Regulog FucR - Lactobacillaceae
| Regulator type: | Transcription factor |
| Regulator family: | DeoR |
| Regulation mode: | repressor |
| Biological process: | Fucose utilization |
| Effector: | L-fuculose-1-phosphate |
| Phylum: | Firmicutes |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Lactobacillaceae
- By TF family - DeoR
- By effector - L-fuculose-1-phosphate
- By pathway - Fucose utilization
| Genome | Genes | Operons |
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| Lactobacillus acidophilus NCFM | ||
| Lactobacillus brevis ATCC 367 | ||
| Lactobacillus casei ATCC 334 | ||
| Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 | ||
| Lactobacillus fermentum IFO 3956 | ||
| Lactobacillus helveticus DPC 4571 | ||
| Lactobacillus johnsonii NCC 533 | ||
| Lactobacillus plantarum WCFS1 | ||
| Lactobacillus reuteri JCM 1112 | ||
| Lactobacillus rhamnosus GG | 4 | 1 |
| Lactobacillus sakei subsp. sakei 23K | ||
| Lactobacillus salivarius subsp. salivarius UCC118 | ||
| Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 | ||
| Oenococcus oeni PSU-1 | ||
| Pediococcus pentosaceus ATCC 25745 |
| Genes | Function | |||||||||||||||
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| CRON 1. | ||||||||||||||||
| fucI |
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Lactobacillus rhamnosus GG Site: position = -154 score = 5.80561 sequence = CTGTGAAGAAAATTGACGA Gene: LGG_02685: L-fucose isomerase (EC 5.3.1.25) |
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L-fucose isomerase (EC 5.3.1.25) |
| fucK |
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Gene: LGG_02684: L-fuculokinase (EC 2.7.1.51) |
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L-fuculokinase (EC 2.7.1.51) |
| fucT |
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Gene: LGG_02683: Predicted fucose transporter |
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Predicted fucose transporter |
| fucU |
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Gene: LGG_02682: L-fucose mutarotase (EC 5.1.3.n2) |
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L-fucose mutarotase (EC 5.1.3.n2) |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |