Regulon of TPP in Saccharophagus degradans 2-40

Properties
Regulator type:	RNA regulatory element
Name:	TPP
RFAM:	RF00059
Regulation mode:
Biological process:	Thiamine biosynthesis
Effector:	Thiamine pyrophosphate
Regulog:	TPP - Oceanospirillales/Alteromonadales
Under regulation:
- Genes	9
- Operons	3

Member of regulog collections

By taxonomy - Oceanospirillales/Alteromonadales
By RNA motif - TPP
By effector - Thiamine pyrophosphate
By pathway - Thiamine biosynthesis

Regulated operons
	Locus Tag	Name	Function
Position: -182 Score: 67.2 Sequence: GCGCTCCTTAGGGGA... Locus tag: Sde_3405 Name: omp_thi Funciton: Predicted thiamin-specific outer membrane transporter, TonB-dependent Locus tag: Sde_3406 Name: HCH_01843 Funciton: hypothetical protein Locus tag: Sde_3407 Name: pnuT Funciton: Predicted thiamin transporter PnuT Locus tag: Sde_3408 Name: thiK Funciton: Predicted thiamine kinase, aminoglycoside phosphotransferase family
	Sde_3405	omp_thi	Predicted thiamin-specific outer membrane transporter, TonB-dependent
	Sde_3406	HCH_01843	hypothetical protein
	Sde_3407	pnuT	Predicted thiamin transporter PnuT
	Sde_3408	thiK	Predicted thiamine kinase, aminoglycoside phosphotransferase family
Position: -207 Score: 64.2 Sequence: CATTCTTGTCGGGGT... Locus tag: Sde_0368 Name: thiD Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7) Locus tag: Sde_0369 Name: thiC Funciton: Thiamin biosynthesis protein ThiC
	Sde_0368	thiD	Phosphomethylpyrimidine kinase (EC 2.7.4.7)
	Sde_0369	thiC	Thiamin biosynthesis protein ThiC
Position: -92 Score: 62.6 Sequence: GCTCACTTTGTCGGG... Locus tag: Sde_1456 Name: thiO Funciton: Glycine oxidase ThiO (EC 1.4.3.19) Locus tag: Sde_1455 Name: thiS Funciton: Sulfur carrier protein ThiS Locus tag: Sde_1454 Name: thiG Funciton: Thiazole biosynthesis protein ThiG
	Sde_1456	thiO	Glycine oxidase ThiO (EC 1.4.3.19)
	Sde_1455	thiS	Sulfur carrier protein ThiS
	Sde_1454	thiG	Thiazole biosynthesis protein ThiG

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