Regulon of TPP in Reinekea sp. MED297
| Regulator type: | RNA regulatory element |
| Name: | TPP |
| RFAM: | RF00059 |
| Regulation mode: | |
| Biological process: | Thiamine biosynthesis |
| Effector: | Thiamine pyrophosphate |
| Regulog: | TPP - Oceanospirillales/Alteromonadales |
| Under regulation: | |
| - Genes | 8 |
| - Operons | 2 |
Member of regulog collections
- By taxonomy - Oceanospirillales/Alteromonadales
- By RNA motif - TPP
- By effector - Thiamine pyrophosphate
- By pathway - Thiamine biosynthesis
| Locus Tag | Name | Function | |
|---|---|---|---|
|
Position: -128
Score: 66.3 Sequence: CGTTCTTGCCGGGGT...
Locus tag: MED297_13137
Name: thiB Funciton: Thiamin ABC transporter, substrate-binding component
Locus tag: MED297_13142
Name: thiP Funciton: Thiamin ABC transporter, permease component
Locus tag: MED297_13147
Name: thiQ Funciton: Thiamin ABC transporter, ATPase component |
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thiB
|
Thiamin ABC transporter, substrate-binding component
|
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thiP
|
Thiamin ABC transporter, permease component
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thiQ
|
Thiamin ABC transporter, ATPase component
|
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Position: -204
Score: 70.1 Sequence: ATTCATCTTGTCGGA...
Locus tag: MED297_07781
Name: thiC Funciton: Thiamin biosynthesis protein ThiC
Locus tag: MED297_07776
Name: thiO Funciton: Glycine oxidase ThiO (EC 1.4.3.19)
Locus tag: MED297_07771
Name: thiS Funciton: Sulfur carrier protein ThiS
Locus tag: MED297_07766
Name: thiG Funciton: Thiazole biosynthesis protein ThiG
Locus tag: MED297_07761
Name: thiDE Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7) / Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) |
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thiC
|
Thiamin biosynthesis protein ThiC
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thiO
|
Glycine oxidase ThiO (EC 1.4.3.19)
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thiS
|
Sulfur carrier protein ThiS
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thiG
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Thiazole biosynthesis protein ThiG
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thiDE
|
Phosphomethylpyrimidine kinase (EC 2.7.4.7) / Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |