Regulog LacR - Lactobacillaceae
| Regulator type: | Transcription factor |
| Regulator family: | DeoR |
| Regulation mode: | repressor |
| Biological process: | Lactose utilization |
| Effector: | D-galactose-6-phosphate |
| Phylum: | Firmicutes |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Lactobacillaceae
- By TF family - DeoR
- By effector - D-galactose-6-phosphate
- By pathway - Lactose utilization
| Genome | Genes | Operons |
|---|---|---|
| Lactobacillus acidophilus NCFM | ||
| Lactobacillus brevis ATCC 367 | ||
| Lactobacillus casei ATCC 334 | 6 | 1 |
| Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 | ||
| Lactobacillus fermentum IFO 3956 | ||
| Lactobacillus helveticus DPC 4571 | ||
| Lactobacillus johnsonii NCC 533 | ||
| Lactobacillus plantarum WCFS1 | ||
| Lactobacillus reuteri JCM 1112 | ||
| Lactobacillus rhamnosus GG | 6 | 1 |
| Lactobacillus sakei subsp. sakei 23K | ||
| Lactobacillus salivarius subsp. salivarius UCC118 | ||
| Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 | ||
| Oenococcus oeni PSU-1 | ||
| Pediococcus pentosaceus ATCC 25745 |
| Genes | Function | |||||||||||||||
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| CRON 1. | ||||||||||||||||
| lacR |
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Lactobacillus casei ATCC 334 Site: position = -46 score = 9.04965 sequence = AAGAAACAA-(1)-ATCAAACAA Gene: LSEI_0681: Lactose utilization transcriptional regulator LacR, DeoR family |
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Lactobacillus rhamnosus GG Site: position = -48 score = 9.04965 sequence = AAGAAACAA-(1)-ATCAAACAA Gene: LGG_00668: Lactose utilization transcriptional regulator LacR, DeoR family |
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Lactose utilization transcriptional regulator LacR, DeoR family |
| lacA |
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Gene: LSEI_0680: Galactose-6-phosphate isomerase, LacA subunit (EC 5.3.1.26) |
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Gene: LGG_00667: Galactose-6-phosphate isomerase, LacA subunit (EC 5.3.1.26) |
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Galactose-6-phosphate isomerase, LacA subunit (EC 5.3.1.26) |
| lacB |
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Gene: LSEI_0679: Galactose-6-phosphate isomerase, LacB subunit (EC 5.3.1.26) |
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Gene: LGG_00666: Galactose-6-phosphate isomerase, LacB subunit (EC 5.3.1.26) |
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Galactose-6-phosphate isomerase, LacB subunit (EC 5.3.1.26) |
| lacD |
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Gene: LSEI_0678: Tagatose 1,6-diphosphate aldolase (EC 4.1.2.40) |
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Gene: LGG_00665: Tagatose 1,6-diphosphate aldolase (EC 4.1.2.40) |
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Tagatose 1,6-diphosphate aldolase (EC 4.1.2.40) |
| lacC |
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Gene: LSEI_0677: Tagatose-6-phosphate kinase (EC 2.7.1.144) |
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Gene: LGG_00664: Tagatose-6-phosphate kinase (EC 2.7.1.144) |
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Tagatose-6-phosphate kinase (EC 2.7.1.144) |
| LSEI_0676 |
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Gene: LSEI_0676: Conserved hypothetical protein |
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Gene: LGG_00663: Conserved hypothetical protein |
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Conserved hypothetical protein |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |