Regulog ThiR - Thermoproteales
| Regulator type: | Transcription factor |
| Regulator family: | [Other] |
| Regulation mode: | repressor |
| Biological process: | Thiamine transport; Thiamine biosynthesis |
| Effector: | Thiamine phosphate |
| Phylum: | Crenarchaeota |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By trascription factor - ThiR
- By taxonomy - Thermoproteales
- By TF family - [Other]
- By effector - Thiamine phosphate
- By pathway - Thiamine transport
- By pathway - Thiamine biosynthesis
| Genome | Genes | Operons |
|---|---|---|
| Pyrobaculum arsenaticum DSM 13514 | 3 | 2 |
| Pyrobaculum calidifontis JCM 11548 | 3 | 3 |
| Pyrobaculum aerophilum str. IM2 | 6 | 5 |
| Pyrobaculum islandicum DSM 4184 | 6 | 5 |
| Thermoproteus neutrophilus V24Sta | 6 | 5 |
| Genes | Function | |||||
|---|---|---|---|---|---|---|
| CRON 1. | ||||||
| thi4 |
Gene: Pars_1498: Thiazole biosynthetic enzyme Thi4 |
Gene: Pcal_1555: Thiazole biosynthetic enzyme Thi4 |
*
Pyrobaculum aerophilum str. IM2 Site: position = -33 score = 5.22789 sequence = ATAATATTTTTAT Site: position = -66 score = 4.8111 sequence = ATAATAAATTTTT Gene: PAE0175: Thiazole biosynthetic enzyme Thi4 |
*
Pyrobaculum islandicum DSM 4184 Site: position = 3 score = 4.45246 sequence = AAAAGATATTTAT Gene: Pisl_1998: Thiazole biosynthetic enzyme Thi4 |
*
Thermoproteus neutrophilus V24Sta Site: position = -33 score = 4.4476 sequence = AAAATCTATTTAT Gene: Tneu_1052: Thiazole biosynthetic enzyme Thi4 |
Thiazole biosynthetic enzyme Thi4 |
| CRON 2. | ||||||
| thiDN |
Gene: Pars_0839: Phosphomethylpyrimidine kinase (EC 2.7.4.7) / Thiamin-phosphate synthase ThiN (EC 2.5.1.3) |
Gene: Pcal_0240: Phosphomethylpyrimidine kinase (EC 2.7.4.7) / Thiamin-phosphate synthase ThiN (EC 2.5.1.3) |
*
Pyrobaculum aerophilum str. IM2 Site: position = -36 score = 5.1814 sequence = ATAAAAATTTTTT Gene: PAE2535: Phosphomethylpyrimidine kinase (EC 2.7.4.7) / Thiamin-phosphate synthase ThiN (EC 2.5.1.3) |
*
Pyrobaculum islandicum DSM 4184 Site: position = -11 score = 4.76007 sequence = AAAAAATTGTTAT Gene: Pisl_1419: Phosphomethylpyrimidine kinase (EC 2.7.4.7) / Thiamin-phosphate synthase ThiN (EC 2.5.1.3) |
*
Thermoproteus neutrophilus V24Sta Site: position = -51 score = 4.44119 sequence = AAAACGTTTTTAT Gene: Tneu_1881: Phosphomethylpyrimidine kinase (EC 2.7.4.7) / Thiamin-phosphate synthase ThiN (EC 2.5.1.3) |
Phosphomethylpyrimidine kinase (EC 2.7.4.7) / Thiamin-phosphate synthase ThiN (EC 2.5.1.3) |
| CRON 3. | ||||||
| thiT |
*
Pyrobaculum arsenaticum DSM 13514 Site: position = -33 score = 4.41211 sequence = ATAAAATATTAAT Gene: Pars_2195: Predicted thiamin transporter ThiT |
*
Pyrobaculum calidifontis JCM 11548 Site: position = -33 score = 4.68369 sequence = ATAATGTATTTAT Gene: Pcal_0348: Predicted thiamin transporter ThiT |
*
Pyrobaculum aerophilum str. IM2 Site: position = -33 score = 4.8111 sequence = AAAAATTTATTAT Site: position = -66 score = 5.22789 sequence = ATAAAAATATTAT Gene: PAE0176: Predicted thiamin transporter ThiT |
*
Pyrobaculum islandicum DSM 4184 Site: position = -35 score = 5.1814 sequence = ATAAAAATTTTTT Gene: Pisl_1973: Predicted thiamin transporter ThiT |
*
Thermoproteus neutrophilus V24Sta Site: position = -35 score = 5.1814 sequence = ATAAAAATTTTTT Gene: Tneu_1075: Predicted thiamin transporter ThiT |
Predicted thiamin transporter ThiT |
| CRON 4. | ||||||
| thiC |
|
|
*
Pyrobaculum aerophilum str. IM2 Site: position = -18 score = 4.30941 sequence = AAAACTAATTTAT Gene: PAE0333: Thiamin biosynthesis protein ThiC |
*
Pyrobaculum islandicum DSM 4184 Site: position = -33 score = 4.67292 sequence = AAAATCTTTTTAT Gene: Pisl_1450: Thiamin biosynthesis protein ThiC |
*
Thermoproteus neutrophilus V24Sta Site: position = 6 score = 4.39656 sequence = AAAACCTTTTTAT Gene: Tneu_0530: Thiamin biosynthesis protein ThiC |
Thiamin biosynthesis protein ThiC |
| CRON 5. | ||||||
| tenA1 |
*
Pyrobaculum arsenaticum DSM 13514 Site: position = -33 score = 5.05399 sequence = ATAAAGTTTTTAT Gene: Pars_2186: Thiaminase II (EC 3.5.99.2) |
*
Pyrobaculum calidifontis JCM 11548 Site: position = -33 score = 4.17359 sequence = TTAATGTTTTTAT Gene: Pcal_1316: Thiaminase II (EC 3.5.99.2) |
*
Pyrobaculum aerophilum str. IM2 Site: position = -33 score = 5.37286 sequence = ATAAAATTTTTAT Gene: PAE0170: Thiaminase II (EC 3.5.99.2) |
*
Pyrobaculum islandicum DSM 4184 Site: position = -33 score = 5.1814 sequence = AAAAAATTTTTAT Gene: Pisl_1974: Thiaminase II (EC 3.5.99.2) |
*
Thermoproteus neutrophilus V24Sta Site: position = -33 score = 5.1814 sequence = AAAAAATTTTTAT Gene: Tneu_1074: Thiaminase II (EC 3.5.99.2) |
Thiaminase II (EC 3.5.99.2) |
| tenA2 |
Gene: Pars_2187: Thiaminase |
*
Pyrobaculum calidifontis JCM 11548 Site: position = -33 score = 4.21416 sequence = AAAAACCTTTTAT Gene: Pcal_1890: Thiaminase |
Gene: PAE0171: Thiaminase |
Gene: Pisl_1975: Thiaminase |
Gene: Tneu_1073: Thiaminase |
Thiaminase |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |