Profile of regulator PerR in Lactobacillaceae
Properties
| Regulator family: |
FUR |
| Regulation mode: |
repressor |
| Biological process: |
Manganese homeostasis; Oxidative stress response; Iron homeostasis |
| Effector: |
Iron ion, (Fe2+); Manganese ion, (Mn2+); Hydrogen peroxide |
| Regulog: |
PerR - Lactobacillaceae |
Member of regulog collections
Transcription factor binding sites
|
Locus Tag |
Name |
Position |
Score |
Sequence |
|
Lactobacillus brevis ATCC 367
|
|
LVIS_0392 |
cadA |
-52 |
4.6 |
CAATAATTGTTATAA |
|
LVIS_B09 |
npr |
-90 |
5.9 |
TTAGAATGATTCTAA |
|
LVIS_1881 |
pcl2 |
-98 |
5.6 |
TAAGAATTATTCTAA |
|
LVIS_1917 |
ycnB |
-39 |
5.2 |
TAAGAATATTTCTAA |
|
LVIS_1882 |
perR |
-186 |
5.5 |
TTAGAATAATTCTTA |
|
LVIS_0086 |
ahpC |
-82 |
4.9 |
TTAGAATCATTCTTG |
|
Lactobacillus casei ATCC 334
|
|
LSEI_2506 |
ahpC |
-31 |
5.5 |
TAATAATCATTCTAA |
|
LSEI_0397 |
npr |
-74 |
4.7 |
TTGGAACTATTCTAA |
|
LSEI_2799 |
cadA |
-46 |
5.2 |
TTGTAATGGTTATAA |
|
LSEI_2799 |
cadA |
-80 |
5 |
TTATATTCGTTCTAA |
|
LSEI_2417 |
cueO |
-192 |
5.3 |
TTAGATTAATTCTAA |
|
LSEI_2588 |
ybbL |
-40 |
5.8 |
TTAGAATGATTATAA |
|
Lactobacillus fermentum IFO 3956
|
|
LAF_0409 |
ahpC |
-32 |
5 |
TGATAATCGTTCTAA |
|
LAF_1546 |
pcl2 |
-103 |
5.3 |
TTAGAATTCTTCTAA |
|
LAF_1546 |
pcl2 |
-39 |
5.7 |
TTATAATGGTTCTAA |
|
LAF_1361 |
ycnB |
-109 |
5.3 |
TTATAATCATTTTAA |
|
LAF_1361 |
ycnB |
-30 |
4.8 |
TTATAAGTTTTCTAA |
|
LAF_1362 |
perR |
-27 |
5.6 |
TTAAAATGATTATAA |
|
Lactobacillus plantarum WCFS1
|
|
lp_2544 |
npr |
-95 |
5.1 |
TTAGAATAATTACAA |
|
lp_3327 |
cadA |
-93 |
5.4 |
TTAGAATCATTCTTA |
|
lp_3247 |
perR |
-63 |
4.8 |
TTGGAATCCTTCTAA |
|
lp_3247 |
perR |
-79 |
5 |
TAGTAATGTTTCTAA |
|
lp_3225 |
ybbL |
-36 |
6 |
TTATAATGATTCTAA |
|
lp_3360 |
pcl2 |
-37 |
5.6 |
TAATAATGATTATAA |
|
lp_0355 |
cueO |
-88 |
5.6 |
TTAAAATAATTCTAA |
|
Lactobacillus reuteri JCM 1112
|
|
LAR_1232 |
perR |
-107 |
5.3 |
TTAGAATAATTATTA |
|
LAR_1232 |
perR |
-31 |
5.5 |
TTATAATTATTTTAA |
|
LAR_1019 |
ahpC |
-94 |
5.6 |
TTAGAATTGTTCTAA |
|
LAR_1019 |
ahpC |
-33 |
5.7 |
TAAGAATGATTCTAA |
|
LAR_1418 |
pcl2 |
-102 |
5.4 |
TTTTAATGATTCTAA |
|
LAR_1418 |
pcl2 |
-38 |
6 |
TTATAATGATTCTAA |
|
LAR_1231 |
ycnB |
-107 |
5.4 |
TTAAAATAATTATAA |
|
LAR_1231 |
ycnB |
-31 |
5.6 |
TAATAATTATTCTAA |
|
Lactobacillus rhamnosus GG
|
|
LGG_02803 |
cadA |
-80 |
5 |
TTATATTCGTTCTAA |
|
LGG_02803 |
cadA |
-46 |
5.2 |
TTGTAATGGTTATAA |
|
LGG_00491 |
npr |
-75 |
5.5 |
TTGTAATTATTCTAA |
|
LGG_02565 |
ybbL |
-35 |
5 |
TTAGAATGGTTACAA |
|
LGG_02415 |
cueO |
-72 |
4.8 |
TTAGATTAATTCCAA |
|
Lactobacillus sakei subsp. sakei 23K
|
|
LSA0466 |
perR |
-38 |
4.7 |
TGATAATGATTATCA |
|
LSA1194 |
pcl2 |
-43 |
5.6 |
TTATAATGGTTATAA |
|
LSA0969 |
cadA |
-65 |
5.3 |
TGATAATAATTCTAA |
|
LSA0575 |
npr |
-61 |
5 |
TTGTAATAATTATTA |
|
Lactobacillus salivarius subsp. salivarius UCC118
|
|
LSL_1367 |
perR |
-33 |
4.8 |
TTATAAAAGTTATAA |
|
LSL_1578 |
ycnB |
-64 |
4.6 |
TTACAAAAATTCTAA |
|
LSL_0409 |
pcl2 |
-38 |
5.5 |
TTATAATTTTTCTAA |
|
LSL_1684 |
ybbL |
-38 |
5.5 |
TTATAATTTTTCTAA |
|
LSL_0169 |
cadA |
-93 |
5.5 |
TTATAATTTTTCTAA |
|
Pediococcus pentosaceus ATCC 25745
|
|
PEPE_0043 |
pcl2 |
-37 |
5.7 |
TTAAAATGATTCTAA |
|
PEPE_0502 |
cueO |
-73 |
5.3 |
TTAGATTAATTCTAA |
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