Regulog CggR - Lactobacillaceae

Properties
Regulator type:	Transcription factor
Regulator family:	SorC
Regulation mode:	repressor
Biological process:	Glycolysis
Effector:	Fructose-1,6-bisphosphate
Phylum:	Firmicutes
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 11 sites [see more]

Member of regulog collections

By taxonomy - Lactobacillaceae
By TF family - SorC
By effector - Fructose-1,6-bisphosphate
By pathway - Glycolysis

Statistics of regulated genes
Genome	Genes	Operons
Lactobacillus acidophilus NCFM	4	1
Lactobacillus brevis ATCC 367	5	1
Lactobacillus casei ATCC 334	5	1
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365	4	1
Lactobacillus fermentum IFO 3956
Lactobacillus helveticus DPC 4571	4	1
Lactobacillus johnsonii NCC 533	5	1
Lactobacillus plantarum WCFS1	5	1
Lactobacillus reuteri JCM 1112
Lactobacillus rhamnosus GG	5	1
Lactobacillus sakei subsp. sakei 23K	5	1
Lactobacillus salivarius subsp. salivarius UCC118	5	1
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293
Oenococcus oeni PSU-1
Pediococcus pentosaceus ATCC 25745	5	1

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes																Function

CRON 1.
cggR	* Lactobacillus acidophilus NCFM Site: position = 1 score = 7.96728 sequence = TGGATTCGGACTTTTCTTTGCTCGAAGCGCTCGTTCC Gene: LBA0697: Transcriptional regulator of central glycolytic gene, SorC family	* Lactobacillus brevis ATCC 367 Site: position = 1 score = 6.45179 sequence = TGCATGAGGATTGGCAATGGGTAGAGGCCATCATGCC Gene: LVIS_0660: Transcriptional regulator of central glycolytic gene, SorC family	* Lactobacillus casei ATCC 334 Site: position = 1 score = 7.55953 sequence = TGCATACTGAACTTGCGTGGCTCAAAGCGATCGCGCC Gene: LSEI_0966: Transcriptional regulator of central glycolytic gene, SorC family	* Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 Site: position = 1 score = 6.92848 sequence = TGAACACGGATTTATCCCTGCTCGAACTGCTTGTTCC Gene: LBUL_0566: Transcriptional regulator of central glycolytic gene, SorC family	Lactobacillus fermentum IFO 3956	* Lactobacillus helveticus DPC 4571 Site: position = 1 score = 7.91524 sequence = TGAATTCGGACTTTTCTTTGCTCGAAGCGCTCGTTCC Gene: lhv_0742: Transcriptional regulator of central glycolytic gene, SorC family	* Lactobacillus johnsonii NCC 533 Site: position = 1 score = 6.05604 sequence = TGGACTCGGATTTAACCTTGTTGCAAAGCTTAGTTCC Gene: LJ0871: Transcriptional regulator of central glycolytic gene, SorC family	* Lactobacillus plantarum WCFS1 Site: position = 1 score = 6.69215 sequence = TGCATTCAGATATTCAATGGATTGAGGCAATTGCCCC Gene: lp_0788: Transcriptional regulator of central glycolytic gene, SorC family	Lactobacillus reuteri JCM 1112	* Lactobacillus rhamnosus GG Site: position = 1 score = 7.55953 sequence = TGCATACTGAACTTGCGTGGCTCAAAGCGATCGCGCC Gene: LGG_00932: Transcriptional regulator of central glycolytic gene, SorC family	* Lactobacillus sakei subsp. sakei 23K Site: position = 1 score = 6.46863 sequence = TGCGCGATGAGTTATCTGCAATAGAAGCGGTTGCGCC Gene: LSA0603: Transcriptional regulator of central glycolytic gene, SorC family	* Lactobacillus salivarius subsp. salivarius UCC118 Site: position = 1 score = 6.75933 sequence = TGCGCGAGGAAGTAGAGTTGATTGAGTCAATCGTTCC Gene: LSL_1167: Transcriptional regulator of central glycolytic gene, SorC family	Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 Gene: LEUM_0630: Transcriptional regulator of central glycolytic gene, SorC family	Oenococcus oeni PSU-1	* Pediococcus pentosaceus ATCC 25745 Site: position = 4 score = 5.97702 sequence = ATGATAATGAGATGGATTTATTAGAATCTGTTGTTCC Gene: PEPE_0458: Transcriptional regulator of central glycolytic gene, SorC family	Transcriptional regulator of central glycolytic gene, SorC family
gap	Lactobacillus acidophilus NCFM Gene: LBA0698: NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)	Lactobacillus brevis ATCC 367 Gene: LVIS_0661: NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)	Lactobacillus casei ATCC 334 Gene: LSEI_0967: NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)	Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 Gene: LBUL_0567: NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)	Lactobacillus fermentum IFO 3956 Gene: LAF_0363: NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)	Lactobacillus helveticus DPC 4571 Gene: lhv_0743: NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)	Lactobacillus johnsonii NCC 533 Gene: LJ0872: NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)	Lactobacillus plantarum WCFS1 Gene: lp_0789: NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)	Lactobacillus reuteri JCM 1112 Gene: LAR_0381: NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)	Lactobacillus rhamnosus GG Gene: LGG_00933: NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)	Lactobacillus sakei subsp. sakei 23K Gene: LSA0604: NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)	Lactobacillus salivarius subsp. salivarius UCC118 Gene: LSL_1166: NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)	Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 Gene: LEUM_0305: NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)	Oenococcus oeni PSU-1 Gene: OEOE_0404: NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)	Pediococcus pentosaceus ATCC 25745 Gene: PEPE_0459: NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)	NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)
pgk	Lactobacillus acidophilus NCFM Gene: LBA0699: Phosphoglycerate kinase (EC 2.7.2.3)	Lactobacillus brevis ATCC 367 Gene: LVIS_0662: Phosphoglycerate kinase (EC 2.7.2.3)	Lactobacillus casei ATCC 334 Gene: LSEI_0968: Phosphoglycerate kinase (EC 2.7.2.3)	Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 Gene: LBUL_0568: Phosphoglycerate kinase (EC 2.7.2.3)	Lactobacillus fermentum IFO 3956 Gene: LAF_0364: Phosphoglycerate kinase (EC 2.7.2.3)	Lactobacillus helveticus DPC 4571 Gene: lhv_0744: Phosphoglycerate kinase (EC 2.7.2.3)	Lactobacillus johnsonii NCC 533 Gene: LJ0873: Phosphoglycerate kinase (EC 2.7.2.3)	Lactobacillus plantarum WCFS1 Gene: lp_0790: Phosphoglycerate kinase (EC 2.7.2.3)	Lactobacillus reuteri JCM 1112 Gene: LAR_0382: Phosphoglycerate kinase (EC 2.7.2.3)	Lactobacillus rhamnosus GG Gene: LGG_00934: Phosphoglycerate kinase (EC 2.7.2.3)	Lactobacillus sakei subsp. sakei 23K Gene: LSA0605: Phosphoglycerate kinase (EC 2.7.2.3)	Lactobacillus salivarius subsp. salivarius UCC118 Gene: LSL_1165: Phosphoglycerate kinase (EC 2.7.2.3)	Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 Gene: LEUM_1921: Phosphoglycerate kinase (EC 2.7.2.3)	Oenococcus oeni PSU-1 Gene: OEOE_0638: Phosphoglycerate kinase (EC 2.7.2.3)	Pediococcus pentosaceus ATCC 25745 Gene: PEPE_0460: Phosphoglycerate kinase (EC 2.7.2.3)	Phosphoglycerate kinase (EC 2.7.2.3)
tpiA	Lactobacillus acidophilus NCFM Gene: LBA0700: Triosephosphate isomerase (EC 5.3.1.1)	Lactobacillus brevis ATCC 367 Gene: LVIS_0663: Triosephosphate isomerase (EC 5.3.1.1)	Lactobacillus casei ATCC 334 Gene: LSEI_0969: Triosephosphate isomerase (EC 5.3.1.1)	Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 Gene: LBUL_0569: Triosephosphate isomerase (EC 5.3.1.1)	2 Lactobacillus fermentum IFO 3956 Gene: LAF_0365: Triosephosphate isomerase (EC 5.3.1.1) Gene: LAF_0415: Triosephosphate isomerase (EC 5.3.1.1)	Lactobacillus helveticus DPC 4571 Gene: lhv_0745: Triosephosphate isomerase (EC 5.3.1.1)	Lactobacillus johnsonii NCC 533 Gene: LJ0874: Triosephosphate isomerase (EC 5.3.1.1)	Lactobacillus plantarum WCFS1 Gene: lp_0791: Triosephosphate isomerase (EC 5.3.1.1)	Lactobacillus reuteri JCM 1112 Gene: LAR_0383: Triosephosphate isomerase (EC 5.3.1.1)	Lactobacillus rhamnosus GG Gene: LGG_00935: Triosephosphate isomerase (EC 5.3.1.1)	Lactobacillus sakei subsp. sakei 23K Gene: LSA0606: Triosephosphate isomerase (EC 5.3.1.1)	Lactobacillus salivarius subsp. salivarius UCC118 Gene: LSL_1164: Triosephosphate isomerase (EC 5.3.1.1)	Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 Gene: LEUM_0239: Triosephosphate isomerase (EC 5.3.1.1)	Oenococcus oeni PSU-1 Gene: OEOE_1652: Triosephosphate isomerase (EC 5.3.1.1)	Pediococcus pentosaceus ATCC 25745 Gene: PEPE_0461: Triosephosphate isomerase (EC 5.3.1.1)	Triosephosphate isomerase (EC 5.3.1.1)
enoA1	Lactobacillus acidophilus NCFM	Lactobacillus brevis ATCC 367 Gene: LVIS_0664: Enolase (EC 4.2.1.11)	Lactobacillus casei ATCC 334 Gene: LSEI_0970: Enolase (EC 4.2.1.11)	Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365	Lactobacillus fermentum IFO 3956 Gene: LAF_0366: Enolase (EC 4.2.1.11)	Lactobacillus helveticus DPC 4571	Lactobacillus johnsonii NCC 533 Gene: LJ0875: Enolase (EC 4.2.1.11)	Lactobacillus plantarum WCFS1 Gene: lp_0792: Enolase (EC 4.2.1.11)	Lactobacillus reuteri JCM 1112 Gene: LAR_0384: Enolase (EC 4.2.1.11)	Lactobacillus rhamnosus GG Gene: LGG_00936: Enolase (EC 4.2.1.11)	Lactobacillus sakei subsp. sakei 23K Gene: LSA0607: Enolase (EC 4.2.1.11)	Lactobacillus salivarius subsp. salivarius UCC118 Gene: LSL_1163: Enolase (EC 4.2.1.11)	Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 Gene: LEUM_0240: Enolase (EC 4.2.1.11)	Oenococcus oeni PSU-1 Gene: OEOE_1650: Enolase (EC 4.2.1.11)	Pediococcus pentosaceus ATCC 25745 Gene: PEPE_0462: Enolase (EC 4.2.1.11)	Enolase (EC 4.2.1.11)

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

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	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulog CggR - Lactobacillaceae

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --