Regulon of T-box(Met) in Lactobacillus fermentum IFO 3956
| Regulator type: | RNA regulatory element |
| Name: | T-box |
| RFAM: | RF00230 |
| Regulation mode: | |
| Biological process: | Amino acid metabolism |
| Effector: | Met-tRNA |
| Regulog: | T-box(Met) - Lactobacillaceae |
| Under regulation: | |
| - Genes | 13 |
| - Operons | 6 |
Member of regulog collections
- By taxonomy - Lactobacillaceae
- By RNA motif - T-box
- By effector - Met-tRNA
- By pathway - Amino acid metabolism
| Locus Tag | Name | Function | |
|---|---|---|---|
|
Position: -284
Score: 72.8 Sequence: GAAAAGTTAGAAAGA...
Locus tag: LAF_0793
Name: metQ2 Funciton: Methionine ABC transporter substrate-binding protein
Locus tag: LAF_0794
Name: msrA Funciton: Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11) |
|||
|
metQ2
|
Methionine ABC transporter substrate-binding protein
|
||
|
msrA
|
Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11)
|
||
|
Position: -280
Score: 76.1 Sequence: TGTTCACGTTGATGA...
Locus tag: LAF_0814
Name: metB Funciton: Cystathionine gamma-lyase (EC 4.4.1.1)
Locus tag: LAF_0815
Name: metI Funciton: Cystathionine gamma-synthase (EC 2.5.1.48) |
|||
|
metB
|
Cystathionine gamma-lyase (EC 4.4.1.1)
|
||
|
metI
|
Cystathionine gamma-synthase (EC 2.5.1.48)
|
||
|
Position: -317
Score: 90.3 Sequence: AAAACATATCGAAAA...
Locus tag: LAF_0053
Name: metQ Funciton: Methionine ABC transporter substrate-binding protein
Locus tag: LAF_0054
Name: metN Funciton: Methionine ABC transporter ATP-binding protein
Locus tag: LAF_0055
Name: metP Funciton: Methionine ABC transporter permease protein
Locus tag: LAF_0056
Name: hmrB Funciton: N-acyl-L-amino acid amidohydrolase |
|||
|
metQ
|
Methionine ABC transporter substrate-binding protein
|
||
|
metN
|
Methionine ABC transporter ATP-binding protein
|
||
|
metP
|
Methionine ABC transporter permease protein
|
||
|
hmrB
|
N-acyl-L-amino acid amidohydrolase
|
||
|
Position: -328
Score: 81.7 Sequence: ATAAGTTGCTGAGAA...
Locus tag: LAF_0302
Name: metE2 Funciton: Methionine synthase II, vitamin-B12 independent (EC 2.1.1.14) |
|||
|
metE2
|
Methionine synthase II, vitamin-B12 independent (EC 2.1.1.14)
|
||
|
Position: -274
Score: 80.5 Sequence: ATAAATTTCGTTGAT...
Locus tag: LAF_0826
Name: metA Funciton: Homoserine O-succinyltransferase (EC 2.3.1.46)
Locus tag: LAF_0825
Name: hom Funciton: Homoserine dehydrogenase (EC 1.1.1.3) |
|||
|
metA
|
Homoserine O-succinyltransferase (EC 2.3.1.46)
|
||
|
hom
|
Homoserine dehydrogenase (EC 1.1.1.3)
|
||
|
Position: -316
Score: 72.1 Sequence: AGAAACAGCTGAGAA...
Locus tag: LAF_1601
Name: metE2 Funciton: Methionine synthase II, vitamin-B12 independent (EC 2.1.1.14)
Locus tag: LAF_1600
Name: rhc Funciton: S-ribosylhomocysteine lyase (EC 4.4.1.21) / Autoinducer-2 production protein LuxS |
|||
|
metE2
|
Methionine synthase II, vitamin-B12 independent (EC 2.1.1.14)
|
||
|
rhc
|
S-ribosylhomocysteine lyase (EC 4.4.1.21) / Autoinducer-2 production protein LuxS
|
||
|
Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |