Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing ykoF gene

Properties
Regulator type: RNA regulatory element
Name: TPP
RFAM: RF00059
Regulation mode:
Biological process: Thiamine biosynthesis
Effector: Thiamine pyrophosphate
Phylum: Firmicutes
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Bacillus subtilis subsp. subtilis str. 168
Position: -210
Score: 74.93
Sequence: CGGAAAGCACTAGGG...
Locus tag: BSU13240
Name: ykoF
Funciton: Additional substrate-binding component of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
Locus tag: BSU13230
Name: ykoE
Funciton: Substrate-specific component YkoE of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
Locus tag: BSU13220
Name: ykoD
Funciton: Duplicated ATPase component YkoD of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
Locus tag: BSU13210
Name: ykoC
Funciton: Transmembrane component YkoC of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
ykoF-ykoE-ykoD-ykoC -210 74.9 CGGAAAGCACTAGGG... BSU13240
Oceanobacillus iheyensis HTE831
Position: -197
Score: 80.64
Sequence: TCGTACGCACTAGGG...
Locus tag: OB0806
Name: ykoF
Funciton: Additional substrate-binding component of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
Locus tag: OB0805
Name: ykoE
Funciton: Substrate-specific component YkoE of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
Locus tag: OB0804
Name: ykoD
Funciton: Duplicated ATPase component YkoD of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
Locus tag: OB0803
Name: ykoC
Funciton: Transmembrane component YkoC of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
ykoF-ykoE-ykoD-ykoC -197 80.6 TCGTACGCACTAGGG... OB0806