Statistics of regulated genes

Genome	Genes	Operons
Lactobacillus acidophilus NCFM
Lactobacillus brevis ATCC 367	2	2
Lactobacillus casei ATCC 334	4	2
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365
Lactobacillus fermentum IFO 3956	1	1
Lactobacillus helveticus DPC 4571
Lactobacillus johnsonii NCC 533
Lactobacillus plantarum WCFS1	4	2
Lactobacillus reuteri JCM 1112	1	1
Lactobacillus rhamnosus GG	4	2
Lactobacillus sakei subsp. sakei 23K	5	3
Lactobacillus salivarius subsp. salivarius UCC118	1	1
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293
Oenococcus oeni PSU-1
Pediococcus pentosaceus ATCC 25745

Clusters of co-Regulated Orthologous operoNs (CRONs)

Genes																Function
CRON 1.
mntH	Lactobacillus acidophilus NCFM	*2 Lactobacillus brevis ATCC 367 Site: position = -19 score = 4.9567 sequence = AAGGAAGGGAGTCTTAAAAT Gene: LVIS_0225: Manganese transport protein MntH Site: position = -213 score = 4.34354 sequence = ATTTTTGGTAAGCCAAAAAT Gene: LVIS_0331: Manganese transport protein MntH	* Lactobacillus casei ATCC 334 Site: position = -71 score = 6.35621 sequence = AAGTTAGGGAGACCTAAAAG Gene: LSEI_2413: Manganese transport protein MntH	Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365	* Lactobacillus fermentum IFO 3956 Site: position = -91 score = 4.82986 sequence = TTTTTATGCTAACCTAACAA Gene: LAF_1828: Manganese transport protein MntH	Lactobacillus helveticus DPC 4571	Lactobacillus johnsonii NCC 533 Gene: LJ1144: Manganese transport protein MntH	* Lactobacillus plantarum WCFS1 Site: position = -98 score = 5.29665 sequence = TTTGTAGGCATACCTAAAAA Gene: lp_2992: Manganese transport protein MntH	* Lactobacillus reuteri JCM 1112 Site: position = -89 score = 4.82387 sequence = TTTTTATGTTACCCTAACAA Gene: LAR_1743: Manganese transport protein MntH	* Lactobacillus rhamnosus GG Site: position = -72 score = 6.35621 sequence = AAGTTAGGGAGACCTAAAAG Gene: LGG_02411: Manganese transport protein MntH	*2 Lactobacillus sakei subsp. sakei 23K Site: position = 7 score = 5.53341 sequence = AAGTTAAGGGACCCAAAAAG Gene: LSA0246: Manganese transport protein MntH Site: position = -77 score = 5.83553 sequence = AAGTTAGGGCATCCTAAAAT Gene: LSA1699: Manganese transport protein MntH	* Lactobacillus salivarius subsp. salivarius UCC118 Site: position = -87 score = 5.21946 sequence = AGTTAAGGTAGACCTAAAAA Gene: LSL_0904: Manganese transport protein MntH	Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293	2 Oenococcus oeni PSU-1 Gene: OEOE_1795: Manganese transport protein MntH Gene: OEOE_0246: Manganese transport protein MntH	2 Pediococcus pentosaceus ATCC 25745 Gene: PEPE_0045: Manganese transport protein MntH Gene: PEPE_1701: Manganese transport protein MntH	Manganese transport protein MntH
CRON 2.
mntC	Lactobacillus acidophilus NCFM	Lactobacillus brevis ATCC 367	* Lactobacillus casei ATCC 334 Site: position = -32 score = 5.74106 sequence = GAATTAGGTCACCCTAAAAA Gene: LSEI_2423: Manganese ABC transporter, permease protein	Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365	Lactobacillus fermentum IFO 3956	Lactobacillus helveticus DPC 4571	Lactobacillus johnsonii NCC 533	* Lactobacillus plantarum WCFS1 Site: position = -82 score = 5.19094 sequence = AAGTTAACTGCACCTAACAA Gene: lp_1095: Manganese ABC transporter, permease protein	Lactobacillus reuteri JCM 1112	* Lactobacillus rhamnosus GG Site: position = -31 score = 5.62302 sequence = GAATTAGGTCACCCTAAAAT Gene: LGG_02421: Manganese ABC transporter, permease protein	* Lactobacillus sakei subsp. sakei 23K Site: position = -34 score = 6.28858 sequence = AAGTTAGGTATACCTAAAAG Gene: LSA0180: Manganese ABC transporter, permease protein	Lactobacillus salivarius subsp. salivarius UCC118	Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 Gene: LEUM_0951: Manganese ABC transporter, permease protein	Oenococcus oeni PSU-1	Pediococcus pentosaceus ATCC 25745	Manganese ABC transporter, permease protein
mntB	Lactobacillus acidophilus NCFM	Lactobacillus brevis ATCC 367	Lactobacillus casei ATCC 334 Gene: LSEI_2422: Manganese ABC transporter, ATP-binding protein	Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365	Lactobacillus fermentum IFO 3956	Lactobacillus helveticus DPC 4571	Lactobacillus johnsonii NCC 533	Lactobacillus plantarum WCFS1 Gene: lp_1096: Manganese ABC transporter, ATP-binding protein	Lactobacillus reuteri JCM 1112	Lactobacillus rhamnosus GG Gene: LGG_02420: Manganese ABC transporter, ATP-binding protein	Lactobacillus sakei subsp. sakei 23K Gene: LSA0181: Manganese ABC transporter, ATP-binding protein	Lactobacillus salivarius subsp. salivarius UCC118	Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 Gene: LEUM_0952: Manganese ABC transporter, ATP-binding protein	Oenococcus oeni PSU-1	Pediococcus pentosaceus ATCC 25745	Manganese ABC transporter, ATP-binding protein
mntA	Lactobacillus acidophilus NCFM	Lactobacillus brevis ATCC 367	Lactobacillus casei ATCC 334 Gene: LSEI_2421: Manganese ABC transporter, substrate-binding protein	Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365	Lactobacillus fermentum IFO 3956	Lactobacillus helveticus DPC 4571	Lactobacillus johnsonii NCC 533	Lactobacillus plantarum WCFS1 Gene: lp_1097: Manganese ABC transporter, substrate-binding protein	Lactobacillus reuteri JCM 1112	Lactobacillus rhamnosus GG Gene: LGG_02419: Manganese ABC transporter, substrate-binding protein	Lactobacillus sakei subsp. sakei 23K Gene: LSA0182: Manganese ABC transporter, substrate-binding protein	Lactobacillus salivarius subsp. salivarius UCC118	Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 Gene: LEUM_0953: Manganese ABC transporter, substrate-binding protein	Oenococcus oeni PSU-1	Pediococcus pentosaceus ATCC 25745	Manganese ABC transporter, substrate-binding protein

Export

	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD