Regulog TPP - Thermoanaerobacterales
| Regulator type: | RNA regulatory element |
| Name: | TPP |
| RFAM: | RF00059 |
| Regulation mode: | |
| Biological process: | Thiamine biosynthesis |
| Effector: | Thiamine pyrophosphate |
| Phylum: | Firmicutes |
Member of regulog collections
- By taxonomy - Thermoanaerobacterales
- By RNA motif - TPP
- By effector - Thiamine pyrophosphate
- By pathway - Thiamine biosynthesis
| Genome | Genes | Operons |
|---|---|---|
| Thermoanaerobacter ethanolicus X514 | 8 | 3 |
| Anaerocellum thermophilum DSM 6725 | 6 | 1 |
| Thermoanaerobacter italicus Ab9 | 4 | 3 |
| Carboxydothermus hydrogenoformans Z-2901 | 8 | 3 |
| Caldicellulosiruptor saccharolyticus DSM 8903 | 7 | 1 |
| Moorella thermoacetica ATCC 39073 | 4 | 3 |
| Thermoanaerobacter tengcongensis MB4 | 6 | 3 |
| Genes | Function | |||||||
|---|---|---|---|---|---|---|---|---|
| CRON 1. | ||||||||
| thiT |
*
Thermoanaerobacter ethanolicus X514 Site: position = -164 score = 78.89 sequence = ATGTCCGCTGGGGGA... Gene: Teth514_0633: Substrate-specific component ThiT of thiamin ECF transporter |
Gene: Athe_0037: Substrate-specific component ThiT of thiamin ECF transporter |
*
Thermoanaerobacter italicus Ab9 Site: position = -166 score = 80.04 sequence = TTATGTCCGCTGGGG... Gene: Thit_2199: Substrate-specific component ThiT of thiamin ECF transporter |
*
Carboxydothermus hydrogenoformans Z-2901 Site: position = -177 score = 90.86 sequence = ACGGCCACTGGGGGT... Gene: CHY_0230: Substrate-specific component ThiT of thiamin ECF transporter |
Gene: Csac_2579: Substrate-specific component ThiT of thiamin ECF transporter |
|
*
Thermoanaerobacter tengcongensis MB4 Site: position = -168 score = 75.99 sequence = TTATGTCCGCTGGGG... Gene: TTE2512: Substrate-specific component ThiT of thiamin ECF transporter |
Substrate-specific component ThiT of thiamin ECF transporter |
| CRON 2. | ||||||||
| thiE |
|
|
|
|
|
*
Moorella thermoacetica ATCC 39073 Site: position = -202 score = 26.12 sequence = TTAAACCGGAGGGGC... Gene: Moth_0547: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) |
|
Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) |
| CRON 3. | ||||||||
| thiS |
|
*
Anaerocellum thermophilum DSM 6725 Site: position = -259 score = 57.04 sequence = TGGTTTTAAGGGGGA... Gene: Athe_0368: Sulfur carrier protein ThiS |
|
|
*
Caldicellulosiruptor saccharolyticus DSM 8903 Site: position = -296 score = 61.88 sequence = TGGTTTTAAGGGGGA... Gene: Csac_0250: Sulfur carrier protein ThiS |
|
|
Sulfur carrier protein ThiS |
| thiG |
|
Gene: Athe_0369: Thiazole biosynthesis protein ThiG |
|
*
Carboxydothermus hydrogenoformans Z-2901 Site: position = -468 score = 63.76 sequence = ATATGGTTTAGGGGA... Gene: CHY_1262: Thiazole biosynthesis protein ThiG |
Gene: Csac_0251: Thiazole biosynthesis protein ThiG |
*
Moorella thermoacetica ATCC 39073 Site: position = -376 score = 70.37 sequence = AACATAAGCAGGGGT... Gene: Moth_1663: Thiazole biosynthesis protein ThiG |
|
Thiazole biosynthesis protein ThiG |
| thiH |
|
Gene: Athe_0370: 2-iminoacetate synthase (EC 1.3.99.n2) |
|
Gene: CHY_1263: 2-iminoacetate synthase (EC 1.3.99.n2) |
Gene: Csac_0252: 2-iminoacetate synthase (EC 1.3.99.n2) |
Gene: Moth_1664: 2-iminoacetate synthase (EC 1.3.99.n2) |
|
2-iminoacetate synthase (EC 1.3.99.n2) |
| thiF |
Gene: Teth514_1158: Sulfur carrier protein adenylyltransferase ThiF |
Gene: Athe_0371: Sulfur carrier protein adenylyltransferase ThiF |
Gene: Thit_0463: Sulfur carrier protein adenylyltransferase ThiF |
Gene: CHY_1264: Sulfur carrier protein adenylyltransferase ThiF |
Gene: Csac_0253: Sulfur carrier protein adenylyltransferase ThiF |
|
Gene: TTE2471: Sulfur carrier protein adenylyltransferase ThiF |
Sulfur carrier protein adenylyltransferase ThiF |
| thiE |
Gene: ThiE: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) |
Gene: Athe_0372: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) |
Gene: Thit_0601: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) |
*
Carboxydothermus hydrogenoformans Z-2901 Site: position = -105 score = 75.96 sequence = AAAAACCTCAGGGGT... Gene: ThiE: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) |
Gene: Csac_0254: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) |
|
Gene: TTE2233: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) |
Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) |
| thiC |
*
Thermoanaerobacter ethanolicus X514 Site: position = -154 score = 80.87 sequence = TATTTGCCACATGGG... Gene: Teth514_0974: Thiamin biosynthesis protein ThiC |
Gene: Athe_0373: Thiamin biosynthesis protein ThiC |
*
Thermoanaerobacter italicus Ab9 Site: position = -152 score = 81.85 sequence = TTTGCCACATGGGGT... Gene: Thit_1845: Thiamin biosynthesis protein ThiC |
Gene: CHY_0747: Thiamin biosynthesis protein ThiC |
Gene: Csac_0255: Thiamin biosynthesis protein ThiC |
*
Moorella thermoacetica ATCC 39073 Site: position = -164 score = 75.47 sequence = AGTTACCCCGGGGGT... Gene: Moth_1401: Thiamin biosynthesis protein ThiC |
*
Thermoanaerobacter tengcongensis MB4 Site: position = -172 score = 85.0 sequence = ACTCAAGTGCTAGGG... Gene: TTE1565: Thiamin biosynthesis protein ThiC |
Thiamin biosynthesis protein ThiC |
| thiD |
*
Thermoanaerobacter ethanolicus X514 Site: position = -159 score = 82.64 sequence = ACAAGTGCTAGGGGA... Gene: ThiD: Phosphomethylpyrimidine kinase (EC 2.7.4.7) |
Gene: ThiD: Phosphomethylpyrimidine kinase (EC 2.7.4.7) |
*
Thermoanaerobacter italicus Ab9 Site: position = -158 score = 86.17 sequence = ACAAATGCTAGGGGA... Gene: ThiD: Phosphomethylpyrimidine kinase (EC 2.7.4.7) |
|
Gene: ThiD: Phosphomethylpyrimidine kinase (EC 2.7.4.7) |
|
*
Thermoanaerobacter tengcongensis MB4 Site: position = -163 score = 85.51 sequence = ATCAAAGTGCTAGGG... Gene: TTE2235: Phosphomethylpyrimidine kinase (EC 2.7.4.7) |
Phosphomethylpyrimidine kinase (EC 2.7.4.7) |
| thiM |
2
Thermoanaerobacter ethanolicus X514 Gene: Teth514_0567: Hydroxyethylthiazole kinase (EC 2.7.1.50) Gene: Teth514_0570: Hydroxyethylthiazole kinase (EC 2.7.1.50) |
|
2
Thermoanaerobacter italicus Ab9 Gene: Thit_0604: Hydroxyethylthiazole kinase (EC 2.7.1.50) Gene: Thit_0606: Hydroxyethylthiazole kinase (EC 2.7.1.50) |
Gene: CHY_0748: Hydroxyethylthiazole kinase (EC 2.7.1.50) |
|
Gene: Moth_2017: Hydroxyethylthiazole kinase (EC 2.7.1.50) |
Gene: TTE2232: Hydroxyethylthiazole kinase (EC 2.7.1.50) |
Hydroxyethylthiazole kinase (EC 2.7.1.50) |
| thiW |
Gene: Teth514_0568: Substrate-specific component ThiW of predicted thiazole ECF transporter |
|
Gene: Thit_0605: Substrate-specific component ThiW of predicted thiazole ECF transporter |
|
|
|
Gene: TTE1731: Substrate-specific component ThiW of predicted thiazole ECF transporter |
Substrate-specific component ThiW of predicted thiazole ECF transporter |
| cytX |
Gene: Teth514_0569: Predicted hydroxymethylpyrimidine transporter CytX |
|
|
|
|
|
Gene: TTE1730: Predicted hydroxymethylpyrimidine transporter CytX |
Predicted hydroxymethylpyrimidine transporter CytX |
| oarX |
|
|
|
|
|
|
Gene: TTE2234: Thiamin-related 3-oxoacyl-[acyl-carrier protein] reductase OarX |
Thiamin-related 3-oxoacyl-[acyl-carrier protein] reductase OarX |
| thiL |
|
|
|
Gene: CHY_0749: Thiamine-monophosphate kinase (EC 2.7.4.16) |
|
Gene: Moth_1157: Thiamine-monophosphate kinase (EC 2.7.4.16) |
|
Thiamine-monophosphate kinase (EC 2.7.4.16) |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |