Statistics of regulated genes

Genome	Genes	Operons
Hahella chejuensis KCTC 2396	8	2
Marinobacter aqueolei	4	2
Marinobacter sp. ELB17	5	2
Oceanobacter sp. RED65	8	2
Oceanospirillum sp. MED92	2	1
Marinomonas sp. MWYL1	8	2
Saccharophagus degradans 2-40	9	3
Teredinibacter turnerae T7901	9	3
Cellvibrio japonicus Ueda107	5	2
Chromohalobacter salexigens DSM 3043	4	2
Reinekea sp. MED297	8	2
Alcanivorax borkumensis SK2

Clusters of co-Regulated Orthologous operoNs (CRONs)

Genes													Function
CRON 1.
thiB	* Hahella chejuensis KCTC 2396 Site: position = -191 score = 62.83 sequence = GGCAGTCTCATCGGG... Gene: HCH_01612: Thiamin ABC transporter, substrate-binding component	* Marinobacter aqueolei Site: position = -141 score = 69.65 sequence = ACTCAACTCAACGGG... Gene: Maqu_1200: Thiamin ABC transporter, substrate-binding component	Marinobacter sp. ELB17	Oceanobacter sp. RED65	Oceanospirillum sp. MED92	* Marinomonas sp. MWYL1 Site: position = -200 score = 72.8 sequence = TCATTATCTCATGGG... Gene: Mmwyl1_3472: Thiamin ABC transporter, substrate-binding component	Saccharophagus degradans 2-40	Teredinibacter turnerae T7901	Cellvibrio japonicus Ueda107	Chromohalobacter salexigens DSM 3043	* Reinekea sp. MED297 Site: position = -128 score = 66.29 sequence = CGTTCTTGCCGGGGT... Gene: MED297_13137: Thiamin ABC transporter, substrate-binding component	Alcanivorax borkumensis SK2	Thiamin ABC transporter, substrate-binding component
thiP	Hahella chejuensis KCTC 2396 Gene: HCH_01611: Thiamin ABC transporter, permease component	Marinobacter aqueolei Gene: Maqu_1199: Thiamin ABC transporter, permease component	* Marinobacter sp. ELB17 Site: position = -371 score = 61.11 sequence = GCCTTTCTCAACGGG... Gene: MELB17_12481: Thiamin ABC transporter, permease component	Oceanobacter sp. RED65	Oceanospirillum sp. MED92	Marinomonas sp. MWYL1 Gene: Mmwyl1_3471: Thiamin ABC transporter, permease component	Saccharophagus degradans 2-40	Teredinibacter turnerae T7901	Cellvibrio japonicus Ueda107	Chromohalobacter salexigens DSM 3043	Reinekea sp. MED297 Gene: MED297_13142: Thiamin ABC transporter, permease component	Alcanivorax borkumensis SK2	Thiamin ABC transporter, permease component
thiQ	Hahella chejuensis KCTC 2396 Gene: HCH_01610: Thiamin ABC transporter, ATPase component	Marinobacter aqueolei Gene: Maqu_1198: Thiamin ABC transporter, ATPase component	Marinobacter sp. ELB17 Gene: MELB17_12476: Thiamin ABC transporter, ATPase component	Oceanobacter sp. RED65	Oceanospirillum sp. MED92	Marinomonas sp. MWYL1 Gene: Mmwyl1_3470: Thiamin ABC transporter, ATPase component	Saccharophagus degradans 2-40	Teredinibacter turnerae T7901	Cellvibrio japonicus Ueda107	Chromohalobacter salexigens DSM 3043	Reinekea sp. MED297 Gene: MED297_13147: Thiamin ABC transporter, ATPase component	Alcanivorax borkumensis SK2	Thiamin ABC transporter, ATPase component
CRON 2.
omp_thi	Hahella chejuensis KCTC 2396	Marinobacter aqueolei	Marinobacter sp. ELB17	* Oceanobacter sp. RED65 Site: position = -185 score = 72.82 sequence = AATTATCCAGGGGGA... Gene: RED65_08869: Predicted thiamin-specific outer membrane transporter, TonB-dependent	Oceanospirillum sp. MED92	Marinomonas sp. MWYL1	* Saccharophagus degradans 2-40 Site: position = -182 score = 67.23 sequence = GCGCTCCTTAGGGGA... Gene: Sde_3405: Predicted thiamin-specific outer membrane transporter, TonB-dependent	* Teredinibacter turnerae T7901 Site: position = -176 score = 72.0 sequence = GCTGTCCTTAGGGGT... Gene: TERTU_1246: Predicted thiamin-specific outer membrane transporter, TonB-dependent	Cellvibrio japonicus Ueda107	Chromohalobacter salexigens DSM 3043	Reinekea sp. MED297	Alcanivorax borkumensis SK2	Predicted thiamin-specific outer membrane transporter, TonB-dependent
HCH_01843	Hahella chejuensis KCTC 2396	Marinobacter aqueolei	Marinobacter sp. ELB17	Oceanobacter sp. RED65 Gene: RED65_08874: hypothetical protein	Oceanospirillum sp. MED92	Marinomonas sp. MWYL1	Saccharophagus degradans 2-40 Gene: Sde_3406: hypothetical protein	Teredinibacter turnerae T7901 Gene: TERTU_1247: hypothetical protein	Cellvibrio japonicus Ueda107	Chromohalobacter salexigens DSM 3043	Reinekea sp. MED297	Alcanivorax borkumensis SK2	hypothetical protein
pnuT	Hahella chejuensis KCTC 2396	Marinobacter aqueolei	Marinobacter sp. ELB17	Oceanobacter sp. RED65 Gene: RED65_08879: Predicted thiamin transporter PnuT	Oceanospirillum sp. MED92	Marinomonas sp. MWYL1	Saccharophagus degradans 2-40 Gene: Sde_3407: Predicted thiamin transporter PnuT	Teredinibacter turnerae T7901 Gene: TERTU_1248: Predicted thiamin transporter PnuT	Cellvibrio japonicus Ueda107	Chromohalobacter salexigens DSM 3043	Reinekea sp. MED297	Alcanivorax borkumensis SK2	Predicted thiamin transporter PnuT
thiK	Hahella chejuensis KCTC 2396	Marinobacter aqueolei	Marinobacter sp. ELB17	Oceanobacter sp. RED65 Gene: RED65_08884: Predicted thiamine kinase, aminoglycoside phosphotransferase family	Oceanospirillum sp. MED92	Marinomonas sp. MWYL1	Saccharophagus degradans 2-40 Gene: Sde_3408: Predicted thiamine kinase, aminoglycoside phosphotransferase family	Teredinibacter turnerae T7901 Gene: TERTU_1249: Predicted thiamine kinase, aminoglycoside phosphotransferase family	Cellvibrio japonicus Ueda107	Chromohalobacter salexigens DSM 3043	Reinekea sp. MED297	Alcanivorax borkumensis SK2	Predicted thiamine kinase, aminoglycoside phosphotransferase family
CRON 3.
thiZ	Hahella chejuensis KCTC 2396	Marinobacter aqueolei	Marinobacter sp. ELB17	Oceanobacter sp. RED65	Oceanospirillum sp. MED92	Marinomonas sp. MWYL1	Saccharophagus degradans 2-40	Teredinibacter turnerae T7901	Cellvibrio japonicus Ueda107	* Chromohalobacter salexigens DSM 3043 Site: position = -137 score = 50.21 sequence = TCTCTGGATAGGGGT... Gene: Csal_1932: Hydroxymethylpyrimidine ABC transporter, ATPase component	Reinekea sp. MED297	Alcanivorax borkumensis SK2	Hydroxymethylpyrimidine ABC transporter, ATPase component
thiX	Hahella chejuensis KCTC 2396	Marinobacter aqueolei	Marinobacter sp. ELB17	Oceanobacter sp. RED65	Oceanospirillum sp. MED92	Marinomonas sp. MWYL1	Saccharophagus degradans 2-40	Teredinibacter turnerae T7901	Cellvibrio japonicus Ueda107	Chromohalobacter salexigens DSM 3043 Gene: Csal_1933: Hydroxymethylpyrimidine ABC transporter, transmembrane component	Reinekea sp. MED297	Alcanivorax borkumensis SK2	Hydroxymethylpyrimidine ABC transporter, transmembrane component
thiY	Hahella chejuensis KCTC 2396	Marinobacter aqueolei	Marinobacter sp. ELB17	Oceanobacter sp. RED65	Oceanospirillum sp. MED92	Marinomonas sp. MWYL1	Saccharophagus degradans 2-40	Teredinibacter turnerae T7901	Cellvibrio japonicus Ueda107	Chromohalobacter salexigens DSM 3043 Gene: Csal_1934: Hydroxymethylpyrimidine ABC transporter, substrate-binding component	Reinekea sp. MED297	Alcanivorax borkumensis SK2	Hydroxymethylpyrimidine ABC transporter, substrate-binding component
CRON 4.
thiC	* Hahella chejuensis KCTC 2396 Site: position = -212 score = 79.72 sequence = ACATCTTGTCGGGGT... Gene: HCH_00137: Thiamin biosynthesis protein ThiC	* Marinobacter aqueolei Site: position = -106 score = 60.31 sequence = GCGTCTTGACGGGGT... Gene: Maqu_0803: Thiamin biosynthesis protein ThiC	Marinobacter sp. ELB17	* Oceanobacter sp. RED65 Site: position = -304 score = 64.76 sequence = ACATTAGCTCACGGG... Gene: RED65_02148: Thiamin biosynthesis protein ThiC	Oceanospirillum sp. MED92 Gene: MED92_00795: Thiamin biosynthesis protein ThiC	* Marinomonas sp. MWYL1 Site: position = -287 score = 79.78 sequence = GCCCTACTTGTCGGA... Gene: Mmwyl1_2392: Thiamin biosynthesis protein ThiC	Saccharophagus degradans 2-40 Gene: Sde_0369: Thiamin biosynthesis protein ThiC	Teredinibacter turnerae T7901 Gene: TERTU_3924: Thiamin biosynthesis protein ThiC	Cellvibrio japonicus Ueda107 Gene: CJA_2909: Thiamin biosynthesis protein ThiC	* Chromohalobacter salexigens DSM 3043 Site: position = -214 score = 66.95 sequence = CGATAGCTTGACGGG... Gene: Csal_0959: Thiamin biosynthesis protein ThiC	* Reinekea sp. MED297 Site: position = -204 score = 70.12 sequence = ATTCATCTTGTCGGA... Gene: MED297_07781: Thiamin biosynthesis protein ThiC	Alcanivorax borkumensis SK2 Gene: ABO_2499: Thiamin biosynthesis protein ThiC	Thiamin biosynthesis protein ThiC
thiO	Hahella chejuensis KCTC 2396 Gene: HCH_00138: Glycine oxidase ThiO (EC 1.4.3.19)	Marinobacter aqueolei	Marinobacter sp. ELB17	Oceanobacter sp. RED65 Gene: RED65_02143: Glycine oxidase ThiO (EC 1.4.3.19)	Oceanospirillum sp. MED92	Marinomonas sp. MWYL1	* Saccharophagus degradans 2-40 Site: position = -92 score = 62.63 sequence = GCTCACTTTGTCGGG... Gene: Sde_1456: Glycine oxidase ThiO (EC 1.4.3.19)	* Teredinibacter turnerae T7901 Site: position = -88 score = 52.49 sequence = AATGACTGTCGGGGT... Gene: TERTU_2621: Glycine oxidase ThiO (EC 1.4.3.19)	* Cellvibrio japonicus Ueda107 Site: position = -103 score = 69.69 sequence = CCCTCTTGTCGGGGC... Gene: CJA_2106: Glycine oxidase ThiO (EC 1.4.3.19)	Chromohalobacter salexigens DSM 3043	2 Reinekea sp. MED297 Gene: MED297_07776: Glycine oxidase ThiO (EC 1.4.3.19) Gene: MED297_07796: Glycine oxidase ThiO (EC 1.4.3.19)	Alcanivorax borkumensis SK2	Glycine oxidase ThiO (EC 1.4.3.19)
thiS	Hahella chejuensis KCTC 2396 Gene: HCH_00139: Sulfur carrier protein ThiS	Marinobacter aqueolei Gene: Maqu_3504: Sulfur carrier protein ThiS	Marinobacter sp. ELB17	Oceanobacter sp. RED65 Gene: RED65_02138: Sulfur carrier protein ThiS	Oceanospirillum sp. MED92 Gene: MED92_06583: Sulfur carrier protein ThiS	Marinomonas sp. MWYL1 Gene: Mmwyl1_2390: Sulfur carrier protein ThiS	Saccharophagus degradans 2-40 Gene: Sde_1455: Sulfur carrier protein ThiS	Teredinibacter turnerae T7901 Gene: TERTU_2622: Sulfur carrier protein ThiS	Cellvibrio japonicus Ueda107 Gene: CJA_2107: Sulfur carrier protein ThiS	Chromohalobacter salexigens DSM 3043 Gene: Csal_3147: Sulfur carrier protein ThiS	Reinekea sp. MED297 Gene: MED297_07771: Sulfur carrier protein ThiS	Alcanivorax borkumensis SK2	Sulfur carrier protein ThiS
thiG	Hahella chejuensis KCTC 2396 Gene: HCH_00140: Thiazole biosynthesis protein ThiG	Marinobacter aqueolei Gene: Maqu_3503: Thiazole biosynthesis protein ThiG	Marinobacter sp. ELB17 Gene: MELB17_01465: Thiazole biosynthesis protein ThiG	Oceanobacter sp. RED65 Gene: RED65_02133: Thiazole biosynthesis protein ThiG	Oceanospirillum sp. MED92 Gene: MED92_06588: Thiazole biosynthesis protein ThiG	Marinomonas sp. MWYL1 Gene: Mmwyl1_2389: Thiazole biosynthesis protein ThiG	Saccharophagus degradans 2-40 Gene: Sde_1454: Thiazole biosynthesis protein ThiG	Teredinibacter turnerae T7901 Gene: TERTU_2623: Thiazole biosynthesis protein ThiG	Cellvibrio japonicus Ueda107 Gene: CJA_2108: Thiazole biosynthesis protein ThiG	Chromohalobacter salexigens DSM 3043 Gene: Csal_3146: Thiazole biosynthesis protein ThiG	Reinekea sp. MED297 Gene: MED297_07766: Thiazole biosynthesis protein ThiG	Alcanivorax borkumensis SK2	Thiazole biosynthesis protein ThiG
thiDE	Hahella chejuensis KCTC 2396 Gene: HCH_00141: Phosphomethylpyrimidine kinase (EC 2.7.4.7) / Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)	Marinobacter aqueolei	Marinobacter sp. ELB17	Oceanobacter sp. RED65	Oceanospirillum sp. MED92	Marinomonas sp. MWYL1 Gene: Mmwyl1_2391: Phosphomethylpyrimidine kinase (EC 2.7.4.7) / Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)	Saccharophagus degradans 2-40	Teredinibacter turnerae T7901	Cellvibrio japonicus Ueda107	Chromohalobacter salexigens DSM 3043	Reinekea sp. MED297 Gene: MED297_07761: Phosphomethylpyrimidine kinase (EC 2.7.4.7) / Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)	Alcanivorax borkumensis SK2	Phosphomethylpyrimidine kinase (EC 2.7.4.7) / Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
thiH	Hahella chejuensis KCTC 2396	Marinobacter aqueolei	Marinobacter sp. ELB17	Oceanobacter sp. RED65	Oceanospirillum sp. MED92	Marinomonas sp. MWYL1 Gene: Mmwyl1_2388: 2-iminoacetate synthase (EC 1.3.99.n2)	Saccharophagus degradans 2-40	Teredinibacter turnerae T7901	Cellvibrio japonicus Ueda107	Chromohalobacter salexigens DSM 3043	Reinekea sp. MED297	Alcanivorax borkumensis SK2	2-iminoacetate synthase (EC 1.3.99.n2)
oarX	Hahella chejuensis KCTC 2396	Marinobacter aqueolei	* Marinobacter sp. ELB17 Site: position = -143 score = 59.37 sequence = GGCTCGACACGGGGT... Gene: MELB17_01455: Thiamin-related 3-oxoacyl-[acyl-carrier protein] reductase OarX	Oceanobacter sp. RED65	Oceanospirillum sp. MED92	Marinomonas sp. MWYL1	Saccharophagus degradans 2-40	Teredinibacter turnerae T7901	Cellvibrio japonicus Ueda107	Chromohalobacter salexigens DSM 3043	Reinekea sp. MED297	Alcanivorax borkumensis SK2	Thiamin-related 3-oxoacyl-[acyl-carrier protein] reductase OarX
MELB17_01460	Hahella chejuensis KCTC 2396	Marinobacter aqueolei	Marinobacter sp. ELB17 Gene: MELB17_01460: nitrilotriacetate monooxygenase component A	Oceanobacter sp. RED65	Oceanospirillum sp. MED92	Marinomonas sp. MWYL1	Saccharophagus degradans 2-40	Teredinibacter turnerae T7901	Cellvibrio japonicus Ueda107	Chromohalobacter salexigens DSM 3043	Reinekea sp. MED297	Alcanivorax borkumensis SK2	nitrilotriacetate monooxygenase component A
thiD	Hahella chejuensis KCTC 2396	Marinobacter aqueolei Gene: Maqu_0688: Phosphomethylpyrimidine kinase (EC 2.7.4.7)	Marinobacter sp. ELB17 Gene: MELB17_20341: Phosphomethylpyrimidine kinase (EC 2.7.4.7)	Oceanobacter sp. RED65	* Oceanospirillum sp. MED92 Site: position = -145 score = 66.67 sequence = CATCTTGGTCGGGGT... Gene: MED92_00790: Phosphomethylpyrimidine kinase (EC 2.7.4.7)	Marinomonas sp. MWYL1	*2 Saccharophagus degradans 2-40 Gene: Sde_0829: Phosphomethylpyrimidine kinase (EC 2.7.4.7) Site: position = -207 score = 64.18 sequence = CATTCTTGTCGGGGT... Gene: Sde_0368: Phosphomethylpyrimidine kinase (EC 2.7.4.7)	*2 Teredinibacter turnerae T7901 Site: position = -126 score = 69.84 sequence = TTAACACTTGTCGGG... Gene: TERTU_3925: Phosphomethylpyrimidine kinase (EC 2.7.4.7) Gene: TERTU_3067: Phosphomethylpyrimidine kinase (EC 2.7.4.7)	* Cellvibrio japonicus Ueda107 Site: position = -154 score = 66.82 sequence = CACTTTCTTGTCGGG... Gene: CJA_2910: Phosphomethylpyrimidine kinase (EC 2.7.4.7)	Chromohalobacter salexigens DSM 3043 Gene: Csal_3302: Phosphomethylpyrimidine kinase (EC 2.7.4.7)	Reinekea sp. MED297	Alcanivorax borkumensis SK2 Gene: ABO_0356: Phosphomethylpyrimidine kinase (EC 2.7.4.7)	Phosphomethylpyrimidine kinase (EC 2.7.4.7)

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