Regulon of PerR in Lactobacillus casei ATCC 334
| Regulator type: | Transcription factor |
| TF locus tag: | LSEI_0869 |
| Regulator family: | FUR |
| Regulation mode: | repressor |
| Biological process: | Manganese homeostasis; Oxidative stress response; Iron homeostasis |
| Effector: | Iron ion, (Fe2+); Manganese ion, (Mn2+); Hydrogen peroxide |
| Regulog: | PerR - Lactobacillaceae |
| Statistics of regulated genes: | |
| - Genes | 7 |
| - Operons | 5 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Lactobacillaceae
- By TF family - FUR
- By effector - Iron ion, (Fe2+)
- By effector - Manganese ion, (Mn2+)
- By effector - Hydrogen peroxide
- By pathway - Manganese homeostasis
- By pathway - Oxidative stress response
- By pathway - Iron homeostasis
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -192
Score: 5.3 Sequence: TTAGATTAATTCTAA
Locus tag: LSEI_2417
Name: cueO Funciton: Predicted copper oxidase
Locus tag: LSEI_2416
Name: ycnB Funciton: Predicted permease |
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cueO
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Predicted copper oxidase
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ycnB
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Predicted permease
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Position: -31
Score: 5.5 Sequence: TAATAATCATTCTAA
Locus tag: LSEI_2506
Name: ahpC Funciton: Alkyl hydroperoxide reductase protein C (EC 1.6.4.-) |
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ahpC
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Alkyl hydroperoxide reductase protein C (EC 1.6.4.-)
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Position: -74
Score: 4.7 Sequence: TTGGAACTATTCTAA
Locus tag: LSEI_0397
Name: npr Funciton: NADH peroxidase (EC 1.11.1.1) |
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npr
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NADH peroxidase (EC 1.11.1.1)
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Position: -40
Score: 5.8 Sequence: TTAGAATGATTATAA
Locus tag: LSEI_2588
Name: ybbL Funciton: Predicted ABC transporter, ATP-binding protein
Locus tag: LSEI_2589
Name: ybbM Funciton: Predicted ABC transporter, permease protein |
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ybbL
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Predicted ABC transporter, ATP-binding protein
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ybbM
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Predicted ABC transporter, permease protein
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Position: -80
Score: 5 Sequence: TTATATTCGTTCTAA
Position: -46
Score: 5.2 Sequence: TTGTAATGGTTATAA
Locus tag: LSEI_2799
Name: cadA Funciton: Predicted cation-transporting ATP-ase |
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cadA
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Predicted cation-transporting ATP-ase
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |