Statistics of regulated genes

Genome	Genes	Operons
Citrobacter koseri ATCC BAA-895	11	3
Edwardsiella tarda EIB202	7	3
Enterobacter sp. 638	11	3
Erwinia amylovora ATCC 49946	11	4
Erwinia carotovora subsp. atroseptica SCRI1043	11	3
Escherichia coli str. K-12 substr. MG1655	11	3
Klebsiella pneumoniae subsp. pneumoniae MGH 78578	14	4
Photorhabdus luminescens subsp. laumondii TTO1	9	2
Proteus mirabilis HI4320	10	3
Salmonella typhimurium LT2	11	3
Serratia proteamaculans 568	15	4
Yersinia pestis KIM	9	3

Clusters of co-Regulated Orthologous operoNs (CRONs)

Genes													Function
CRON 1.
tenA	Citrobacter koseri ATCC BAA-895	Edwardsiella tarda EIB202	Enterobacter sp. 638	Erwinia amylovora ATCC 49946	Erwinia carotovora subsp. atroseptica SCRI1043	Escherichia coli str. K-12 substr. MG1655	* Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Site: position = -169 score = 67.85 sequence = GCGCTACCGAGGGGT... Gene: KPN_01799: 4-amino-5-aminomethyl-2-methylpyrimidine hydrolase TenA	Photorhabdus luminescens subsp. laumondii TTO1	Proteus mirabilis HI4320	Salmonella typhimurium LT2	* Serratia proteamaculans 568 Site: position = -164 score = 71.75 sequence = GCTCCTCCGAGGGGT... Gene: Spro_3122: 4-amino-5-aminomethyl-2-methylpyrimidine hydrolase TenA	Yersinia pestis KIM	4-amino-5-aminomethyl-2-methylpyrimidine hydrolase TenA
thiZ	Citrobacter koseri ATCC BAA-895	Edwardsiella tarda EIB202	Enterobacter sp. 638	Erwinia amylovora ATCC 49946	Erwinia carotovora subsp. atroseptica SCRI1043	Escherichia coli str. K-12 substr. MG1655	Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Gene: KPN_01800: Hydroxymethylpyrimidine ABC transporter, ATPase component	Photorhabdus luminescens subsp. laumondii TTO1	Proteus mirabilis HI4320	Salmonella typhimurium LT2	Serratia proteamaculans 568 Gene: Spro_3123: Hydroxymethylpyrimidine ABC transporter, ATPase component	Yersinia pestis KIM	Hydroxymethylpyrimidine ABC transporter, ATPase component
thiX	Citrobacter koseri ATCC BAA-895	Edwardsiella tarda EIB202	Enterobacter sp. 638	Erwinia amylovora ATCC 49946	Erwinia carotovora subsp. atroseptica SCRI1043	Escherichia coli str. K-12 substr. MG1655	Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Gene: KPN_01801: Hydroxymethylpyrimidine ABC transporter, transmembrane component	Photorhabdus luminescens subsp. laumondii TTO1	Proteus mirabilis HI4320	Salmonella typhimurium LT2	Serratia proteamaculans 568 Gene: Spro_3124: Hydroxymethylpyrimidine ABC transporter, transmembrane component	Yersinia pestis KIM	Hydroxymethylpyrimidine ABC transporter, transmembrane component
thiY	Citrobacter koseri ATCC BAA-895	Edwardsiella tarda EIB202	Enterobacter sp. 638	Erwinia amylovora ATCC 49946	Erwinia carotovora subsp. atroseptica SCRI1043	Escherichia coli str. K-12 substr. MG1655	Klebsiella pneumoniae subsp. pneumoniae MGH 78578	Photorhabdus luminescens subsp. laumondii TTO1	Proteus mirabilis HI4320	Salmonella typhimurium LT2	Serratia proteamaculans 568 Gene: Spro_3125: Hydroxymethylpyrimidine ABC transporter, substrate-binding component	Yersinia pestis KIM	Hydroxymethylpyrimidine ABC transporter, substrate-binding component
CRON 2.
thiB	* Citrobacter koseri ATCC BAA-895 Site: position = -140 score = 61.68 sequence = CGTCCTCAACGGGGT... Gene: CKO_03314: Thiamin ABC transporter, substrate-binding component	* Edwardsiella tarda EIB202 Site: position = -141 score = 66.11 sequence = CGCCGTCTCAACGGG... Gene: ETAE_0610: Thiamin ABC transporter, substrate-binding component	* Enterobacter sp. 638 Site: position = -133 score = 61.42 sequence = GCTGTTCTCAACGGG... Gene: Ent638_0615: Thiamin ABC transporter, substrate-binding component	* Erwinia amylovora ATCC 49946 Site: position = -135 score = 49.28 sequence = CGCCGGATCAATGGC... Gene: EAM_0677: Thiamin ABC transporter, substrate-binding component	* Erwinia carotovora subsp. atroseptica SCRI1043 Site: position = -176 score = 70.13 sequence = CGTTCTCAACGGGGT... Gene: ECA3844: Thiamin ABC transporter, substrate-binding component	* Escherichia coli str. K-12 substr. MG1655 Site: position = -131 score = 60.86 sequence = GCCGTTCTCAACGGG... Gene: b0068: Thiamin ABC transporter, substrate-binding component	* Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Site: position = -253 score = 49.63 sequence = GCCGTTCTCAACGGG... Gene: KPN_00067: Thiamin ABC transporter, substrate-binding component	* Photorhabdus luminescens subsp. laumondii TTO1 Site: position = -178 score = 65.55 sequence = CGCCATCTCAACGGG... Gene: plu0619: Thiamin ABC transporter, substrate-binding component	* Proteus mirabilis HI4320 Site: position = -156 score = 68.28 sequence = ATGTCTCAACGGGGT... Gene: PMI2322: Thiamin ABC transporter, substrate-binding component	* Salmonella typhimurium LT2 Site: position = -132 score = 64.52 sequence = GCCGAACTCAACGGG... Gene: STM0108: Thiamin ABC transporter, substrate-binding component	* Serratia proteamaculans 568 Site: position = -165 score = 63.65 sequence = CGCCGTCTCAACGGG... Gene: Spro_0737: Thiamin ABC transporter, substrate-binding component	* Yersinia pestis KIM Site: position = -166 score = 39.1 sequence = ACCACCTAACCGCCG... Gene: y3651: Thiamin ABC transporter, substrate-binding component	Thiamin ABC transporter, substrate-binding component
thiP	Citrobacter koseri ATCC BAA-895 Gene: CKO_03315: Thiamin ABC transporter, transmembrane component	Edwardsiella tarda EIB202 Gene: ETAE_0609: Thiamin ABC transporter, transmembrane component	Enterobacter sp. 638 Gene: Ent638_0614: Thiamin ABC transporter, transmembrane component	Erwinia amylovora ATCC 49946 Gene: EAM_0676: Thiamin ABC transporter, transmembrane component	Erwinia carotovora subsp. atroseptica SCRI1043 Gene: ECA3845: Thiamin ABC transporter, transmembrane component	Escherichia coli str. K-12 substr. MG1655 Gene: b0067: Thiamin ABC transporter, transmembrane component	Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Gene: KPN_00066: Thiamin ABC transporter, transmembrane component	Photorhabdus luminescens subsp. laumondii TTO1 Gene: plu0618: Thiamin ABC transporter, transmembrane component	Proteus mirabilis HI4320 Gene: PMI2323: Thiamin ABC transporter, transmembrane component	Salmonella typhimurium LT2 Gene: STM0107: Thiamin ABC transporter, transmembrane component	Serratia proteamaculans 568 Gene: Spro_0736: Thiamin ABC transporter, transmembrane component	Yersinia pestis KIM Gene: y3652: Thiamin ABC transporter, transmembrane component	Thiamin ABC transporter, transmembrane component
thiQ	Citrobacter koseri ATCC BAA-895 Gene: CKO_03316: Thiamin ABC transporter, ATPase component / Thiamine transport ATP-binding protein thiQ	Edwardsiella tarda EIB202 Gene: ETAE_0608: Thiamin ABC transporter, ATPase component / Thiamine transport ATP-binding protein thiQ	Enterobacter sp. 638 Gene: Ent638_0613: Thiamin ABC transporter, ATPase component / Thiamine transport ATP-binding protein thiQ	Erwinia amylovora ATCC 49946 Gene: EAM_0675: Thiamin ABC transporter, ATPase component / Thiamine transport ATP-binding protein thiQ	Erwinia carotovora subsp. atroseptica SCRI1043 Gene: ECA3846: Thiamin ABC transporter, ATPase component / Thiamine transport ATP-binding protein thiQ	Escherichia coli str. K-12 substr. MG1655 Gene: b0066: Thiamin ABC transporter, ATPase component / Thiamine transport ATP-binding protein thiQ	Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Gene: KPN_00065: Thiamin ABC transporter, ATPase component / Thiamine transport ATP-binding protein thiQ	Photorhabdus luminescens subsp. laumondii TTO1 Gene: plu0617: Thiamin ABC transporter, ATPase component / Thiamine transport ATP-binding protein thiQ	Proteus mirabilis HI4320 Gene: PMI2324: Thiamin ABC transporter, ATPase component / Thiamine transport ATP-binding protein thiQ	Salmonella typhimurium LT2 Gene: STM0106: Thiamin ABC transporter, ATPase component / Thiamine transport ATP-binding protein thiQ	Serratia proteamaculans 568 Gene: Spro_0735: Thiamin ABC transporter, ATPase component / Thiamine transport ATP-binding protein thiQ	Yersinia pestis KIM Gene: y3653: Thiamin ABC transporter, ATPase component / Thiamine transport ATP-binding protein thiQ	Thiamin ABC transporter, ATPase component / Thiamine transport ATP-binding protein thiQ
CRON 3.
thiM	* Citrobacter koseri ATCC BAA-895 Site: position = -128 score = 68.4 sequence = TCAACGACTCGGGGT... Gene: CKO_00680: Hydroxyethylthiazole kinase (EC 2.7.1.50)	* Edwardsiella tarda EIB202 Site: position = -130 score = 69.55 sequence = CAACTGACTCGGGGT... Gene: ETAE_1058: Hydroxyethylthiazole kinase (EC 2.7.1.50)	* Enterobacter sp. 638 Site: position = -133 score = 70.12 sequence = GTAATTTGACTCGGG... Gene: Ent638_2711: Hydroxyethylthiazole kinase (EC 2.7.1.50)	* Erwinia amylovora ATCC 49946 Site: position = -137 score = 68.36 sequence = GACCAATGACTCGGG... Gene: EAM_2193: Hydroxyethylthiazole kinase (EC 2.7.1.50)	* Erwinia carotovora subsp. atroseptica SCRI1043 Site: position = -133 score = 66.99 sequence = AGTACATGACTCGGG... Gene: ECA3197: Hydroxyethylthiazole kinase (EC 2.7.1.50)	* Escherichia coli str. K-12 substr. MG1655 Site: position = -132 score = 65.83 sequence = ACCAAACGACTCGGG... Gene: b2104: Hydroxyethylthiazole kinase (EC 2.7.1.50)	* Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Site: position = -133 score = 66.58 sequence = CTATTTTGACTCGGG... Gene: KPN_02551: Hydroxyethylthiazole kinase (EC 2.7.1.50)	Photorhabdus luminescens subsp. laumondii TTO1	Proteus mirabilis HI4320	* Salmonella typhimurium LT2 Site: position = -129 score = 64.07 sequence = GCTTGACGACTCGGG... Gene: STM2147: Hydroxyethylthiazole kinase (EC 2.7.1.50)	* Serratia proteamaculans 568 Site: position = -129 score = 65.11 sequence = ACCGTCTGACTCGGG... Gene: Spro_3578: Hydroxyethylthiazole kinase (EC 2.7.1.50)	Yersinia pestis KIM	Hydroxyethylthiazole kinase (EC 2.7.1.50)
thiD	Citrobacter koseri ATCC BAA-895 Gene: CKO_00681: Phosphomethylpyrimidine kinase (EC 2.7.4.7)	Edwardsiella tarda EIB202 Gene: ETAE_1059: Phosphomethylpyrimidine kinase (EC 2.7.4.7)	Enterobacter sp. 638 Gene: Ent638_2710: Phosphomethylpyrimidine kinase (EC 2.7.4.7)	Erwinia amylovora ATCC 49946 Gene: EAM_2192: Phosphomethylpyrimidine kinase (EC 2.7.4.7)	Erwinia carotovora subsp. atroseptica SCRI1043 Gene: ECA3196: Phosphomethylpyrimidine kinase (EC 2.7.4.7)	Escherichia coli str. K-12 substr. MG1655 Gene: b2103: Phosphomethylpyrimidine kinase (EC 2.7.4.7)	Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Gene: KPN_02550: Phosphomethylpyrimidine kinase (EC 2.7.4.7)	Photorhabdus luminescens subsp. laumondii TTO1 Gene: plu2782: Phosphomethylpyrimidine kinase (EC 2.7.4.7)	* Proteus mirabilis HI4320 Site: position = -140 score = 70.01 sequence = AAGCTTTGGCTCGGG... Gene: PMI1593: Phosphomethylpyrimidine kinase (EC 2.7.4.7)	Salmonella typhimurium LT2 Gene: STM2146: Phosphomethylpyrimidine kinase (EC 2.7.4.7)	Serratia proteamaculans 568 Gene: Spro_3577: Phosphomethylpyrimidine kinase (EC 2.7.4.7)	* Yersinia pestis KIM Site: position = -227 score = 64.46 sequence = ATTCTGACTCGGGGT... Gene: y1373: Phosphomethylpyrimidine kinase (EC 2.7.4.7)	Phosphomethylpyrimidine kinase (EC 2.7.4.7)
CRON 4.
thiC	* Citrobacter koseri ATCC BAA-895 Site: position = -194 score = 72.03 sequence = ACATCTTGTCGGAGT... Gene: CKO_02992: Phosphomethylpyrimidine synthase ThiC	* Edwardsiella tarda EIB202 Site: position = -227 score = 71.68 sequence = CGCTATCTTGTCGGA... Gene: ETAE_0178: Phosphomethylpyrimidine synthase ThiC	* Enterobacter sp. 638 Site: position = -190 score = 74.35 sequence = AAATTTCTTGTCGGA... Gene: Ent638_0207: Phosphomethylpyrimidine synthase ThiC	* Erwinia amylovora ATCC 49946 Site: position = -191 score = 76.37 sequence = CATTATCTTGTCGGA... Gene: EAM_0240: Phosphomethylpyrimidine synthase ThiC	* Erwinia carotovora subsp. atroseptica SCRI1043 Site: position = -253 score = 69.11 sequence = GCAAATCTTGTCGGA... Gene: ECA0232: Phosphomethylpyrimidine synthase ThiC	* Escherichia coli str. K-12 substr. MG1655 Site: position = -182 score = 75.62 sequence = TAATTTCTTGTCGGA... Gene: b3994: Phosphomethylpyrimidine synthase ThiC	* Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Site: position = -211 score = 74.31 sequence = TTTCATCTTGTCGGA... Gene: KPN_04376: Phosphomethylpyrimidine synthase ThiC	* Photorhabdus luminescens subsp. laumondii TTO1 Site: position = -245 score = 72.96 sequence = TACTTTCTTGTCGGA... Gene: plu0486: Phosphomethylpyrimidine synthase ThiC	* Proteus mirabilis HI4320 Site: position = -253 score = 71.06 sequence = CATTCTTGTCGGAGT... Gene: PMI2777: Phosphomethylpyrimidine synthase ThiC	* Salmonella typhimurium LT2 Site: position = -313 score = 55.54 sequence = GGTTATCTTGTCGGA... Gene: STM4164: Phosphomethylpyrimidine synthase ThiC	* Serratia proteamaculans 568 Site: position = -241 score = 71.5 sequence = GGGCATCTTGTCGGA... Gene: Spro_0284: Phosphomethylpyrimidine synthase ThiC	* Yersinia pestis KIM Site: position = -260 score = 71.46 sequence = AAGGCTCTTGTCGGA... Gene: y0491: Phosphomethylpyrimidine synthase ThiC	Phosphomethylpyrimidine synthase ThiC
thiE	Citrobacter koseri ATCC BAA-895 Gene: CKO_02993: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)	Edwardsiella tarda EIB202 Gene: ETAE_0177: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)	Enterobacter sp. 638 Gene: Ent638_0206: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)	Erwinia amylovora ATCC 49946 Gene: EAM_0239: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)	Erwinia carotovora subsp. atroseptica SCRI1043 Gene: ECA0231: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)	Escherichia coli str. K-12 substr. MG1655 Gene: b3993: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)	Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Gene: KPN_04375: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)	Photorhabdus luminescens subsp. laumondii TTO1 Gene: plu0485: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)	Proteus mirabilis HI4320 Gene: PMI2778: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)	Salmonella typhimurium LT2 Gene: STM4163: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)	Serratia proteamaculans 568 Gene: Spro_0283: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)	Yersinia pestis KIM Gene: y0490: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)	Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
thiF	Citrobacter koseri ATCC BAA-895 Gene: CKO_02994: Sulfur carrier protein adenylyltransferase ThiF	Edwardsiella tarda EIB202	Enterobacter sp. 638 Gene: Ent638_0205: Sulfur carrier protein adenylyltransferase ThiF	Erwinia amylovora ATCC 49946 Gene: EAM_P117: Sulfur carrier protein adenylyltransferase ThiF	Erwinia carotovora subsp. atroseptica SCRI1043 Gene: ECA0230: Sulfur carrier protein adenylyltransferase ThiF	Escherichia coli str. K-12 substr. MG1655 Gene: b3992: Sulfur carrier protein adenylyltransferase ThiF	Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Gene: KPN_04374: Sulfur carrier protein adenylyltransferase ThiF	Photorhabdus luminescens subsp. laumondii TTO1 Gene: plu0484: Sulfur carrier protein adenylyltransferase ThiF	Proteus mirabilis HI4320 Gene: PMI2779: Sulfur carrier protein adenylyltransferase ThiF	Salmonella typhimurium LT2 Gene: STM4162: Sulfur carrier protein adenylyltransferase ThiF	Serratia proteamaculans 568 Gene: Spro_0282: Sulfur carrier protein adenylyltransferase ThiF	Yersinia pestis KIM Gene: y0489: Sulfur carrier protein adenylyltransferase ThiF	Sulfur carrier protein adenylyltransferase ThiF
thiS	Citrobacter koseri ATCC BAA-895 Gene: CKO_02995: Sulfur carrier protein ThiS	Edwardsiella tarda EIB202	Enterobacter sp. 638 Gene: Ent638_0204: Sulfur carrier protein ThiS	Erwinia amylovora ATCC 49946 Gene: EAM_P119: Sulfur carrier protein ThiS	Erwinia carotovora subsp. atroseptica SCRI1043 Gene: ECA0229A: Sulfur carrier protein ThiS	Escherichia coli str. K-12 substr. MG1655 Gene: b4407: Sulfur carrier protein ThiS	Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Gene: KPN_04373: Sulfur carrier protein ThiS	Photorhabdus luminescens subsp. laumondii TTO1 Gene: plu0483: Sulfur carrier protein ThiS	Proteus mirabilis HI4320 Gene: PMI2780: Sulfur carrier protein ThiS	Salmonella typhimurium LT2 Gene: STM4161: Sulfur carrier protein ThiS	Serratia proteamaculans 568 Gene: Spro_0281: Sulfur carrier protein ThiS	Yersinia pestis KIM	Sulfur carrier protein ThiS
thiG	Citrobacter koseri ATCC BAA-895 Gene: CKO_02996: Thiazole synthase	Edwardsiella tarda EIB202	Enterobacter sp. 638 Gene: Ent638_0203: Thiazole synthase	Erwinia amylovora ATCC 49946 Gene: EAM_P118: Thiazole synthase	Erwinia carotovora subsp. atroseptica SCRI1043 Gene: ECA0229: Thiazole synthase	Escherichia coli str. K-12 substr. MG1655 Gene: b3991: Thiazole synthase	Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Gene: KPN_04372: Thiazole synthase	Photorhabdus luminescens subsp. laumondii TTO1 Gene: plu0482: Thiazole synthase	Proteus mirabilis HI4320 Gene: PMI2781: Thiazole synthase	Salmonella typhimurium LT2 Gene: STM4160: Thiazole synthase	Serratia proteamaculans 568 Gene: Spro_0280: Thiazole synthase	Yersinia pestis KIM Gene: y0488: Thiazole synthase	Thiazole synthase
thiH	Citrobacter koseri ATCC BAA-895 Gene: CKO_02997: 2-iminoacetate synthase (EC 1.3.99.n2)	Edwardsiella tarda EIB202	Enterobacter sp. 638 Gene: Ent638_0202: 2-iminoacetate synthase (EC 1.3.99.n2)	Erwinia amylovora ATCC 49946	Erwinia carotovora subsp. atroseptica SCRI1043 Gene: ECA0228: 2-iminoacetate synthase (EC 1.3.99.n2)	Escherichia coli str. K-12 substr. MG1655 Gene: b3990: 2-iminoacetate synthase (EC 1.3.99.n2)	Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Gene: KPN_04371: 2-iminoacetate synthase (EC 1.3.99.n2)	Photorhabdus luminescens subsp. laumondii TTO1 Gene: plu0481: 2-iminoacetate synthase (EC 1.3.99.n2)	Proteus mirabilis HI4320 Gene: PMI2782: 2-iminoacetate synthase (EC 1.3.99.n2)	Salmonella typhimurium LT2 Gene: STM4159: 2-iminoacetate synthase (EC 1.3.99.n2)	Serratia proteamaculans 568 Gene: Spro_0279: 2-iminoacetate synthase (EC 1.3.99.n2)	Yersinia pestis KIM Gene: y0487: 2-iminoacetate synthase (EC 1.3.99.n2)	2-iminoacetate synthase (EC 1.3.99.n2)
thiO	Citrobacter koseri ATCC BAA-895	Edwardsiella tarda EIB202	Enterobacter sp. 638	* Erwinia amylovora ATCC 49946 Site: position = -147 score = 62.93 sequence = TAGTTCCTGTCAGGG... Gene: EAM_P120: Glycine oxidase ThiO (EC 1.4.3.19)	Erwinia carotovora subsp. atroseptica SCRI1043	Escherichia coli str. K-12 substr. MG1655	Klebsiella pneumoniae subsp. pneumoniae MGH 78578	Photorhabdus luminescens subsp. laumondii TTO1	Proteus mirabilis HI4320	Salmonella typhimurium LT2	Serratia proteamaculans 568	Yersinia pestis KIM	Glycine oxidase ThiO (EC 1.4.3.19)

Export

	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD