Regulon of TPP in Bacillus clausii KSM-K16

Properties
Regulator type:	RNA regulatory element
Name:	TPP
RFAM:	RF00059
Regulation mode:
Biological process:	Thiamine biosynthesis
Effector:	Thiamine pyrophosphate
Regulog:	TPP - Bacillales
Under regulation:
- Genes	12
- Operons	5

Member of regulog collections

By taxonomy - Bacillales
By RNA motif - TPP
By effector - Thiamine pyrophosphate
By pathway - Thiamine biosynthesis

Regulated operons
	Locus Tag	Name	Function
Position: -200 Score: 74.1 Sequence: ACAACCACTAGGGGT... Locus tag: ABC1933 Name: ykoE Funciton: Substrate-specific component YkoE of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine Locus tag: ABC1934 Name: ykoD Funciton: Duplicated ATPase component YkoD of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine Locus tag: ABC1935 Name: ykoC Funciton: Transmembrane component YkoC of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
	ABC1933	ykoE	Substrate-specific component YkoE of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
	ABC1934	ykoD	Duplicated ATPase component YkoD of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
	ABC1935	ykoC	Transmembrane component YkoC of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
Position: -182 Score: 73.3 Sequence: AGAAAGACTAGGGGT... Locus tag: ABC1733 Name: thiC Funciton: Phosphomethylpyrimidine synthase Locus tag: ABC1734 Name: thiS Funciton: Sulfur carrier protein ThiS Locus tag: ABC1735 Name: thiG Funciton: Thiazole synthase ThiG Locus tag: ABC1736 Name: thiO Funciton: Glycine oxidase ThiO (EC 1.4.3.19) Locus tag: ABC1737 Name: thiD Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7)
	ABC1733	thiC	Phosphomethylpyrimidine synthase
	ABC1734	thiS	Sulfur carrier protein ThiS
	ABC1735	thiG	Thiazole synthase ThiG
	ABC1736	thiO	Glycine oxidase ThiO (EC 1.4.3.19)
	ABC1737	thiD	Phosphomethylpyrimidine kinase (EC 2.7.4.7)
Position: -173 Score: 77.4 Sequence: AAAACCGCTAGGGGT... Locus tag: ABC0668 Name: ylmB Funciton: N-formyl-4-amino-5-aminomethyl-2-methylpyrimidine deformylase ( EC 3.5.1.- ) Locus tag: ABC0669 Name: tenA Funciton: 4-amino-5-aminomethyl-2-methylpyrimidine hydrolase TenA
	ABC0668	ylmB	N-formyl-4-amino-5-aminomethyl-2-methylpyrimidine deformylase ( EC 3.5.1.- )
	ABC0669	tenA	4-amino-5-aminomethyl-2-methylpyrimidine hydrolase TenA
Position: -174 Score: 90.7 Sequence: GAAGAACCACTAGGG... Locus tag: ABC0756 Name: tenA Funciton: 4-amino-5-aminomethyl-2-methylpyrimidine hydrolase TenA
	ABC0756	tenA	4-amino-5-aminomethyl-2-methylpyrimidine hydrolase TenA
Position: -185 Score: 73.5 Sequence: TAGATTCCACTAGGG... Locus tag: ABC1627 Name: thiD Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7)
	ABC1627	thiD	Phosphomethylpyrimidine kinase (EC 2.7.4.7)

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD