Regulon of PerR in Lactobacillus fermentum IFO 3956

Properties
Regulator type:	Transcription factor
TF locus tag:	LAF_1362
Regulator family:	FUR
Regulation mode:	repressor
Biological process:	Manganese homeostasis; Oxidative stress response; Iron homeostasis
Effector:	Iron ion, (Fe2+); Manganese ion, (Mn2+); Hydrogen peroxide
Regulog:	PerR - Lactobacillaceae
Statistics of regulated genes:
- Genes	6
- Operons	4
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 49 sites [see more]

Member of regulog collections

By taxonomy - Lactobacillaceae
By TF family - FUR
By effector - Iron ion, (Fe2+)
By effector - Manganese ion, (Mn2+)
By effector - Hydrogen peroxide
By pathway - Manganese homeostasis
By pathway - Oxidative stress response
By pathway - Iron homeostasis

Regulated operons
	Locus Tag	Name	Function
Position: -32 Score: 5 Sequence: TGATAATCGTTCTAA Locus tag: LAF_0409 Name: ahpC Funciton: Alkyl hydroperoxide reductase protein C (EC 1.6.4.-) Locus tag: LAF_0410 Name: ahpF Funciton: Alkyl hydroperoxide reductase protein F (EC 1.6.4.-)
	LAF_0409	ahpC	Alkyl hydroperoxide reductase protein C (EC 1.6.4.-)
	LAF_0410	ahpF	Alkyl hydroperoxide reductase protein F (EC 1.6.4.-)
Position: -109 Score: 5.3 Sequence: TTATAATCATTTTAA Position: -30 Score: 4.8 Sequence: TTATAAGTTTTCTAA Locus tag: LAF_1361 Name: ycnB Funciton: Predicted permease
	LAF_1361	ycnB	Predicted permease
Position: -103 Score: 5.3 Sequence: TTAGAATTCTTCTAA Position: -39 Score: 5.7 Sequence: TTATAATGGTTCTAA Locus tag: LAF_1546 Name: pcl2 Funciton: Predicted membrane protein Locus tag: LAF_1545 Name: pcl1 Funciton: Predicted membrane protein
	LAF_1546	pcl2	Predicted membrane protein
	LAF_1545	pcl1	Predicted membrane protein
Position: -27 Score: 5.6 Sequence: TTAAAATGATTATAA Locus tag: LAF_1362 Name: perR Funciton: Peroxide stress response transcriptional regulator PerR, Fur family
	LAF_1362	perR	Peroxide stress response transcriptional regulator PerR, Fur family

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD