Regulon of PerR in Lactobacillus reuteri JCM 1112
| Regulator type: | Transcription factor |
| TF locus tag: | LAR_1232 |
| Regulator family: | FUR |
| Regulation mode: | repressor |
| Biological process: | Manganese homeostasis; Oxidative stress response; Iron homeostasis |
| Effector: | Iron ion, (Fe2+); Manganese ion, (Mn2+); Hydrogen peroxide |
| Regulog: | PerR - Lactobacillaceae |
| Statistics of regulated genes: | |
| - Genes | 6 |
| - Operons | 4 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Lactobacillaceae
- By TF family - FUR
- By effector - Iron ion, (Fe2+)
- By effector - Manganese ion, (Mn2+)
- By effector - Hydrogen peroxide
- By pathway - Manganese homeostasis
- By pathway - Oxidative stress response
- By pathway - Iron homeostasis
| Locus Tag | Name | Function | |
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Position: -94
Score: 5.6 Sequence: TTAGAATTGTTCTAA
Position: -33
Score: 5.7 Sequence: TAAGAATGATTCTAA
Locus tag: LAR_1019
Name: ahpC Funciton: Alkyl hydroperoxide reductase protein C (EC 1.6.4.-)
Locus tag: LAR_1018
Name: ahpF Funciton: Alkyl hydroperoxide reductase protein F (EC 1.6.4.-) |
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ahpC
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Alkyl hydroperoxide reductase protein C (EC 1.6.4.-)
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ahpF
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Alkyl hydroperoxide reductase protein F (EC 1.6.4.-)
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Position: -102
Score: 5.4 Sequence: TTTTAATGATTCTAA
Position: -38
Score: 6 Sequence: TTATAATGATTCTAA
Locus tag: LAR_1418
Name: pcl2 Funciton: Predicted membrane protein
Locus tag: LAR_1417
Name: pcl1 Funciton: Predicted membrane protein |
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pcl2
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Predicted membrane protein
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pcl1
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Predicted membrane protein
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Position: -107
Score: 5.4 Sequence: TTAAAATAATTATAA
Position: -31
Score: 5.6 Sequence: TAATAATTATTCTAA
Locus tag: LAR_1231
Name: ycnB Funciton: Predicted permease |
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ycnB
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Predicted permease
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Position: -107
Score: 5.3 Sequence: TTAGAATAATTATTA
Position: -31
Score: 5.5 Sequence: TTATAATTATTTTAA
Locus tag: LAR_1232
Name: perR Funciton: Peroxide stress response transcriptional regulator PerR, Fur family |
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perR
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Peroxide stress response transcriptional regulator PerR, Fur family
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |