Statistics of regulated genes

Genome	Genes	Operons
Haemophilus influenzae Rd KW20	11	3
Aggregatibacter aphrophilus NJ8700	6	3
Pasteurella multocida subsp. multocida str. Pm70	7	2
Mannheimia succiniciproducens MBEL55E	5	3
Actinobacillus succinogenes 130Z	7	3
Haemophilus somnus 2336	3	1
Actinobacillus pleuropneumoniae serovar 7 str. AP76	15	2
Haemophilus ducreyi 35000HP	1	1
Haemophilus parasuis SH0165	4	2

Clusters of co-Regulated Orthologous operoNs (CRONs)

Genes										Function
CRON 1.
thiZ	* Haemophilus influenzae Rd KW20 Site: position = -161 score = 55.76 sequence = GTTTTTAGTCGGGGT... Gene: HI0354: Hydroxymethylpyrimidine ABC transporter, ATPase component	Aggregatibacter aphrophilus NJ8700	* Pasteurella multocida subsp. multocida str. Pm70 Site: position = -185 score = 62.97 sequence = TGCACTTTAGTCGGG... Gene: PM1266: Hydroxymethylpyrimidine ABC transporter, ATPase component	Mannheimia succiniciproducens MBEL55E	Actinobacillus succinogenes 130Z	Haemophilus somnus 2336	* Actinobacillus pleuropneumoniae serovar 7 str. AP76 Site: position = -401 score = 69.36 sequence = ATTTTTAGTCGGGGT... Gene: APP7_0569: Hydroxymethylpyrimidine ABC transporter, ATPase component	Haemophilus ducreyi 35000HP	Haemophilus parasuis SH0165	Hydroxymethylpyrimidine ABC transporter, ATPase component
thiX	Haemophilus influenzae Rd KW20 Gene: HI0355: Hydroxymethylpyrimidine ABC transporter, transmembrane component	Aggregatibacter aphrophilus NJ8700	Pasteurella multocida subsp. multocida str. Pm70 Gene: PM1265: Hydroxymethylpyrimidine ABC transporter, transmembrane component	Mannheimia succiniciproducens MBEL55E	Actinobacillus succinogenes 130Z	Haemophilus somnus 2336	Actinobacillus pleuropneumoniae serovar 7 str. AP76 Gene: APP7_0570: Hydroxymethylpyrimidine ABC transporter, transmembrane component	Haemophilus ducreyi 35000HP	Haemophilus parasuis SH0165	Hydroxymethylpyrimidine ABC transporter, transmembrane component
thiF	Haemophilus influenzae Rd KW20	Aggregatibacter aphrophilus NJ8700	Pasteurella multocida subsp. multocida str. Pm70	Mannheimia succiniciproducens MBEL55E	Actinobacillus succinogenes 130Z	Haemophilus somnus 2336	2 Actinobacillus pleuropneumoniae serovar 7 str. AP76 Gene: APP7_0571: predicted dinucleotide-utilizing enzyme involved in molybdopterin and thiamine biosynthesis Gene: APP7_0572: predicted dinucleotide-utilizing enzyme involved in molybdopterin and thiamine biosynthesis	Haemophilus ducreyi 35000HP	Haemophilus parasuis SH0165	predicted dinucleotide-utilizing enzyme involved in molybdopterin and thiamine biosynthesis
thiS	Haemophilus influenzae Rd KW20	Aggregatibacter aphrophilus NJ8700	Pasteurella multocida subsp. multocida str. Pm70	Mannheimia succiniciproducens MBEL55E	Actinobacillus succinogenes 130Z	Haemophilus somnus 2336	Actinobacillus pleuropneumoniae serovar 7 str. AP76 Gene: APP7_0573: thiamine biosynthesis protein ThiS	Haemophilus ducreyi 35000HP	Haemophilus parasuis SH0165	thiamine biosynthesis protein ThiS
thiG	Haemophilus influenzae Rd KW20	Aggregatibacter aphrophilus NJ8700	Pasteurella multocida subsp. multocida str. Pm70	Mannheimia succiniciproducens MBEL55E	Actinobacillus succinogenes 130Z	Haemophilus somnus 2336	2 Actinobacillus pleuropneumoniae serovar 7 str. AP76 Gene: APP7_0575: Thiazole biosynthesis protein thiG Gene: APP7_0574: Thiazole biosynthesis protein thiG	Haemophilus ducreyi 35000HP	Haemophilus parasuis SH0165	Thiazole biosynthesis protein thiG
thiH	Haemophilus influenzae Rd KW20	Aggregatibacter aphrophilus NJ8700	Pasteurella multocida subsp. multocida str. Pm70	Mannheimia succiniciproducens MBEL55E	Actinobacillus succinogenes 130Z	Haemophilus somnus 2336	Actinobacillus pleuropneumoniae serovar 7 str. AP76 Gene: APP7_0576: thiazole biosynthesis protein ThiH	Haemophilus ducreyi 35000HP	Haemophilus parasuis SH0165	thiazole biosynthesis protein ThiH
tenA	Haemophilus influenzae Rd KW20 Gene: HI0358: Thiaminase II (EC 3.5.99.2)	Aggregatibacter aphrophilus NJ8700	Pasteurella multocida subsp. multocida str. Pm70 Gene: PM1264: Thiaminase II (EC 3.5.99.2)	Mannheimia succiniciproducens MBEL55E	Actinobacillus succinogenes 130Z	Haemophilus somnus 2336	Actinobacillus pleuropneumoniae serovar 7 str. AP76 Gene: APP7_0577: Thiaminase II (EC 3.5.99.2)	Haemophilus ducreyi 35000HP	Haemophilus parasuis SH0165	Thiaminase II (EC 3.5.99.2)
thiY	Haemophilus influenzae Rd KW20 Gene: HI0357: Hydroxymethylpyrimidine ABC transporter, substrate-binding component	Aggregatibacter aphrophilus NJ8700	Pasteurella multocida subsp. multocida str. Pm70 Gene: PM1263: Hydroxymethylpyrimidine ABC transporter, substrate-binding component	Mannheimia succiniciproducens MBEL55E	Actinobacillus succinogenes 130Z	Haemophilus somnus 2336	2 Actinobacillus pleuropneumoniae serovar 7 str. AP76 Gene: APP7_0578: Hydroxymethylpyrimidine ABC transporter, substrate-binding component Gene: APP7_0579: Hydroxymethylpyrimidine ABC transporter, substrate-binding component	Haemophilus ducreyi 35000HP	Haemophilus parasuis SH0165	Hydroxymethylpyrimidine ABC transporter, substrate-binding component
thiD	Haemophilus influenzae Rd KW20 Gene: HI0416: Phosphomethylpyrimidine kinase (EC 2.7.4.7)	* Aggregatibacter aphrophilus NJ8700 Site: position = -210 score = 58.49 sequence = GTTATTAGTCGGGGT... Gene: NT05HA_0532: Phosphomethylpyrimidine kinase (EC 2.7.4.7)	Pasteurella multocida subsp. multocida str. Pm70 Gene: PM1261: Phosphomethylpyrimidine kinase (EC 2.7.4.7)	* Mannheimia succiniciproducens MBEL55E Site: position = -234 score = 64.9 sequence = TCCTCATTAGTCGGG... Gene: MS0677: Phosphomethylpyrimidine kinase (EC 2.7.4.7)	Actinobacillus succinogenes 130Z Gene: Asuc_1507: Phosphomethylpyrimidine kinase (EC 2.7.4.7)	Haemophilus somnus 2336	2 Actinobacillus pleuropneumoniae serovar 7 str. AP76 Gene: APP7_0580: Phosphomethylpyrimidine kinase (EC 2.7.4.7) Gene: APP7_0581: Phosphomethylpyrimidine kinase (EC 2.7.4.7)	Haemophilus ducreyi 35000HP	Haemophilus parasuis SH0165 Gene: HAPS_1840: Phosphomethylpyrimidine kinase (EC 2.7.4.7)	Phosphomethylpyrimidine kinase (EC 2.7.4.7)
thiE	Haemophilus influenzae Rd KW20 Gene: HI0417: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)	* Aggregatibacter aphrophilus NJ8700 Site: position = -167 score = 57.15 sequence = TTCGCTTGTCGGAGT... Gene: NT05HA_1780: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)	Pasteurella multocida subsp. multocida str. Pm70 Gene: PM1260: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)	Mannheimia succiniciproducens MBEL55E Gene: MS0676: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)	Actinobacillus succinogenes 130Z Gene: Asuc_1508: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)	Haemophilus somnus 2336	Actinobacillus pleuropneumoniae serovar 7 str. AP76 Gene: APP7_0582: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)	Haemophilus ducreyi 35000HP	Haemophilus parasuis SH0165 Gene: HAPS_1839: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)	Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
thiB	* Haemophilus influenzae Rd KW20 Site: position = -139 score = 57.87 sequence = AAGCCTAGTCGGGGT... Gene: HI1019: Thiamin ABC transporter, substrate-binding component	Aggregatibacter aphrophilus NJ8700 Gene: NT05HA_0533: Thiamin ABC transporter, substrate-binding component	* Pasteurella multocida subsp. multocida str. Pm70 Site: position = -129 score = 62.12 sequence = ACTCTTAGTCGGGGT... Gene: PM0376: Thiamin ABC transporter, substrate-binding component	* Mannheimia succiniciproducens MBEL55E Site: position = -136 score = 60.91 sequence = TCTGTTCTCAACGGG... Gene: MS1526: Thiamin ABC transporter, substrate-binding component	* Actinobacillus succinogenes 130Z Site: position = -210 score = 43.16 sequence = GGTTCTCATCGGGGT... Gene: Asuc_1129: Thiamin ABC transporter, substrate-binding component	* Haemophilus somnus 2336 Site: position = -156 score = 64.76 sequence = TCCGACTTAGTCGGG... Gene: HSM_1488: Thiamin ABC transporter, substrate-binding component	* Actinobacillus pleuropneumoniae serovar 7 str. AP76 Site: position = -164 score = 62.15 sequence = CGTTCTCATTGGGGG... Gene: APP7_0176: Thiamin ABC transporter, substrate-binding component	* Haemophilus ducreyi 35000HP Site: position = -154 score = 62.57 sequence = TGTTCTCATTGGGGT... Gene: HD0601: Thiamin ABC transporter, substrate-binding component	* Haemophilus parasuis SH0165 Site: position = -146 score = 63.36 sequence = TGTTCTCATCGGGGT... Gene: HAPS_1254: Thiamin ABC transporter, substrate-binding component	Thiamin ABC transporter, substrate-binding component
thiP	Haemophilus influenzae Rd KW20 Gene: HI1020: Thiamin ABC transporter, transmembrane component	Aggregatibacter aphrophilus NJ8700 Gene: NT05HA_0534: Thiamin ABC transporter, transmembrane component	Pasteurella multocida subsp. multocida str. Pm70 Gene: PM0377: Thiamin ABC transporter, transmembrane component	Mannheimia succiniciproducens MBEL55E Gene: MS1525: Thiamin ABC transporter, transmembrane component	Actinobacillus succinogenes 130Z Gene: Asuc_1130: Thiamin ABC transporter, transmembrane component	Haemophilus somnus 2336 Gene: HSM_1487: Thiamin ABC transporter, transmembrane component	Actinobacillus pleuropneumoniae serovar 7 str. AP76 Gene: APP7_1372: Thiamin ABC transporter, transmembrane component	Haemophilus ducreyi 35000HP Gene: HD0230: Thiamin ABC transporter, transmembrane component	Haemophilus parasuis SH0165 Gene: HAPS_1087: Thiamin ABC transporter, transmembrane component	Thiamin ABC transporter, transmembrane component
thiQ	Haemophilus influenzae Rd KW20 Gene: HI1021: Thiamin ABC transporter, ATPase component	Aggregatibacter aphrophilus NJ8700 Gene: NT05HA_0535: Thiamin ABC transporter, ATPase component	Pasteurella multocida subsp. multocida str. Pm70 Gene: PM0378: Thiamin ABC transporter, ATPase component	Mannheimia succiniciproducens MBEL55E Gene: MS1524: Thiamin ABC transporter, ATPase component	Actinobacillus succinogenes 130Z Gene: Asuc_1131: Thiamin ABC transporter, ATPase component	Haemophilus somnus 2336 Gene: HSM_1486: Thiamin ABC transporter, ATPase component	Actinobacillus pleuropneumoniae serovar 7 str. AP76 Gene: APP7_1371: Thiamin ABC transporter, ATPase component	Haemophilus ducreyi 35000HP Gene: HD0231: Thiamin ABC transporter, ATPase component	Haemophilus parasuis SH0165 Gene: HAPS_1361: Thiamin ABC transporter, ATPase component	Thiamin ABC transporter, ATPase component
thiM	* Haemophilus influenzae Rd KW20 Site: position = -211 score = 54.95 sequence = ACTTTTAGTCGGGGT... Gene: HI0415: Hydroxyethylthiazole kinase (EC 2.7.1.50)	Aggregatibacter aphrophilus NJ8700	Pasteurella multocida subsp. multocida str. Pm70 Gene: PM1262: Hydroxyethylthiazole kinase (EC 2.7.1.50)	Mannheimia succiniciproducens MBEL55E	* Actinobacillus succinogenes 130Z Site: position = -201 score = 66.11 sequence = CCCATTAGTCGGGGT... Gene: Asuc_1506: Hydroxyethylthiazole kinase (EC 2.7.1.50)	Haemophilus somnus 2336	Actinobacillus pleuropneumoniae serovar 7 str. AP76	Haemophilus ducreyi 35000HP	* Haemophilus parasuis SH0165 Site: position = -262 score = 69.61 sequence = GACATTTAAGTCGGG... Gene: HAPS_1841: Hydroxyethylthiazole kinase (EC 2.7.1.50)	Hydroxyethylthiazole kinase (EC 2.7.1.50)
thiU	2 Haemophilus influenzae Rd KW20 Gene: HI0281: Predicted thiazole transporter ThiU Gene: HI0418: Predicted thiazole transporter ThiU	Aggregatibacter aphrophilus NJ8700	Pasteurella multocida subsp. multocida str. Pm70 Gene: PM1259: Predicted thiazole transporter ThiU	Mannheimia succiniciproducens MBEL55E	Actinobacillus succinogenes 130Z	Haemophilus somnus 2336	Actinobacillus pleuropneumoniae serovar 7 str. AP76	Haemophilus ducreyi 35000HP	Haemophilus parasuis SH0165 Gene: HAPS_1072: Predicted thiazole transporter ThiU	Predicted thiazole transporter ThiU
CRON 2.
afuA	Haemophilus influenzae Rd KW20	* Aggregatibacter aphrophilus NJ8700 Site: position = -188 score = 56.48 sequence = CCCGTTAGTCGGGGT... Gene: NT05HA_1226: ABC transporter substrate-binding protein	Pasteurella multocida subsp. multocida str. Pm70	* Mannheimia succiniciproducens MBEL55E Site: position = -272 score = 59.51 sequence = GCCGTTAGTCGGGGT... Gene: MS1370: ABC transporter substrate-binding protein	* Actinobacillus succinogenes 130Z Site: position = -150 score = 60.11 sequence = TTCCCGTTAGTCGGG... Gene: Asuc_1267: ABC transporter substrate-binding protein	Haemophilus somnus 2336	Actinobacillus pleuropneumoniae serovar 7 str. AP76	Haemophilus ducreyi 35000HP	Haemophilus parasuis SH0165	ABC transporter substrate-binding protein

Export

	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD