Regulon of TPP in Bacillus amyloliquefaciens FZB42

Properties
Regulator type:	RNA regulatory element
Name:	TPP
RFAM:	RF00059
Regulation mode:
Biological process:	Thiamine biosynthesis
Effector:	Thiamine pyrophosphate
Regulog:	TPP - Bacillales
Under regulation:
- Genes	18
- Operons	6

Member of regulog collections

By taxonomy - Bacillales
By RNA motif - TPP
By effector - Thiamine pyrophosphate
By pathway - Thiamine biosynthesis

Regulated operons
	Locus Tag	Name	Function
Position: -180 Score: 80.9 Sequence: AAAGTCACTAGGGGA... Locus tag: RBAM_005680 Name: null Funciton: Putative (deoxy)tymidine deoxyribosyltransferase Locus tag: RBAM_005690 Name: thyA Funciton: Thymidylate synthase (EC 2.1.1.45) Locus tag: RBAM_005700 Name: RBAM_005700 Funciton: S-adenosylmethionine (SAM)-dependent methyltransferase Locus tag: RBAM_005710 Name: thiD Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7) Locus tag: RBAM_005720 Name: null Funciton: HAD-superfamily subfamily IIA hydrolase / Nudix superfamily hydrolase
	RBAM_005680		Putative (deoxy)tymidine deoxyribosyltransferase
	RBAM_005690	thyA	Thymidylate synthase (EC 2.1.1.45)
	RBAM_005700	RBAM_005700	S-adenosylmethionine (SAM)-dependent methyltransferase
	RBAM_005710	thiD	Phosphomethylpyrimidine kinase (EC 2.7.4.7)
	RBAM_005720		HAD-superfamily subfamily IIA hydrolase / Nudix superfamily hydrolase
Position: -200 Score: 62.6 Sequence: ATGACCACAAGGGGA... Locus tag: RBAM_028100 Name: thiT Funciton: Substrate-specific component ThiT of thiamin ECF transporter
	RBAM_028100	thiT	Substrate-specific component ThiT of thiamin ECF transporter
Position: -231 Score: 82.3 Sequence: ATAGTTACTGGGGGT... Locus tag: RBAM_009060 Name: thiC Funciton: Thiamin biosynthesis protein ThiC
	RBAM_009060	thiC	Thiamin biosynthesis protein ThiC
Position: -181 Score: 68.4 Sequence: ATTCACCCTGGGGGT... Locus tag: RBAM_015180 Name: ylmB Funciton: N-formyl-4-amino-5-aminomethyl-2-methylpyrimidine deformylase ( EC 3.5.1.- )
	RBAM_015180	ylmB	N-formyl-4-amino-5-aminomethyl-2-methylpyrimidine deformylase ( EC 3.5.1.- )
Position: -192 Score: 80.3 Sequence: ATGACCACTAGGGGT... Locus tag: RBAM_011660 Name: tenA Funciton: 4-amino-5-aminomethyl-2-methylpyrimidine hydrolase TenA Locus tag: RBAM_011670 Name: tenI Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) Locus tag: RBAM_011680 Name: thiO Funciton: Glycine oxidase ThiO (EC 1.4.3.19) Locus tag: RBAM_011690 Name: thiS Funciton: Sulfur carrier protein ThiS Locus tag: RBAM_011700 Name: thiG Funciton: Thiazole synthase ThiG Locus tag: RBAM_011710 Name: thiF Funciton: Sulfur carrier protein adenylyltransferase ThiF Locus tag: RBAM_011720 Name: thiD Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7)
	RBAM_011660	tenA	4-amino-5-aminomethyl-2-methylpyrimidine hydrolase TenA
	RBAM_011670	tenI	Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
	RBAM_011680	thiO	Glycine oxidase ThiO (EC 1.4.3.19)
	RBAM_011690	thiS	Sulfur carrier protein ThiS
	RBAM_011700	thiG	Thiazole synthase ThiG
	RBAM_011710	thiF	Sulfur carrier protein adenylyltransferase ThiF
	RBAM_011720	thiD	Phosphomethylpyrimidine kinase (EC 2.7.4.7)
Position: -294 Score: 80.8 Sequence: GGAAACGCACTAGGG... Locus tag: RBAM_013090 Name: ykoE Funciton: Substrate-specific component YkoE of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine Locus tag: RBAM_013080 Name: ykoD Funciton: Duplicated ATPase component YkoD of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine Locus tag: RBAM_013070 Name: ykoC Funciton: Transmembrane component YkoC of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
	RBAM_013090	ykoE	Substrate-specific component YkoE of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
	RBAM_013080	ykoD	Duplicated ATPase component YkoD of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
	RBAM_013070	ykoC	Transmembrane component YkoC of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine

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	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulon of TPP in Bacillus amyloliquefaciens FZB42

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --