiamin-binding component of thiamin ABC transporter, COG0011 family |
Gene: ABC0588: Cytoplasmic thiamin-binding component of thiamin ABC transporter, COG0011 family |
Gene: BH3874: Cytoplasmic thiamin-binding component of thiamin ABC transporter, COG0011 family |
|
|
|
|
|
Gene: Pjdr2_3509: Cytoplasmic thiamin-binding component of thiamin ABC transporter, COG0011 family |
Cytoplasmic thiamin-binding component of thiamin ABC transporter, COG0011 family |
| thiX2 |
|
|
Gene: BC0425: Thiamin ABC transporter, transmembrane component |
|
|
|
|
|
|
|
Gene: Pjdr2_3508: Thiamin ABC transporter, transmembrane component |
Thiamin ABC transporter, transmembrane component |
| thiZ2 |
|
|
Gene: BC0427: Thiamin ABC transporter, ATPase component |
|
|
|
|
|
|
|
Gene: Pjdr2_3507: Thiamin ABC transporter, ATPase component |
Thiamin ABC transporter, ATPase component |
| COG0084 |
|
|
Gene: BC0234: TatD-related deoxyribonuclease, COG0084 |
|
|
|
|
|
Gene: GK0184: TatD-related deoxyribonuclease, COG0084 |
|
Gene: Pjdr2_3506: TatD-related deoxyribonuclease, COG0084 |
TatD-related deoxyribonuclease, COG0084 |
| CRON 4. | ||||||||||||
| tenA |
*
Anoxybacillus flavithermus WK1 Site: position = -196 score = 90.59 sequence = TGTATTCCACTAGGG... Gene: Aflv_2320: 4-amino-5-aminomethyl-2-methylpyrimidine hydrolase TenA |
*
Bacillus amyloliquefaciens FZB42 Site: position = -192 score = 80.35 sequence = ATGACCACTAGGGGT... Gene: RBAM_011660: 4-amino-5-aminomethyl-2-methylpyrimidine hydrolase TenA |
*2
Bacillus cereus ATCC 14579 Site: position = -232 score = 82.27 sequence = TCATCCACTAGGGGG... Gene: BC2551: 4-amino-5-aminomethyl-2-methylpyrimidine hydrolase TenA Site: position = -360 score = 66.39 sequence = TAGTTTGCTAGGAGA... Site: position = -188 score = 74.62 sequence = GAAACCACTAGGGGT... Gene: BC0742: 4-amino-5-aminomethyl-2-methylpyrimidine hydrolase TenA |
*2
Bacillus clausii KSM-K16 Gene: ABC0669: 4-amino-5-aminomethyl-2-methylpyrimidine hydrolase TenA Site: position = -174 score = 90.72 sequence = GAAGAACCACTAGGG... Gene: ABC0756: 4-amino-5-aminomethyl-2-methylpyrimidine hydrolase TenA |
Gene: BH2679: 4-amino-5-aminomethyl-2-methylpyrimidine hydrolase TenA |
*2
Bacillus licheniformis DSM 13 Site: position = -191 score = 83.46 sequence = TTTTCCACTAGGGGA... Gene: BLi01259: 4-amino-5-aminomethyl-2-methylpyrimidine hydrolase TenA Site: position = -217 score = 86.0 sequence = GGAAGTCCACTAGGG... Gene: BLi04205: 4-amino-5-aminomethyl-2-methylpyrimidine hydrolase TenA |
*2
Bacillus pumilus SAFR-032 Site: position = -187 score = 84.32 sequence = TGATCCACTAGGGGA... Gene: BPUM_1094: 4-amino-5-aminomethyl-2-methylpyrimidine hydrolase TenA Site: position = -192 score = 80.36 sequence = AAAAGTCCACTAGGG... Gene: BPUM_3574: 4-amino-5-aminomethyl-2-methylpyrimidine hydrolase TenA |
*
Bacillus subtilis subsp. subtilis str. 168 Site: position = -186 score = 80.48 sequence = TTAACCACTAGGGGT... Gene: BSU11650: 4-amino-5-aminomethyl-2-methylpyrimidine hydrolase TenA |
*
Geobacillus kaustophilus HTA426 Site: position = -213 score = 90.67 sequence = TCATCCACTAGGGGG... Gene: GK0618: 4-amino-5-aminomethyl-2-methylpyrimidine hydrolase TenA |
2
Oceanobacillus iheyensis HTE831 Gene: OB0641: 4-amino-5-aminomethyl-2-methylpyrimidine hydrolase TenA Gene: OB0475: 4-amino-5-aminomethyl-2-methylpyrimidine hydrolase TenA |
*
Paenibacillus sp. JDR-2 Site: position = -203 score = 54.17 sequence = GCATAATGCGTGCGG... Gene: Pjdr2_5407: 4-amino-5-aminomethyl-2-methylpyrimidine hydrolase TenA |
4-amino-5-aminomethyl-2-methylpyrimidine hydrolase TenA |
| ykoE |
Gene: Aflv_2319: Substrate-specific component YkoE of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine |
*
Bacillus amyloliquefaciens FZB42 Site: position = -294 score = 80.77 sequence = GGAAACGCACTAGGG... Gene: RBAM_013090: Substrate-specific component YkoE of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine |
|
*
Bacillus clausii KSM-K16 Site: position = -200 score = 74.06 sequence = ACAACCACTAGGGGT... Gene: ABC1933: Substrate-specific component YkoE of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine |
|
Gene: BLi04204: Substrate-specific component YkoE of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine |
Gene: BPUM_3573: Substrate-specific component YkoE of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine |
Gene: BSU13230: Substrate-specific component YkoE of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine |
Gene: GK0619: Substrate-specific component YkoE of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine |
Gene: OB0805: Substrate-specific component YkoE of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine |
|
Substrate-specific component YkoE of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine |
| ykoD |
Gene: Aflv_2318: Duplicated ATPase component YkoD of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine |
Gene: RBAM_013080: Duplicated ATPase component YkoD of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine |
|
Gene: ABC1934: Duplicated ATPase component YkoD of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine |
|
Gene: BLi04203: Duplicated ATPase component YkoD of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine |
Gene: BPUM_3572: Duplicated ATPase component YkoD of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine |
Gene: BSU13220: Duplicated ATPase component YkoD of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine |
Gene: GK0620: Duplicated ATPase component YkoD of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine |
Gene: OB0804: Duplicated ATPase component YkoD of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine |
|
Duplicated ATPase component YkoD of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine |
| ykoC |
Gene: Aflv_2317: Transmembrane component YkoC of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine |
Gene: RBAM_013070: Transmembrane component YkoC of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine |
|
Gene: ABC1935: Transmembrane component YkoC of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine |
|
Gene: BLi04202: Transmembrane component YkoC of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine |
Gene: BPUM_3571: Transmembrane component YkoC of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine |
Gene: BSU13210: Transmembrane component YkoC of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine |
Gene: GK0621: Transmembrane component YkoC of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine |
Gene: OB0803: Transmembrane component YkoC of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine |
|
Transmembrane component YkoC of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine |
| tenI |
Gene: Aflv_2316: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) |
Gene: RBAM_011670: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) |
Gene: BC0746: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) |
|
|
Gene: BLi01260: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) |
Gene: BPUM_1095: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) |
Gene: BSU11660: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) |
Gene: GK0622: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) |
|
|
Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) |
| thiO |
Gene: Aflv_2315: Glycine oxidase ThiO (EC 1.4.3.19) |
Gene: RBAM_011680: Glycine oxidase ThiO (EC 1.4.3.19) |
Gene: BC0747: Glycine oxidase ThiO (EC 1.4.3.19) |
Gene: ABC1736: Glycine oxidase ThiO (EC 1.4.3.19) |
Gene: BH1434: Glycine oxidase ThiO (EC 1.4.3.19) |
Gene: BLi01261: Glycine oxidase ThiO (EC 1.4.3.19) |
Gene: BPUM_1096: Glycine oxidase ThiO (EC 1.4.3.19) |
Gene: BSU11670: Glycine oxidase ThiO (EC 1.4.3.19) |
Gene: GK0623: Glycine oxidase ThiO (EC 1.4.3.19) |
|
Gene: Pjdr2_5399: Glycine oxidase ThiO (EC 1.4.3.19) |
Glycine oxidase ThiO (EC 1.4.3.19) |
| thiS |
Gene: Aflv_2314: Sulfur carrier protein ThiS |
Gene: RBAM_011690: Sulfur carrier protein ThiS |
Gene: BC0748: Sulfur carrier protein ThiS |
Gene: ABC1734: Sulfur carrier protein ThiS |
Gene: BH1432: Sulfur carrier protein ThiS |
Gene: BLi01262: Sulfur carrier protein ThiS |
Gene: BPUM_1097: Sulfur carrier protein ThiS |
Gene: BSU11680: Sulfur carrier protein ThiS |
Gene: GK0624: Sulfur carrier protein ThiS |
|
Gene: Pjdr2_5401: Sulfur carrier protein ThiS |
Sulfur carrier protein ThiS |
| thiG |
Gene: Aflv_2313: Thiazole synthase ThiG |
Gene: RBAM_011700: Thiazole synthase ThiG |
Gene: BC0749: Thiazole synthase ThiG |
Gene: ABC1735: Thiazole synthase ThiG |
Gene: BH1433: Thiazole synthase ThiG |
Gene: BLi01263: Thiazole synthase ThiG |
Gene: BPUM_1098: Thiazole synthase ThiG |
Gene: BSU11690: Thiazole synthase ThiG |
Gene: GK0625: Thiazole synthase ThiG |
|
Gene: Pjdr2_5400: Thiazole synthase ThiG |
Thiazole synthase ThiG |
| thiF |
Gene: Aflv_2312: Sulfur carrier protein adenylyltransferase ThiF |
Gene: RBAM_011710: Sulfur carrier protein adenylyltransferase ThiF |
Gene: BC0750: Sulfur carrier protein adenylyltransferase ThiF |
|
|
Gene: BLi01264: Sulfur carrier protein adenylyltransferase ThiF |
Gene: BPUM_1099: Sulfur carrier protein adenylyltransferase ThiF |
Gene: BSU11700: Sulfur carrier protein adenylyltransferase ThiF |
Gene: GK0626: Sulfur carrier protein adenylyltransferase ThiF |
|
|
Sulfur carrier protein adenylyltransferase ThiF |
| thiD |
Gene: Aflv_2311: Phosphomethylpyrimidine kinase (EC 2.7.4.7) |
2
Bacillus amyloliquefaciens FZB42 Gene: RBAM_005710: Phosphomethylpyrimidine kinase (EC 2.7.4.7) Gene: RBAM_011720: Phosphomethylpyrimidine kinase (EC 2.7.4.7) |
Gene: BC0751: Phosphomethylpyrimidine kinase (EC 2.7.4.7) |
*2
Bacillus clausii KSM-K16 Gene: ABC1737: Phosphomethylpyrimidine kinase (EC 2.7.4.7) Site: position = -185 score = 73.53 sequence = TAGATTCCACTAGGG... Gene: ABC1627: Phosphomethylpyrimidine kinase (EC 2.7.4.7) |
Gene: BH1435: Phosphomethylpyrimidine kinase (EC 2.7.4.7) |
Gene: BLi01265: Phosphomethylpyrimidine kinase (EC 2.7.4.7) |
Gene: BPUM_1100: Phosphomethylpyrimidine kinase (EC 2.7.4.7) |
Gene: BSU11710: Phosphomethylpyrimidine kinase (EC 2.7.4.7) |
Gene: GK1510: Phosphomethylpyrimidine kinase (EC 2.7.4.7) |
Gene: OB0474: Phosphomethylpyrimidine kinase (EC 2.7.4.7) |
Gene: Pjdr2_5398: Phosphomethylpyrimidine kinase (EC 2.7.4.7) |
Phosphomethylpyrimidine kinase (EC 2.7.4.7) |
| thiZ |
|
|
Gene: BC0743: Hydroxymethylpyrimidine ABC transporter, ATPase component |
|
Gene: BH2680: Hydroxymethylpyrimidine ABC transporter, ATPase component |
|
|
|
|
|
Gene: Pjdr2_5406: Hydroxymethylpyrimidine ABC transporter, ATPase component |
Hydroxymethylpyrimidine ABC transporter, ATPase component |
| thiX |
|
|
Gene: BC0744: Hydroxymethylpyrimidine ABC transporter, transmembrane component |
|
Gene: BH2681: Hydroxymethylpyrimidine ABC transporter, transmembrane component |
|
|
|
|
|
Gene: Pjdr2_5405: Hydroxymethylpyrimidine ABC transporter, transmembrane component |
Hydroxymethylpyrimidine ABC transporter, transmembrane component |
| thiY |
|
|
Gene: BC0745: Hydroxymethylpyrimidine ABC transporter, substrate-binding component |
|
Gene: BH2682: Hydroxymethylpyrimidine ABC transporter, substrate-binding component |
|
|
|
|
|
Gene: Pjdr2_5404: Hydroxymethylpyrimidine ABC transporter, substrate-binding component |
Hydroxymethylpyrimidine ABC transporter, substrate-binding component |
| thiC |
|
|
|
*
Bacillus clausii KSM-K16 Site: position = -182 score = 73.35 sequence = AGAAAGACTAGGGGT... Gene: ABC1733: Phosphomethylpyrimidine synthase |
*
Bacillus halodurans C-125 Site: position = -195 score = 66.77 sequence = CAGGAGACTAGGGGT... Gene: BH1431: Phosphomethylpyrimidine synthase |
|
|
|
|
|
Gene: Pjdr2_5402: Phosphomethylpyrimidine synthase |
Phosphomethylpyrimidine synthase |
| RBAM_005680 |
|
*
Bacillus amyloliquefaciens FZB42 Site: position = -180 score = 80.89 sequence = AAAGTCACTAGGGGA... Gene: RBAM_005680: Putative (deoxy)tymidine deoxyribosyltransferase |
|
|
|
|
|
|
|
|
|
Putative (deoxy)tymidine deoxyribosyltransferase |
| thyA |
|
Gene: RBAM_005690: Thymidylate synthase (EC 2.1.1.45) |
|
|
|
|
|
|
|
|
|
Thymidylate synthase (EC 2.1.1.45) |
| RBAM_005700 |
|
Gene: RBAM_005700: S-adenosylmethionine (SAM)-dependent methyltransferase |
|
Gene: ABC2515: S-adenosylmethionine (SAM)-dependent methyltransferase |
|
|
|
|
|
|
|
S-adenosylmethionine (SAM)-dependent methyltransferase |
| RBAM_005720 |
|
Gene: RBAM_005720: HAD-superfamily subfamily IIA hydrolase / Nudix superfamily hydrolase |
|
Gene: ABC0854: HAD-superfamily subfamily IIA hydrolase / Nudix superfamily hydrolase |
|
|
|
|
|
|
|
HAD-superfamily subfamily IIA hydrolase / Nudix superfamily hydrolase |
| thiW |
|
|
|
|
|
|
|
|
|
*
Oceanobacillus iheyensis HTE831 Site: position = -197 score = 79.79 sequence = AAGCAACTACTAGGG... Gene: OB0476: Substrate-specific component ThiW of predicted thiazole ECF transporter |
|
Substrate-specific component ThiW of predicted thiazole ECF transporter |
| thiM |
*
Anoxybacillus flavithermus WK1 Site: position = -169 score = 81.87 sequence = CACACTACTAGGGGT... Gene: Aflv_1345: Hydroxyethylthiazole kinase (EC 2.7.1.50) |
Gene: RBAM_035560: Hydroxyethylthiazole kinase (EC 2.7.1.50) |
*
Bacillus cereus ATCC 14579 Site: position = -184 score = 56.3 sequence = AAGAAACACATGGGA... Gene: BC0419: Hydroxyethylthiazole kinase (EC 2.7.1.50) |
Gene: ABC2912: Hydroxyethylthiazole kinase (EC 2.7.1.50) |
Gene: BH3349: Hydroxyethylthiazole kinase (EC 2.7.1.50) |
Gene: BLi04052: Hydroxyethylthiazole kinase (EC 2.7.1.50) |
Gene: BPUM_3484: Hydroxyethylthiazole kinase (EC 2.7.1.50) |
Gene: BSU38300: Hydroxyethylthiazole kinase (EC 2.7.1.50) |
Gene: GK1509: Hydroxyethylthiazole kinase (EC 2.7.1.50) |
*2
Oceanobacillus iheyensis HTE831 Site: position = -192 score = 86.14 sequence = AAAAATCCACTAGGG... Gene: OB0643: Hydroxyethylthiazole kinase (EC 2.7.1.50) Gene: OB0473: Hydroxyethylthiazole kinase (EC 2.7.1.50) |
|
Hydroxyethylthiazole kinase (EC 2.7.1.50) |
| thiE |
Gene: Aflv_1346: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) |
Gene: RBAM_035550: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) |
Gene: BC0420: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) |
|
|
Gene: BLi04051: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) |
Gene: BPUM_3483: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) |
Gene: BSU38290: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) |
Gene: GK1511: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) |
Gene: OB0472: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) |
|
Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) |
| ykoF |
|
|
|
|
|
|
|
*
Bacillus subtilis subsp. subtilis str. 168 Site: position = -210 score = 74.93 sequence = CGGAAAGCACTAGGG... Gene: BSU13240: Additional substrate-binding component of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine |
|
*
Oceanobacillus iheyensis HTE831 Site: position = -197 score = 80.64 sequence = TCGTACGCACTAGGG... Gene: OB0806: Additional substrate-binding component of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine |
|
Additional substrate-binding component of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine |
| OB0642 |
|
|
|
|
|
|
|
|
|
Gene: OB0642: hypothetical protein |
Gene: Pjdr2_3336: hypothetical protein |
hypothetical protein |
| ylmB |
|
*
Bacillus amyloliquefaciens FZB42 Site: position = -181 score = 68.39 sequence = ATTCACCCTGGGGGT... Gene: RBAM_015180: N-formyl-4-amino-5-aminomethyl-2-methylpyrimidine deformylase ( EC 3.5.1.- ) |
Gene: BC0476: N-formyl-4-amino-5-aminomethyl-2-methylpyrimidine deformylase ( EC 3.5.1.- ) |
*
Bacillus clausii KSM-K16 Site: position = -173 score = 77.43 sequence = AAAACCGCTAGGGGT... Gene: ABC0668: N-formyl-4-amino-5-aminomethyl-2-methylpyrimidine deformylase ( EC 3.5.1.- ) |
*
Bacillus halodurans C-125 Site: position = -205 score = 67.63 sequence = GAATCCACTAGGGGT... Gene: BH2678: N-formyl-4-amino-5-aminomethyl-2-methylpyrimidine deformylase ( EC 3.5.1.- ) |
|
|
*
Bacillus subtilis subsp. subtilis str. 168 Site: position = -188 score = 75.8 sequence = ATTCATCCTAGGGGT... Gene: BSU15350: N-formyl-4-amino-5-aminomethyl-2-methylpyrimidine deformylase ( EC 3.5.1.- ) |
|
|
Gene: Pjdr2_1816: N-formyl-4-amino-5-aminomethyl-2-methylpyrimidine deformylase ( EC 3.5.1.- ) |
N-formyl-4-amino-5-aminomethyl-2-methylpyrimidine deformylase ( EC 3.5.1.- ) |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
|
Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |