Regulon of PyrR in Lactobacillus johnsonii NCC 533
| Regulator type: | RNA regulatory element |
| Name: | PyrR |
| RFAM: | RF00515 |
| Regulation mode: | |
| Biological process: | Pyrimidine metabolism |
| Effector: | PyrR |
| Regulog: | PyrR - Lactobacillaceae |
| Under regulation: | |
| - Genes | 9 |
| - Operons | 4 |
Member of regulog collections
- By taxonomy - Lactobacillaceae
- By RNA motif - PyrR
- By effector - PyrR
- By pathway - Pyrimidine metabolism
| Locus Tag | Name | Function | |
|---|---|---|---|
|
Position: -115
Score: 25.8 Sequence: TAAACTTTAAACGGT...
Locus tag: LJ1282
Name: pyrF Funciton: Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23)
Locus tag: LJ1283
Name: pyrE Funciton: Orotate phosphoribosyltransferase (EC 2.4.2.10) |
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pyrF
|
Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23)
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pyrE
|
Orotate phosphoribosyltransferase (EC 2.4.2.10)
|
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Position: -158
Score: 55.6 Sequence: GATGACCTTTAATAT...
Locus tag: LJ0709
Name: pyrP Funciton: Xanthine/uracil permease |
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pyrP
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Xanthine/uracil permease
|
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Position: -126
Score: 46.5 Sequence: GTCAACCATTTAATT...
Locus tag: LJ1279
Name: pyrB Funciton: Aspartate carbamoyltransferase (EC 2.1.3.2)
Locus tag: LJ1278
Name: pyrC Funciton: Dihydroorotase (EC 3.5.2.3)
Locus tag: LJ1277
Name: carA Funciton: Carbamoyl-phosphate synthase small chain (EC 6.3.5.5)
Locus tag: LJ1276
Name: carB Funciton: Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)
Locus tag: LJ1275
Name: pyrR Funciton: Uracil phosphoribosyltransferase (EC 2.4.2.9) / Pyrimidine operon regulatory protein PyrR |
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pyrB
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Aspartate carbamoyltransferase (EC 2.1.3.2)
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pyrC
|
Dihydroorotase (EC 3.5.2.3)
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carA
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Carbamoyl-phosphate synthase small chain (EC 6.3.5.5)
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carB
|
Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)
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pyrR
|
Uracil phosphoribosyltransferase (EC 2.4.2.9) / Pyrimidine operon regulatory protein PyrR
|
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Position: -98
Score: 61.1 Sequence: AATGTCCTTTAAAAT...
Locus tag: LJ1280
Name: pyrR Funciton: Uracil phosphoribosyltransferase (EC 2.4.2.9) / Pyrimidine operon regulatory protein PyrR |
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pyrR
|
Uracil phosphoribosyltransferase (EC 2.4.2.9) / Pyrimidine operon regulatory protein PyrR
|
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |