Regulog CcpA - Lactobacillaceae
| Regulator type: | Transcription factor |
| Regulator family: | LacI |
| Regulation mode: | |
| Biological process: | Carbon catabolism |
| Effector: | HPr, phosphocarrier protein; Fructose-1,6-bisphosphate |
| Phylum: | Firmicutes |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Lactobacillaceae
- By trascription factor - CcpA
- By TF family - LacI
- By effector - HPr, phosphocarrier protein
- By effector - Fructose-1,6-bisphosphate
- By pathway - Carbon catabolism
| Genome | Genes | Operons |
|---|---|---|
| Lactobacillus acidophilus NCFM | 70 | 37 |
| Lactobacillus brevis ATCC 367 | 58 | 32 |
| Lactobacillus casei ATCC 334 | 69 | 31 |
| Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 | 8 | 5 |
| Lactobacillus fermentum IFO 3956 | 51 | 30 |
| Lactobacillus helveticus DPC 4571 | 29 | 17 |
| Lactobacillus johnsonii NCC 533 | 57 | 35 |
| Lactobacillus plantarum WCFS1 | 126 | 56 |
| Lactobacillus reuteri JCM 1112 | 53 | 29 |
| Lactobacillus rhamnosus GG | 68 | 29 |
| Lactobacillus sakei subsp. sakei 23K | 62 | 29 |
| Lactobacillus salivarius subsp. salivarius UCC118 | 81 | 33 |
| Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 | 77 | 32 |
| Oenococcus oeni PSU-1 | 36 | 22 |
| Pediococcus pentosaceus ATCC 25745 | 83 | 42 |
| Genes | Function | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | ||||||||||||||||
| arcD |
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Lactobacillus brevis ATCC 367 Site: position = -40 score = 4.50742 sequence = ATCAAACCGCTTTCAT Gene: LVIS_2031: Arginine/ornithine antiporter |
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Lactobacillus fermentum IFO 3956 Site: position = -36 score = 4.35424 sequence = ATGTAAGCATATTCAT Gene: LAF_1176: Arginine/ornithine antiporter |
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Lactobacillus reuteri JCM 1112 Site: position = -65 score = 4.63647 sequence = TTGAAGCCGCTTTCAA Gene: LAR_1455: Arginine/ornithine antiporter |
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Arginine/ornithine antiporter |
| arcT |
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Gene: LVIS_2032: Xaa-His dipeptidase (EC 3.4.13.3) |
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Gene: LAR_1454: Xaa-His dipeptidase (EC 3.4.13.3) |
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Xaa-His dipeptidase (EC 3.4.13.3) |
| CRON 2. | ||||||||||||||||
| nplT |
Gene: LBA1871: Neopullulanase (EC 3.2.1.135) |
Gene: LVIS_2180: Neopullulanase (EC 3.2.1.135) |
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Lactobacillus casei ATCC 334 Site: position = -80 score = 4.43066 sequence = TTGATAACGGTAACAA Gene: LSEI_0980: Neopullulanase (EC 3.2.1.135) |
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Lactobacillus fermentum IFO 3956 Site: position = -96 score = 4.59662 sequence = GTGAAAACGGTTACTT Gene: LAF_0739: Neopullulanase (EC 3.2.1.135) |
Gene: lhv_2001: Neopullulanase (EC 3.2.1.135) |
Gene: LJ0212: Neopullulanase (EC 3.2.1.135) |
*3
Lactobacillus plantarum WCFS1 Site: position = -73 score = 4.23523 sequence = TTGTAAGCGGTACCTT Gene: lp_0193: Neopullulanase (EC 3.2.1.135) Site: position = -73 score = 4.48813 sequence = ATGTAAGGGGTTACAT Gene: lp_3627: Neopullulanase (EC 3.2.1.135) Site: position = -32 score = 4.90617 sequence = ATGTAATCGTTTACAT Gene: lp_2757: Neopullulanase (EC 3.2.1.135) |
*2
Lactobacillus reuteri JCM 1112 Site: position = -130 score = 4.90617 sequence = ATGTAATCGTTTACAT Gene: LAR_0078: Neopullulanase (EC 3.2.1.135) Gene: LAR_1507: Neopullulanase (EC 3.2.1.135) |
Gene: LGG_00944: Neopullulanase (EC 3.2.1.135) |
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Gene: LSL_1295: Neopullulanase (EC 3.2.1.135) |
*2
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 Gene: LEUM_0899: Neopullulanase (EC 3.2.1.135) Site: position = -92 score = 4.25012 sequence = AAGTAAACGTTTACTG Site: position = -60 score = 4.16421 sequence = TTGTAAACGTTTACGC Gene: LEUM_0828: Neopullulanase (EC 3.2.1.135) |
Gene: OEOE_0040: Neopullulanase (EC 3.2.1.135) |
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Neopullulanase (EC 3.2.1.135) |
| melB2 |
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Gene: LAF_0738: Sugar transport protein |
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Gene: lp_3626: Sugar transport protein |
Gene: LAR_0079: Sugar transport protein |
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Sugar transport protein |
| malR3 |
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Lactobacillus brevis ATCC 367 Site: position = -172 score = 4.84414 sequence = AAGTAACCGTTTTCAA Gene: LVIS_2178: Predicted maltose/maltodextrin utilization transcriptional regulator MalR3, LacI family |
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Lactobacillus fermentum IFO 3956 Site: position = -77 score = 4.34032 sequence = AAGTAACCGTTTTCAC Gene: LAF_0740: Predicted maltose/maltodextrin utilization transcriptional regulator MalR3, LacI family |
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*2
Lactobacillus plantarum WCFS1 Site: position = -113 score = 4.40825 sequence = ACGTAAACGTTTACAA Site: position = -81 score = 4.37079 sequence = AAGTAAACGTTTACAC Gene: lp_3531: Predicted maltose/maltodextrin utilization transcriptional regulator MalR3, LacI family Gene: lp_3625: Predicted maltose/maltodextrin utilization transcriptional regulator MalR3, LacI family |
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Lactobacillus reuteri JCM 1112 Site: position = -74 score = 5.32202 sequence = TTGAAAACGTTTACAA Gene: LAR_0083: Predicted maltose/maltodextrin utilization transcriptional regulator MalR3, LacI family |
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Gene: LEUM_0829: Predicted maltose/maltodextrin utilization transcriptional regulator MalR3, LacI family |
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Oenococcus oeni PSU-1 Site: position = -147 score = 4.87461 sequence = AAGTAAACGTTTACAA Site: position = -112 score = 4.44921 sequence = CAGTAAACGTTTACAA Gene: OEOE_0042: Predicted maltose/maltodextrin utilization transcriptional regulator MalR3, LacI family |
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Predicted maltose/maltodextrin utilization transcriptional regulator MalR3, LacI family |
| malT2 |
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Lactobacillus brevis ATCC 367 Site: position = -38 score = 4.91304 sequence = TTGAAAACGGTTACTT Gene: LVIS_2179: Predicted maltose/maltodextrin permease |
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Lactobacillus plantarum WCFS1 Site: position = -72 score = 4.66803 sequence = TTGTAAACGTTTACGT Site: position = -104 score = 4.61616 sequence = GTGTAAACGTTTACTT Gene: lp_3533: Predicted maltose/maltodextrin permease |
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Lactobacillus reuteri JCM 1112 Site: position = -52 score = 4.62005 sequence = ATGTAAGCGTAATCAT Site: position = -89 score = 4.18149 sequence = GTGCAAGCGGTTGCAA Gene: LAR_1508: Predicted maltose/maltodextrin permease |
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*2
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 Gene: LEUM_0827: Predicted maltose/maltodextrin permease Site: position = -72 score = 4.84641 sequence = ATGTAAGCGGTTACTT Gene: LEUM_0898: Predicted maltose/maltodextrin permease |
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Oenococcus oeni PSU-1 Site: position = -124 score = 4.16325 sequence = CAGTAAACGTTTACTA Site: position = -92 score = 4.59403 sequence = TTGTAAACGTTTACTG Site: position = -57 score = 4.93258 sequence = TTGTAAACGTTTACTT Gene: OEOE_0041: Predicted maltose/maltodextrin permease |
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Predicted maltose/maltodextrin permease |
| agl3 |
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Lactobacillus acidophilus NCFM Site: position = -40 score = 4.77994 sequence = TTGAAAGCGAATACAT Gene: LBA1812: Alpha-glucosidase (EC 3.2.1.20) |
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Lactobacillus johnsonii NCC 533 Site: position = -35 score = 4.77994 sequence = TTGAAAGCGAATACAA Gene: LJ0569: Alpha-glucosidase (EC 3.2.1.20) |
Gene: lp_3534: Alpha-glucosidase (EC 3.2.1.20) |
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Lactobacillus reuteri JCM 1112 Site: position = -66 score = 4.51174 sequence = ACGAAAACGTTTACAT Gene: LAR_0972: Alpha-glucosidase (EC 3.2.1.20) |
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Oligo-1,6-glucosidase (EC 3.2.1.10) |
| LSL_1296 |
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Lactobacillus salivarius subsp. salivarius UCC118 Site: position = -76 score = 4.29931 sequence = AAGGAAGCGGTAACAA Gene: LSL_1296: Hypothetical protein |
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Hypothetical protein |
| agl |
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Lactobacillus acidophilus NCFM Site: position = -49 score = 5.01023 sequence = TTGAAAACGGTTTCTT Gene: LBA1872: Oligo-1,6-glucosidase (EC 3.2.1.10) |
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Lactobacillus helveticus DPC 4571 Site: position = -34 score = 4.33711 sequence = TTGAAAACGGTTTCCC Gene: lhv_2002: Oligo-1,6-glucosidase (EC 3.2.1.10) |
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Lactobacillus johnsonii NCC 533 Site: position = -53 score = 4.98116 sequence = TTGTAAGCGCTTATAA Gene: LJ0211: Oligo-1,6-glucosidase (EC 3.2.1.10) |
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Oligo-1,6-glucosidase (EC 3.2.1.10) |
| CRON 3. | ||||||||||||||||
| msmE |
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Lactobacillus acidophilus NCFM Site: position = -53 score = 5.06325 sequence = ATGAAAGCGCTTAAAA Gene: LBA1442: Multiple sugar ABC transporter, substrate-binding protein |
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Multiple sugar ABC transporter, substrate-binding protein |
| msmF |
Gene: LBA1441: Multiple sugar ABC transporter, permease protein 2 |
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Multiple sugar ABC transporter, permease protein 2 |
| msmG |
Gene: LBA1440: Multiple sugar ABC transporter, permease protein 1 |
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Multiple sugar ABC transporter, permease protein 1 |
| CRON 4. | ||||||||||||||||
| pgm |
Gene: LBA0687: D-Ribose 1,5-phosphomutase (EC 5.4.2.7) |
Gene: LVIS_1907: Phosphomannomutase |
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Lactobacillus casei ATCC 334 Site: position = -102 score = 3.93349 sequence = TTGAGCGCGTTTTCAA Gene: LSEI_0949: Phosphoglucosamine mutase (EC 5.4.2.10) / Phosphomannomutase (EC 5.4.2.8) |
Gene: LBUL_1643: Phosphoglucomutase (EC 5.4.2.2) |
Gene: LAF_0350: Phosphoglucomutase (EC 5.4.2.2) |
Gene: lhv_0728: phosphoglucomutase |
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Lactobacillus johnsonii NCC 533 Site: position = -121 score = 4.32147 sequence = ATAAAAGCGTTTAATA Gene: LJ0862: D-Ribose 1,5-phosphomutase (EC 5.4.2.7) |
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Lactobacillus plantarum WCFS1 Site: position = -40 score = 4.42629 sequence = TTGTAAGCACTAACAA Gene: lp_0764: Phosphoglucomutase (EC 5.4.2.2) |
Gene: LAR_0369: Phosphoglucomutase (EC 5.4.2.2) |
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Lactobacillus rhamnosus GG Site: position = -100 score = 3.93349 sequence = TTGAGCGCGTTTTCAA Gene: LGG_00921: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I, II & III |
Gene: LSA0521: Phosphoglucomutase |
Gene: LSL_1176: Phosphoglucomutase |
Gene: LEUM_0606: Phosphoglucomutase (EC 5.4.2.2) |
Gene: OEOE_0367: Phosphomannomutase |
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Pediococcus pentosaceus ATCC 25745 Site: position = -77 score = 4.07597 sequence = AAAAAAACGCTTTCTG Gene: PEPE_0446: Phosphoglucomutase (EC 5.4.2.2) |
D-Ribose 1,5-phosphomutase (EC 5.4.2.7) |
| CRON 5. | ||||||||||||||||
| coaA |
Gene: LBA1669: Pantothenate kinase (EC 2.7.1.33) |
Gene: LVIS_1761: Pantothenate kinase (EC 2.7.1.33) |
Gene: LSEI_1980: Pantothenate kinase (EC 2.7.1.33) |
Gene: LBUL_1779: Pantothenate kinase (EC 2.7.1.33) |
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Lactobacillus fermentum IFO 3956 Site: position = -35 score = 3.96707 sequence = ATGTAAGGGCTATCCA Gene: LAF_1646: Pantothenate kinase (EC 2.7.1.33) |
Gene: lhv_1766: Pantothenate kinase (EC 2.7.1.33) |
Gene: LJ0619: Pantothenate kinase (EC 2.7.1.33) |
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Lactobacillus plantarum WCFS1 Site: position = -61 score = 4.21014 sequence = TTGATAAGGGTTTCAT Gene: lp_0913: Pantothenate kinase (EC 2.7.1.33) |
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Lactobacillus reuteri JCM 1112 Site: position = -44 score = 4.57696 sequence = GAGTAACCGTTTTCAT Gene: LAR_1512: Pantothenate kinase (EC 2.7.1.33) |
Gene: LGG_01969: Pantothenate kinase (EC 2.7.1.33) |
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Lactobacillus sakei subsp. sakei 23K Site: position = -44 score = 3.82965 sequence = ATGTAACCGTTTAGCA Gene: LSA0138: Pantothenate kinase (EC 2.7.1.33) |
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Lactobacillus salivarius subsp. salivarius UCC118 Site: position = -75 score = 4.15071 sequence = TTGAAAGCGTAATATT Gene: LSL_1538: Pantothenate kinase (EC 2.7.1.33) |
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Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 Site: position = -107 score = 4.08552 sequence = TTGTATACTGTTTCAT Gene: LEUM_1881: Pantothenate kinase (EC 2.7.1.33) |
Gene: OEOE_1603: Pantothenate kinase (EC 2.7.1.33) |
Gene: PEPE_0407: Pantothenate kinase (EC 2.7.1.33) |
Pantothenate kinase (EC 2.7.1.33) |
| guaA |
Gene: LBA0245: GMP synthase (EC 6.3.5.2) |
Gene: LVIS_1759: GMP synthase (EC 6.3.5.2) |
Gene: LSEI_1979: GMP synthase (EC 6.3.5.2) |
Gene: LBUL_0252: GMP synthase (EC 6.3.5.2) |
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Gene: lhv_0258: GMP synthase (EC 6.3.5.2) |
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Lactobacillus johnsonii NCC 533 Site: position = -120 score = 4.0418 sequence = ATTAAAGCGCTATTTT Gene: LJ0229: GMP synthase (EC 6.3.5.2) |
Gene: lp_0914: GMP synthase (EC 6.3.5.2) |
Gene: LAR_1510: GMP synthase (EC 6.3.5.2) |
Gene: LGG_01968: GMP synthase (EC 6.3.5.2) |
Gene: LSA0139: GMP synthase (EC 6.3.5.2) |
Gene: LSL_1537: GMP synthase (EC 6.3.5.2) |
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Gene: OEOE_1123: GMP synthase (EC 6.3.5.2) |
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Pediococcus pentosaceus ATCC 25745 Site: position = -103 score = 4.26935 sequence = TTGATAGCCTTTTCAT Gene: PEPE_0412: GMP synthase (EC 6.3.5.2) |
GMP synthase (EC 6.3.5.2) |
| CRON 6. | ||||||||||||||||
| msmX |
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Lactobacillus plantarum WCFS1 Site: position = -187 score = 4.2696 sequence = TAATAAACGTTTTAAT Site: position = -49 score = 4.38805 sequence = GAGAAAGCGGTTACTA Gene: lp_3644: Multiple sugar ABC transporter, permease protein 2 |
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Multiple sugar ABC transporter, permease protein 2 |
| msmY |
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Gene: lp_3643: Multiple sugar ABC transporter, permease protein 1 |
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Multiple sugar ABC transporter, permease protein 1 |
| msmZ |
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Gene: lp_3642: Multiple sugar ABC transporter, substrate-binding protein |
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Multiple sugar ABC transporter, substrate-binding protein |
| CRON 7. | ||||||||||||||||
| ccpA |
*
Lactobacillus acidophilus NCFM Site: position = -75 score = 4.37881 sequence = CTGTAAACGTTTGCAA Gene: LBA0431: Carbon catabolism global transcriptional regulator CcpA, LacI family |
*
Lactobacillus brevis ATCC 367 Site: position = -49 score = 4.0918 sequence = TTGAAAACGGATGAAA Site: position = -107 score = 4.65818 sequence = TCGAAAACGTTTTCAA Gene: LVIS_1203: Carbon catabolism global transcriptional regulator CcpA, LacI family |
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Lactobacillus casei ATCC 334 Site: position = -94 score = 3.97919 sequence = AGTAAAACGCTTGCAT Gene: LSEI_0809: Carbon catabolism global transcriptional regulator CcpA, LacI family |
Gene: LBUL_1473: Carbon catabolism global transcriptional regulator CcpA, LacI family |
Gene: LAF_0539: Carbon catabolism global transcriptional regulator CcpA, LacI family |
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Lactobacillus helveticus DPC 4571 Site: position = -76 score = 4.30039 sequence = ATGTAAACGTTTGCAC Gene: lhv_0457: Carbon catabolism global transcriptional regulator CcpA, LacI family |
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Lactobacillus johnsonii NCC 533 Site: position = -74 score = 3.96941 sequence = TCGTAAACGGTTGCAA Gene: LJ0491: Carbon catabolism global transcriptional regulator CcpA, LacI family |
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Lactobacillus plantarum WCFS1 Site: position = -121 score = 5.23388 sequence = ATGAAAGCGATTTCAA Site: position = -51 score = 4.04255 sequence = ATGAAAACGGATGAAA Gene: lp_2256: Carbon catabolism global transcriptional regulator CcpA, LacI family |
Gene: LAR_0536: Carbon catabolism global transcriptional regulator CcpA, LacI family |
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Lactobacillus rhamnosus GG Site: position = -95 score = 3.97919 sequence = AGTAAAACGCTTGCAT Gene: LGG_00793: Carbon catabolism global transcriptional regulator CcpA, LacI family |
Gene: LSA0415: Carbon catabolism global transcriptional regulator CcpA, LacI family |
Gene: LSL_0420: Carbon catabolism global transcriptional regulator CcpA, LacI family |
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Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 Site: position = -114 score = 4.35697 sequence = ATGAAAACACTTATAA Site: position = -92 score = 4.93957 sequence = TTGTAAGCGTTTGCAA Gene: LEUM_0544: Carbon catabolism global transcriptional regulator CcpA, LacI family |
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Oenococcus oeni PSU-1 Site: position = -59 score = 4.58161 sequence = ATGTAATCGCTTGCAT Gene: OEOE_0684: Carbon catabolism global transcriptional regulator CcpA, LacI family |
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Pediococcus pentosaceus ATCC 25745 Site: position = -69 score = 4.57139 sequence = TTGATAACGTATTCAT Gene: PEPE_1250: Carbon catabolism global transcriptional regulator CcpA, LacI family |
Carbon catabolism global transcriptional regulator CcpA, LacI family |
| CRON 8. | ||||||||||||||||
| glpF2 |
Gene: LBA1595: Glycerol uptake facilitator protein |
Gene: LVIS_1853: Glycerol uptake facilitator protein |
Gene: LSEI_0801: Glycerol uptake facilitator protein |
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Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 Site: position = -132 score = 4.67524 sequence = ATAAAAGCGCATTCAT Gene: LBUL_0058: Glycerol uptake facilitator protein |
Gene: LAF_1730: Glycerol uptake facilitator protein |
Gene: lhv_1671: Glycerol uptake facilitator protein |
Gene: LJ0700: Glycerol uptake facilitator protein |
*3
Lactobacillus plantarum WCFS1 Gene: lp_1175: Glycerol uptake facilitator protein Site: position = -82 score = 4.58589 sequence = AATAAAGCGTTTACAT Site: position = -104 score = 4.29026 sequence = TAGAAACCGCTTATTT Gene: lp_3436: Glycerol uptake facilitator protein Gene: lp_0108: Glycerol uptake facilitator protein |
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Gene: LGG_00784: Glycerol uptake facilitator protein |
*2
Lactobacillus sakei subsp. sakei 23K Gene: LSA0788: Glycerol uptake facilitator protein Site: position = -95 score = 4.10088 sequence = ATAAAAGGGCTTTAAT Gene: LSA1170: Glycerol uptake facilitator protein |
Gene: LSL_0466: Glycerol uptake facilitator protein |
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Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 Site: position = -292 score = 3.87817 sequence = TTTCAAGCGCTTCAAT Gene: LEUM_1392: Glycerol uptake facilitator protein |
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Oenococcus oeni PSU-1 Site: position = -82 score = 4.49979 sequence = AATAAAACGTTTACAT Site: position = -104 score = 4.29026 sequence = TAGAAACCGCTTATTT Gene: OEOE_0349: Glycerol uptake facilitator protein |
2
Pediococcus pentosaceus ATCC 25745 Gene: PEPE_1691: Glycerol uptake facilitator protein Gene: PEPE_1249: Glycerol uptake facilitator protein |
Glycerol uptake facilitator protein |
| CRON 9. | ||||||||||||||||
| LEUM_2039 |
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Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 Site: position = 29 score = 4.41531 sequence = GAGAAAACGCTTAAAA Gene: LEUM_2039: Predicted transcriptional regulator of FeS culster biosynthesis, XRE family |
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Predicted transcriptional regulator of FeS culster biosynthesis, XRE family |
| sufC |
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Gene: LSEI_1180: Iron-sulfur cluster assembly ATPase protein |
Gene: LBUL_1693: Iron-sulfur cluster assembly ATPase protein |
Gene: LAF_1096: Iron-sulfur cluster assembly ATPase protein |
Gene: lhv_0621: Iron-sulfur cluster assembly ATPase protein |
Gene: LJ1138: Iron-sulfur cluster assembly ATPase protein |
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Lactobacillus plantarum WCFS1 Site: position = -138 score = 4.28195 sequence = ATGAAAACGGTTATAC Site: position = -186 score = 4.48836 sequence = ATGAAAGGGCTTTTAT Gene: lp_1468: Iron-sulfur cluster assembly ATPase protein |
Gene: LAR_0837: Iron-sulfur cluster assembly ATPase protein |
Gene: LGG_01199: Iron-sulfur cluster assembly ATPase protein |
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Lactobacillus sakei subsp. sakei 23K Site: position = -74 score = 3.92103 sequence = TGAAAAGCGTTCTCAT Gene: LSA1113: Iron-sulfur cluster assembly ATPase protein |
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Lactobacillus salivarius subsp. salivarius UCC118 Site: position = -181 score = 4.20682 sequence = ATGTAAGCGTTATTCT Gene: LSL_1881: Iron-sulfur cluster assembly ATPase protein |
Gene: LEUM_2038: Iron-sulfur cluster assembly ATPase protein |
Gene: OEOE_1114: Iron-sulfur cluster assembly ATPase protein |
Gene: PEPE_0486: Iron-sulfur cluster assembly ATPase protein |
Iron-sulfur cluster assembly ATPase protein |
| sufD |
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Gene: LSEI_1181: Iron-sulfur cluster assembly protein |
Gene: LBUL_1692: Iron-sulfur cluster assembly protein |
Gene: LAF_1095: Iron-sulfur cluster assembly protein |
Gene: lhv_0622: Iron-sulfur cluster assembly protein |
Gene: LJ1139: Iron-sulfur cluster assembly protein |
Gene: lp_1469: Iron-sulfur cluster assembly protein |
Gene: LAR_0838: Iron-sulfur cluster assembly protein |
Gene: LGG_01200: Iron-sulfur cluster assembly protein |
Gene: LSA1112: Iron-sulfur cluster assembly protein |
Gene: LSL_1880: Iron-sulfur cluster assembly protein |
Gene: LEUM_2037: Iron-sulfur cluster assembly protein |
Gene: OEOE_1113: Iron-sulfur cluster assembly protein |
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Iron-sulfur cluster assembly protein |
| sufS |
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Gene: LSEI_1182: Cysteine desulfurase (EC 2.8.1.7), SufS subfamily |
Gene: LBUL_1691: Cysteine desulfurase (EC 2.8.1.7), SufS subfamily |
Gene: LAF_1094: Cysteine desulfurase (EC 2.8.1.7), SufS subfamily |
Gene: lhv_0623: Cysteine desulfurase (EC 2.8.1.7), SufS subfamily |
Gene: LJ1140: Cysteine desulfurase (EC 2.8.1.7), SufS subfamily |
Gene: lp_1470: Cysteine desulfurase (EC 2.8.1.7), SufS subfamily |
Gene: LAR_0839: Cysteine desulfurase (EC 2.8.1.7), SufS subfamily |
Gene: LGG_01201: Cysteine desulfurase (EC 2.8.1.7), SufS subfamily |
Gene: LSA1111: Cysteine desulfurase (EC 2.8.1.7), SufS subfamily |
Gene: LSL_1879: Cysteine desulfurase (EC 2.8.1.7), SufS subfamily |
Gene: LEUM_2036: Cysteine desulfurase (EC 2.8.1.7), SufS subfamily |
Gene: OEOE_1112: Cysteine desulfurase (EC 2.8.1.7), SufS subfamily |
Gene: PEPE_0488: Cysteine desulfurase (EC 2.8.1.7), SufS subfamily |
Cysteine desulfurase (EC 2.8.1.7), SufS subfamily |
| sufA |
|
|
Gene: LSEI_1183: Fe-S cluster formation protein, NifU-like |
Gene: LBUL_1690: Fe-S cluster formation protein, NifU-like |
Gene: LAF_1093: Fe-S cluster formation protein, NifU-like |
Gene: lhv_0624: Fe-S cluster formation protein, NifU-like |
Gene: LJ1141: Fe-S cluster formation protein, NifU-like |
Gene: lp_1471: Fe-S cluster formation protein, NifU-like |
Gene: LAR_0840: Fe-S cluster formation protein, NifU-like |
Gene: LGG_01202: Fe-S cluster formation protein, NifU-like |
Gene: LSA1110: Fe-S cluster formation protein, NifU-like |
Gene: LSL_1878: Fe-S cluster formation protein, NifU-like |
Gene: LEUM_2035: Fe-S cluster formation protein, NifU-like |
Gene: OEOE_1110: Fe-S cluster formation protein, NifU-like |
Gene: PEPE_0489: Fe-S cluster formation protein, NifU-like |
Fe-S cluster formation protein, NifU-like |
| sufB |
|
|
Gene: LSEI_1184: Fe-S cluster assembly ABC-type transport system, permease component |
Gene: LBUL_1689: Fe-S cluster assembly ABC-type transport system, permease component |
Gene: LAF_1092: Fe-S cluster assembly ABC-type transport system, permease component |
Gene: lhv_0625: Fe-S cluster assembly ABC-type transport system, permease component |
Gene: LJ1142: Fe-S cluster assembly ABC-type transport system, permease component |
Gene: lp_1472: Fe-S cluster assembly ABC-type transport system, permease component |
Gene: LAR_0841: Fe-S cluster assembly ABC-type transport system, permease component |
Gene: LGG_01203: Fe-S cluster assembly ABC-type transport system, permease component |
Gene: LSA1109: Fe-S cluster assembly ABC-type transport system, permease component |
Gene: LSL_1877: Fe-S cluster assembly ABC-type transport system, permease component |
Gene: LEUM_2034: Fe-S cluster assembly ABC-type transport system, permease component |
Gene: OEOE_1111: Fe-S cluster assembly ABC-type transport system, permease component |
2
Pediococcus pentosaceus ATCC 25745 Gene: PEPE_0487: Fe-S cluster assembly ABC-type transport system, permease component Gene: PEPE_0490: Fe-S cluster assembly ABC-type transport system, permease component |
Fe-S cluster assembly ABC-type transport system, permease component |
| CRON 10. | ||||||||||||||||
| glpK |
|
*
Lactobacillus brevis ATCC 367 Site: position = -46 score = 4.30268 sequence = TTGGAACCGGTTTCGT Gene: LVIS_0238: Glycerol kinase (EC 2.7.1.30) |
*
Lactobacillus casei ATCC 334 Site: position = -51 score = 4.66971 sequence = CTGGAAACGCTTTCAT Gene: LSEI_0662: Glycerol kinase (EC 2.7.1.30) |
|
|
|
|
*2
Lactobacillus plantarum WCFS1 Site: position = -46 score = 5.01425 sequence = ATGATAGCGTTTTCAT Gene: lp_0370: Glycerol kinase (EC 2.7.1.30) Gene: lp_0834: Glycerol kinase (EC 2.7.1.30) |
|
*
Lactobacillus rhamnosus GG Site: position = -51 score = 5.12454 sequence = TAGAAAACGTTTTCAT Gene: LGG_00644: Glycerol kinase (EC 2.7.1.30) |
*
Lactobacillus sakei subsp. sakei 23K Site: position = -43 score = 4.3047 sequence = AAGGAAACGTTTTCCA Gene: LSA0649: Glycerol kinase (EC 2.7.1.30) |
*
Lactobacillus salivarius subsp. salivarius UCC118 Site: position = -149 score = 4.3754 sequence = GAATAAGCGTTTTCAT Site: position = -43 score = 4.78934 sequence = AAGAAAACGTTTTCTT Gene: LSL_0110: Glycerol kinase (EC 2.7.1.30) |
|
|
*
Pediococcus pentosaceus ATCC 25745 Site: position = -51 score = 4.96519 sequence = TAGAAAGCGCTTTCTT Site: position = -84 score = 4.15963 sequence = TTAAAAACGATTTATA Gene: PEPE_1623: Glycerol kinase (EC 2.7.1.30) |
Glycerol kinase (EC 2.7.1.30) |
| glpD |
|
|
Gene: LSEI_0661: Alpha-glycerophosphate oxidase (EC 1.1.3.21) |
|
|
|
|
Gene: lp_0371: Alpha-glycerophosphate oxidase (EC 1.1.3.21) |
|
Gene: LGG_00643: Alpha-glycerophosphate oxidase (EC 1.1.3.21) |
Gene: LSA0650: Alpha-glycerophosphate oxidase (EC 1.1.3.21) |
Gene: LSL_0111: Alpha-glycerophosphate oxidase (EC 1.1.3.21) |
|
|
Gene: PEPE_1624: Alpha-glycerophosphate oxidase (EC 1.1.3.21) |
Alpha-glycerophosphate oxidase (EC 1.1.3.21) |
| glpF |
|
|
Gene: LSEI_0660: Glycerol uptake facilitator protein |
|
|
|
|
Gene: lp_0372: Glycerol uptake facilitator protein |
|
Gene: LGG_00642: Glycerol uptake facilitator protein |
Gene: LSA0651: Glycerol uptake facilitator protein |
Gene: LSL_0112: Glycerol uptake facilitator protein |
|
|
Gene: PEPE_1625: Glycerol uptake facilitator protein |
Glycerol uptake facilitator protein |
| CRON 11. | ||||||||||||||||
| licT |
*2
Lactobacillus acidophilus NCFM Site: position = -131 score = 5.12954 sequence = ATGAAAGCGTTATCAT Gene: LBA1708: Beta-glucoside bgl operon transcriptional antiterminator, BglG family Site: position = -163 score = 4.75076 sequence = TTGACACCGCTTTCAA Site: position = -196 score = 4.34857 sequence = TTTAAAACATTTTCAT Gene: LBA0724: Beta-glucoside bgl operon transcriptional antiterminator, BglG family |
|
|
|
|
|
*2
Lactobacillus johnsonii NCC 533 Site: position = -126 score = 4.6127 sequence = AAGAAAGCGATATCAT Gene: LJ0542: Beta-glucoside bgl operon transcriptional antiterminator, BglG family Site: position = -141 score = 4.70258 sequence = ATGTAAGCGCTATTAT Gene: LJ0623: Beta-glucoside bgl operon transcriptional antiterminator, BglG family |
*2
Lactobacillus plantarum WCFS1 Site: position = -147 score = 4.5221 sequence = GAGAAAACGCTATCAT Gene: lp_0904: Beta-glucoside bgl operon transcriptional antiterminator, BglG family Site: position = -160 score = 4.65357 sequence = TTGACACCGCTTACAA Gene: lp_3529: Beta-glucoside bgl operon transcriptional antiterminator, BglG family |
|
|
|
|
|
|
|
Beta-glucoside bgl operon transcriptional antiterminator, BglG family |
| bglP |
Gene: LBA1707: Beta-glucoside-specific PTS system, IIBCA component (EC 2.7.1.69) |
|
|
|
|
|
Gene: LJ0543: Beta-glucoside-specific PTS system, IIBCA component (EC 2.7.1.69) |
Gene: lp_0905: Beta-glucoside-specific PTS system, IIBCA component (EC 2.7.1.69) |
|
|
|
|
|
|
|
Beta-glucoside-specific PTS system, IIBCA component (EC 2.7.1.69) |
| bglH |
Gene: LBA1706: 6-phospho-beta-glucosidase (EC 3.2.1.86) |
|
|
|
|
|
Gene: LJ0544: 6-phospho-beta-glucosidase (EC 3.2.1.86) |
Gene: lp_0906: 6-phospho-beta-glucosidase (EC 3.2.1.86) |
|
|
|
|
|
|
|
6-phospho-beta-glucosidase (EC 3.2.1.86) |
| CRON 12. | ||||||||||||||||
| glgB |
*
Lactobacillus acidophilus NCFM Site: position = -55 score = 4.30462 sequence = AAGTAAGCGCTTTCCG Gene: LBA0680: 1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18) |
|
*
Lactobacillus casei ATCC 334 Site: position = -208 score = 4.41228 sequence = CAGTAAGCGGTTACAA Site: position = -230 score = 4.05088 sequence = TTGTAATCGCTGTTAA Gene: LSEI_2040: 1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18) |
|
|
|
|
Gene: lp_0020: 1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18) |
|
*
Lactobacillus rhamnosus GG Site: position = -197 score = 4.04941 sequence = CCGAAAGCGGTTACAA Gene: LGG_02027: 1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18) |
|
*
Lactobacillus salivarius subsp. salivarius UCC118 Site: position = -88 score = 4.04181 sequence = GTGAAAGCTATTTCTT Gene: LSL_1294: 1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18) |
|
|
|
1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18) |
| glgC |
Gene: LBA0681: Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27) |
|
Gene: LSEI_2039: Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27) |
|
|
|
|
Gene: lp_0021: Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27) |
|
Gene: LGG_02026: Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27) |
|
Gene: LSL_1293: Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27) |
|
|
|
Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27) |
| glgD |
Gene: LBA0682: Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27) |
|
Gene: LSEI_2038: Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27) |
|
|
|
|
Gene: lp_0022: Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27) |
|
Gene: LGG_02025: Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27) |
|
Gene: LSL_1292: Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27) |
|
|
|
Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27) |
| glgA |
Gene: LBA0683: Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21) |
|
Gene: LSEI_2037: Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21) |
|
|
|
|
Gene: lp_0023: Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21) |
|
Gene: LGG_02024: Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21) |
|
Gene: LSL_1291: Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21) |
|
|
|
Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21) |
| glgP |
Gene: LBA0685: Glycogen phosphorylase (EC 2.4.1.1) |
|
Gene: LSEI_2036: Glycogen phosphorylase (EC 2.4.1.1) |
|
|
|
|
Gene: lp_0024: Glycogen phosphorylase (EC 2.4.1.1) |
|
Gene: LGG_02023: Glycogen phosphorylase (EC 2.4.1.1) |
|
Gene: LSL_1290: Glycogen phosphorylase (EC 2.4.1.1) |
|
|
|
Glycogen phosphorylase (EC 2.4.1.1) |
| amy1 |
Gene: LBA0686: Neopullulanase (EC 3.2.1.135) |
|
Gene: LSEI_2035: Neopullulanase (EC 3.2.1.135) |
|
|
|
|
Gene: lp_0025: Neopullulanase (EC 3.2.1.135) |
|
Gene: LGG_02022: Neopullulanase (EC 3.2.1.135) |
|
Gene: LSL_1289: Neopullulanase (EC 3.2.1.135) |
|
|
|
Neopullulanase (EC 3.2.1.135) |
| CRON 13. | ||||||||||||||||
| xynT |
|
*
Lactobacillus brevis ATCC 367 Site: position = -202 score = 4.72568 sequence = ATGTCAACGCTTTCAT Site: position = -115 score = 4.16158 sequence = GTGTAAGCGGTTGCAG Gene: LVIS_0463: Na+/xyloside symporter |
|
|
|
|
|
|
|
|
|
|
*
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 Site: position = -52 score = 5.05047 sequence = TAGTAAGCGCTTACAT Gene: LEUM_1245: Na+/xyloside symporter |
|
*
Pediococcus pentosaceus ATCC 25745 Site: position = -150 score = 4.17263 sequence = TTGTAAGCGAATACAC Site: position = -129 score = 4.36171 sequence = ATGTCAACGCTTTTAT Site: position = -107 score = 4.66834 sequence = TTGAAAACGCTTTACA Gene: PEPE_0185: Na+/xyloside symporter |
Na+/xyloside symporter |
| xylR |
|
*2
Lactobacillus brevis ATCC 367 Site: position = -122 score = 3.96757 sequence = GTGTTACCGTTTGCAA Gene: LVIS_2109: Xylose repressor XylR, ROK family Gene: LVIS_0464: Xylose repressor XylR, ROK family |
|
|
Gene: LAF_0400: Xylose repressor XylR, ROK family |
|
|
|
|
|
|
|
Gene: LEUM_0129: Xylose repressor XylR, ROK family |
|
Gene: PEPE_0186: Xylose repressor XylR, ROK family |
Xylose repressor XylR, ROK family |
| xylA |
|
*
Lactobacillus brevis ATCC 367 Site: position = -91 score = 3.92 sequence = GCGAAAACGCTTGCAT Gene: LVIS_0183: Xylose isomerase (EC 5.3.1.5) |
|
|
*
Lactobacillus fermentum IFO 3956 Site: position = -217 score = 4.29029 sequence = TGGGAAGCGGTTTCTA Gene: LAF_0402: Xylose isomerase (EC 5.3.1.5) |
|
|
|
|
|
|
|
*
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 Site: position = -83 score = 4.95287 sequence = ATGAAAGCGTATACAA Gene: LEUM_0130: Xylose isomerase (EC 5.3.1.5) |
|
Gene: PEPE_0187: Xylose isomerase (EC 5.3.1.5) |
Xylose isomerase (EC 5.3.1.5) |
| xylB |
|
Gene: LVIS_0184: Xylulose kinase (EC 2.7.1.17) |
|
|
Gene: LAF_0403: Xylulose kinase (EC 2.7.1.17) |
|
|
|
|
Gene: LGG_02743: Xylulose kinase (EC 2.7.1.17) |
|
|
Gene: LEUM_0131: Xylulose kinase (EC 2.7.1.17) |
|
Gene: PEPE_0188: Xylulose kinase (EC 2.7.1.17) |
Xylulose kinase (EC 2.7.1.17) |
| CRON 14. | ||||||||||||||||
| ptcA |
|
*
Lactobacillus brevis ATCC 367 Site: position = -96 score = 4.25803 sequence = TTGGAAACGCTTCCCA Gene: LVIS_2210: Putrescine carbamoyltransferase (EC 2.1.3.6) |
|
|
|
|
|
|
|
|
*
Lactobacillus sakei subsp. sakei 23K Site: position = -42 score = 4.31756 sequence = TTGTAAGCGTAGTCAA Gene: LSA0067: Putrescine carbamoyltransferase (EC 2.1.3.6) |
|
|
|
*
Pediococcus pentosaceus ATCC 25745 Site: position = -83 score = 4.52229 sequence = TTGGAAACGCTTTATT Gene: PEPE_0189: Putrescine carbamoyltransferase (EC 2.1.3.6) |
Putrescine carbamoyltransferase (EC 2.1.3.6) |
| aguD |
|
Gene: LVIS_2209: Agmatine:putrescine antiporter |
|
|
|
|
|
|
|
|
2
Lactobacillus sakei subsp. sakei 23K Gene: LSA0068: Agmatine:putrescine antiporter Gene: LSA0069: Agmatine:putrescine antiporter |
|
|
|
Gene: PEPE_0190: Agmatine:putrescine antiporter |
Agmatine:putrescine antiporter |
| aguA1 |
|
Gene: LVIS_2208: Agmatine iminohydrolase (EC 3.5.3.12) |
|
|
|
|
|
|
|
|
Gene: LSA0070: Agmatine iminohydrolase (EC 3.5.3.12) |
|
|
|
Gene: PEPE_0191: Agmatine iminohydrolase (EC 3.5.3.12) |
Agmatine iminohydrolase (EC 3.5.3.12) |
| arcC2 |
|
Gene: LVIS_2207: Carbamate kinase (EC 2.7.2.2) |
|
|
|
|
|
|
|
|
Gene: LSA0071: Carbamate kinase (EC 2.7.2.2) |
|
|
|
Gene: PEPE_0192: Carbamate kinase (EC 2.7.2.2) |
Carbamate kinase (EC 2.7.2.2) |
| aguA2 |
|
Gene: LVIS_2206: Agmatine iminohydrolase (EC 3.5.3.12) |
|
|
|
|
|
|
|
|
Gene: LSA0072: Agmatine iminohydrolase (EC 3.5.3.12) |
|
|
|
Gene: PEPE_0193: Agmatine iminohydrolase (EC 3.5.3.12) |
Agmatine iminohydrolase (EC 3.5.3.12) |
| LVIS_2205 |
|
Gene: LVIS_2205: Transcriptional regulator, RpiR family |
|
|
|
|
|
|
|
|
Gene: LSA0073: Transcriptional regulator, RpiR family |
|
|
|
Gene: PEPE_0194: Transcriptional regulator, RpiR family |
Transcriptional regulator, RpiR family |
| CRON 15. | ||||||||||||||||
| adhA |
|
*2
Lactobacillus brevis ATCC 367 Gene: LVIS_1019: Alcohol dehydrogenase, Zn-dependent (EC 1.1.1.1) Site: position = -90 score = 4.24157 sequence = ATGTAAGCGCTTACGC Gene: LVIS_0254: Alcohol dehydrogenase, Zn-dependent (EC 1.1.1.1) |
|
|
Gene: LAF_1528: Alcohol dehydrogenase, Zn-dependent (EC 1.1.1.1) |
|
|
|
Gene: LAR_1406: Alcohol dehydrogenase, Zn-dependent (EC 1.1.1.1) |
|
*
Lactobacillus sakei subsp. sakei 23K Site: position = -39 score = 4.83244 sequence = ATGGAAACGATTTCAA Gene: LSA1702: Alcohol dehydrogenase, Zn-dependent (EC 1.1.1.1) |
|
*
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 Site: position = -16 score = 3.80563 sequence = AAGAAAGAGGTTAAAA Gene: LEUM_1919: Alcohol dehydrogenase, Zn-dependent (EC 1.1.1.1) |
*
Oenococcus oeni PSU-1 Site: position = -229 score = 4.16349 sequence = AAGTAAGCGCTTCCAC Gene: OEOE_0527: Alcohol dehydrogenase, Zn-dependent (EC 1.1.1.1) |
|
Alcohol dehydrogenase, Zn-dependent (EC 1.1.1.1) |
| CRON 16. | ||||||||||||||||
| galK |
*
Lactobacillus acidophilus NCFM Site: position = -36 score = 4.28664 sequence = CTGAAAACGATTACAG Gene: LBA1459: Galactokinase (EC 2.7.1.6) |
*
Lactobacillus brevis ATCC 367 Site: position = -98 score = 4.74788 sequence = ATGAAAACGTTTTATA Gene: LVIS_1904: Galactokinase (EC 2.7.1.6) |
*
Lactobacillus casei ATCC 334 Site: position = -65 score = 4.73442 sequence = ATAAAAACGGTTACAA Gene: LSEI_0664: Galactokinase (EC 2.7.1.6) |
|
*
Lactobacillus fermentum IFO 3956 Site: position = -99 score = 4.09275 sequence = ATGTAAGCGCTCTATT Gene: LAF_1792: Galactokinase (EC 2.7.1.6) |
*
Lactobacillus helveticus DPC 4571 Site: position = -37 score = 4.7613 sequence = TTGAAAACGATTACAG Gene: lhv_1501: Galactokinase (EC 2.7.1.6) |
*
Lactobacillus johnsonii NCC 533 Site: position = -36 score = 5.05059 sequence = ATGAAAACGATTACAA Gene: LJ0859: Galactokinase (EC 2.7.1.6) |
Gene: lp_3482: Galactokinase (EC 2.7.1.6) |
*
Lactobacillus reuteri JCM 1112 Site: position = -93 score = 4.35667 sequence = TTGTAAGCGCTTATTG Site: position = -125 score = 4.45024 sequence = GTGTAATCGTTTTCTT Gene: LAR_1662: Galactokinase (EC 2.7.1.6) |
*
Lactobacillus rhamnosus GG Site: position = -64 score = 4.73442 sequence = ATAAAAACGGTTACAA Gene: LGG_00653: Galactokinase (EC 2.7.1.6) |
*
Lactobacillus sakei subsp. sakei 23K Site: position = -31 score = 4.51462 sequence = ATGAAAGCGATTAATA Gene: LSA0764: Galactokinase (EC 2.7.1.6) |
*
Lactobacillus salivarius subsp. salivarius UCC118 Site: position = -44 score = 4.31102 sequence = AATAAAACGTTTTCTT Gene: LSL_0381: Galactokinase (EC 2.7.1.6) |
3
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 Gene: LEUM_0883: Galactokinase (EC 2.7.1.6) Gene: LEUM_1313: Galactokinase (EC 2.7.1.6) Gene: LEUM_1069: Galactokinase (EC 2.7.1.6) |
Gene: OEOE_0304: Galactokinase (EC 2.7.1.6) |
Gene: PEPE_0206: Galactokinase (EC 2.7.1.6) |
Galactokinase (EC 2.7.1.6) |
| galE |
|
Gene: LVIS_1903: UDP-glucose 4-epimerase (EC 5.1.3.2) |
Gene: LSEI_0665: UDP-glucose 4-epimerase (EC 5.1.3.2) |
|
|
|
|
Gene: lp_3481: UDP-glucose 4-epimerase (EC 5.1.3.2) |
|
Gene: LGG_00654: UDP-glucose 4-epimerase (EC 5.1.3.2) |
Gene: LSA0765: UDP-glucose 4-epimerase (EC 5.1.3.2) |
Gene: LSL_0382: UDP-glucose 4-epimerase (EC 5.1.3.2) |
Gene: LEUM_1068: UDP-glucose 4-epimerase (EC 5.1.3.2) |
|
Gene: PEPE_0207: UDP-glucose 4-epimerase (EC 5.1.3.2) |
UDP-glucose 4-epimerase (EC 5.1.3.2) |
| galT |
Gene: LBA1458: Galactose-1-phosphate uridylyltransferase (EC 2.7.7.10) |
Gene: LVIS_1902: Galactose-1-phosphate uridylyltransferase (EC 2.7.7.10) |
Gene: LSEI_0666: Galactose-1-phosphate uridylyltransferase (EC 2.7.7.10) |
|
Gene: LAF_1791: Galactose-1-phosphate uridylyltransferase (EC 2.7.7.10) |
Gene: lhv_1500: Galactose-1-phosphate uridylyltransferase (EC 2.7.7.10) |
Gene: LJ0860: Galactose-1-phosphate uridylyltransferase (EC 2.7.7.10) |
Gene: lp_3480: Galactose-1-phosphate uridylyltransferase (EC 2.7.7.10) |
Gene: LAR_1661: Galactose-1-phosphate uridylyltransferase (EC 2.7.7.10) |
Gene: LGG_00655: Galactose-1-phosphate uridylyltransferase (EC 2.7.7.10) |
Gene: LSA0766: Galactose-1-phosphate uridylyltransferase (EC 2.7.7.10) |
Gene: LSL_0383: Galactose-1-phosphate uridylyltransferase (EC 2.7.7.10) |
2
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 Gene: LEUM_0884: Galactose-1-phosphate uridylyltransferase (EC 2.7.7.10) Gene: LEUM_1067: Galactose-1-phosphate uridylyltransferase (EC 2.7.7.10) |
Gene: OEOE_0303: Galactose-1-phosphate uridylyltransferase (EC 2.7.7.10) |
Gene: PEPE_0208: Galactose-1-phosphate uridylyltransferase (EC 2.7.7.10) |
Galactose-1-phosphate uridylyltransferase (EC 2.7.7.10) |
| galR |
|
Gene: LVIS_1901: Galactose utilization transcriptional regulator GalR, LacI family |
Gene: LSEI_0667: Galactose utilization transcriptional regulator GalR, LacI family |
|
Gene: LAF_1790: Galactose utilization transcriptional regulator GalR, LacI family |
|
|
Gene: lp_3479: Galactose utilization transcriptional regulator GalR, LacI family |
Gene: LAR_1660: Galactose utilization transcriptional regulator GalR, LacI family |
Gene: LGG_00656: Galactose utilization transcriptional regulator GalR, LacI family |
|
|
|
Gene: OEOE_0302: Galactose utilization transcriptional regulator GalR, LacI family |
|
Galactose utilization transcriptional regulator GalR, LacI family |
| galM |
Gene: LBA1457: Aldose 1-epimerase (EC 5.1.3.3) |
|
Gene: LSEI_0668: Aldose 1-epimerase (EC 5.1.3.3) |
|
|
Gene: lhv_1499: Aldose 1-epimerase (EC 5.1.3.3) |
Gene: LJ0861: Aldose 1-epimerase (EC 5.1.3.3) |
|
|
Gene: LGG_00657: Aldose 1-epimerase (EC 5.1.3.3) |
Gene: LSA0767: Aldose 1-epimerase (EC 5.1.3.3) |
|
|
Gene: OEOE_0301: Aldose 1-epimerase (EC 5.1.3.3) |
Gene: PEPE_1059: Aldose 1-epimerase (EC 5.1.3.3) |
Aldose 1-epimerase (EC 5.1.3.3) |
| melA |
|
|
|
|
|
|
|
|
|
|
|
|
*
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 Site: position = -77 score = 4.74695 sequence = AAGTAACCGTTTACAT Gene: LEUM_0882: Alpha-galactosidase (EC 3.2.1.22) |
|
|
Alpha-galactosidase (EC 3.2.1.22) |
| lacS |
|
|
|
|
|
|
|
|
|
|
|
|
*
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 Site: position = -66 score = 5.25904 sequence = TTGTAAACGCTTACAT Gene: LEUM_1314: Lactose and galactose permease, GPH translocator family |
Gene: OEOE_0305: Lactose and galactose permease, GPH translocator family |
|
Lactose and galactose permease, GPH translocator family |
| CRON 17. | ||||||||||||||||
| ulaG |
|
|
*
Lactobacillus casei ATCC 334 Site: position = -69 score = 4.22618 sequence = TTGTAAGCGTATCCAG Gene: LSEI_2739: Probable L-ascorbate-6-phosphate lactonase UlaG (EC 3.1.1.-) (L-ascorbate utilization protein G) |
|
|
|
|
|
|
*
Lactobacillus rhamnosus GG Site: position = -68 score = 4.7098 sequence = TTGTAAGCGCAATCAA Gene: LGG_02733: Probable L-ascorbate-6-phosphate lactonase UlaG (EC 3.1.1.-) (L-ascorbate utilization protein G) |
|
|
*
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 Site: position = -19 score = 4.1331 sequence = TAGAAAGGGTTTAAAT Site: position = -53 score = 4.88989 sequence = ATGTAAGCGCATACAT Gene: LEUM_1998: Probable L-ascorbate-6-phosphate lactonase UlaG (EC 3.1.1.-) (L-ascorbate utilization protein G) |
|
|
Probable L-ascorbate-6-phosphate lactonase UlaG (EC 3.1.1.-) (L-ascorbate utilization protein G) |
| ulaC |
|
|
Gene: LSEI_2738: Ascorbate-specific PTS system, EIIA component (EC 2.7.1.-) |
|
|
|
|
|
|
Gene: LGG_02732: Ascorbate-specific PTS system, EIIA component (EC 2.7.1.-) |
|
|
Gene: LEUM_1997: Ascorbate-specific PTS system, EIIA component (EC 2.7.1.-) |
|
|
Ascorbate-specific PTS system, EIIA component (EC 2.7.1.-) |
| ulaA |
|
|
Gene: LSEI_2737: Ascorbate-specific PTS system, EIIC component |
|
|
|
|
|
|
Gene: LGG_02731: Ascorbate-specific PTS system, EIIC component |
|
|
Gene: LEUM_1996: Ascorbate-specific PTS system, EIIC component |
|
|
Ascorbate-specific PTS system, EIIC component |
| ulaB |
|
|
Gene: LSEI_2736: Ascorbate-specific PTS system, EIIB component (EC 2.7.1.69) |
|
|
|
|
|
|
Gene: LGG_02730: Ascorbate-specific PTS system, EIIB component (EC 2.7.1.69) |
|
|
Gene: LEUM_1995: Ascorbate-specific PTS system, EIIB component (EC 2.7.1.69) |
|
|
Ascorbate-specific PTS system, EIIB component (EC 2.7.1.69) |
| ulaD |
|
|
Gene: LSEI_2735: 3-keto-L-gulonate 6-phosphate decarboxylase (EC 4.1.1.85) |
|
|
|
|
|
|
Gene: LGG_02728: 3-keto-L-gulonate 6-phosphate decarboxylase (EC 4.1.1.85) |
|
|
Gene: LEUM_1994: 3-keto-L-gulonate 6-phosphate decarboxylase (EC 4.1.1.85) |
|
|
3-keto-L-gulonate 6-phosphate decarboxylase (EC 4.1.1.85) |
| CRON 18. | ||||||||||||||||
| dhaK |
*
Lactobacillus acidophilus NCFM Site: position = -35 score = 4.71739 sequence = TTGTAAGCGATTGCAT Gene: LBA1433: Phosphoenolpyruvate-dihydroxyacetone phosphotransferase (EC 2.7.1.121), dihydroxyacetone binding subunit DhaK |
|
Gene: LSEI_0421: Phosphoenolpyruvate-dihydroxyacetone phosphotransferase (EC 2.7.1.121), dihydroxyacetone binding subunit DhaK |
|
|
|
|
*
Lactobacillus plantarum WCFS1 Site: position = -58 score = 4.62707 sequence = TTGAAATCGGATTCAT Gene: lp_0168: Phosphoenolpyruvate-dihydroxyacetone phosphotransferase (EC 2.7.1.121), dihydroxyacetone binding subunit DhaK |
|
Gene: LGG_00509: Phosphoenolpyruvate-dihydroxyacetone phosphotransferase (EC 2.7.1.121), dihydroxyacetone binding subunit DhaK |
|
*
Lactobacillus salivarius subsp. salivarius UCC118 Site: position = -64 score = 5.04414 sequence = TTGAAAGCGTTTATAT Gene: LSL_1633: Phosphoenolpyruvate-dihydroxyacetone phosphotransferase (EC 2.7.1.121), dihydroxyacetone binding subunit DhaK |
|
|
*
Pediococcus pentosaceus ATCC 25745 Site: position = -63 score = 4.80716 sequence = TTGTAATCGCTTTCTA Gene: PEPE_1662: Phosphoenolpyruvate-dihydroxyacetone phosphotransferase (EC 2.7.1.121), dihydroxyacetone binding subunit DhaK |
Phosphoenolpyruvate-dihydroxyacetone phosphotransferase (EC 2.7.1.121), dihydroxyacetone binding subunit DhaK |
| dhaL |
Gene: LBA1434: Phosphoenolpyruvate-dihydroxyacetone phosphotransferase (EC 2.7.1.121), ADP-binding subunit DhaL |
|
Gene: LSEI_0420: Phosphoenolpyruvate-dihydroxyacetone phosphotransferase (EC 2.7.1.121), ADP-binding subunit DhaL |
|
|
|
|
Gene: lp_0169: Phosphoenolpyruvate-dihydroxyacetone phosphotransferase (EC 2.7.1.121), ADP-binding subunit DhaL |
|
Gene: LGG_00508: Phosphoenolpyruvate-dihydroxyacetone phosphotransferase (EC 2.7.1.121), ADP-binding subunit DhaL |
|
Gene: LSL_1632: Phosphoenolpyruvate-dihydroxyacetone phosphotransferase (EC 2.7.1.121), ADP-binding subunit DhaL |
|
|
Gene: PEPE_1661: Phosphoenolpyruvate-dihydroxyacetone phosphotransferase (EC 2.7.1.121), ADP-binding subunit DhaL |
Phosphoenolpyruvate-dihydroxyacetone phosphotransferase (EC 2.7.1.121), ADP-binding subunit DhaL |
| dhaM |
Gene: LBA1435: Phosphoenolpyruvate-dihydroxyacetone phosphotransferase (EC 2.7.1.121), subunit DhaM; DHA-specific IIA component |
|
Gene: LSEI_0419: Phosphoenolpyruvate-dihydroxyacetone phosphotransferase (EC 2.7.1.121), subunit DhaM; DHA-specific IIA component |
|
|
|
|
Gene: lp_0170: Phosphoenolpyruvate-dihydroxyacetone phosphotransferase (EC 2.7.1.121), subunit DhaM; DHA-specific IIA component |
|
Gene: LGG_00506: Phosphoenolpyruvate-dihydroxyacetone phosphotransferase (EC 2.7.1.121), subunit DhaM; DHA-specific IIA component |
|
Gene: LSL_1631: Phosphoenolpyruvate-dihydroxyacetone phosphotransferase (EC 2.7.1.121), subunit DhaM; DHA-specific IIA component |
|
|
Gene: PEPE_1660: Phosphoenolpyruvate-dihydroxyacetone phosphotransferase (EC 2.7.1.121), subunit DhaM; DHA-specific IIA component |
Phosphoenolpyruvate-dihydroxyacetone phosphotransferase (EC 2.7.1.121), subunit DhaM; DHA-specific IIA component |
| glpF2 |
Gene: LBA1436: Glycerol uptake facilitator protein |
*
Lactobacillus brevis ATCC 367 Site: position = -113 score = 4.7438 sequence = ATGATACCGCTTACAA Gene: LVIS_1619: Glycerol uptake facilitator protein |
|
|
|
|
|
Gene: lp_0171: Glycerol uptake facilitator protein |
*
Lactobacillus reuteri JCM 1112 Site: position = -50 score = 4.66185 sequence = TAGAAAACGCATACAA Gene: LAR_1640: Glycerol uptake facilitator protein |
|
|
2
Lactobacillus salivarius subsp. salivarius UCC118 Gene: LSL_0112: Glycerol uptake facilitator protein Gene: LSL_1630: Glycerol uptake facilitator protein |
|
|
|
Glycerol uptake facilitator protein |
| CRON 19. | ||||||||||||||||
| fruR |
*
Lactobacillus acidophilus NCFM Site: position = -37 score = 4.16885 sequence = GAGAAAGCGAATACAA Gene: LBA1779: Fructose utilization transcriptional regulator FruR, DeoR family |
|
Gene: LSEI_1349: Fructose utilization transcriptional regulator FruR, DeoR family |
*
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 Site: position = -164 score = 4.00288 sequence = GAGAAAGCCTTTACAA Gene: LBUL_1889: Fructose utilization transcriptional regulator FruR, DeoR family |
|
*
Lactobacillus helveticus DPC 4571 Site: position = 12 score = 4.268 sequence = GAGAAAGCGGATACAA Gene: lhv_1846: Fructose utilization transcriptional regulator FruR, DeoR family |
*
Lactobacillus johnsonii NCC 533 Site: position = -40 score = 4.11424 sequence = CTGAAAGCGTTTATCA Gene: LJ0570: Fructose utilization transcriptional regulator FruR, DeoR family |
*
Lactobacillus plantarum WCFS1 Site: position = -6 score = 4.31065 sequence = TTGAAAGTGCTTACAG Gene: lp_2095: Fructose utilization transcriptional regulator FruR, DeoR family |
|
Gene: LGG_01361: Fructose utilization transcriptional regulator FruR, DeoR family |
*
Lactobacillus sakei subsp. sakei 23K Site: position = -40 score = 4.3181 sequence = TTGTAAACGATGACAT Site: position = -130 score = 3.9748 sequence = ATGAAAACCTTTACAC Gene: LSA1048: Fructose utilization transcriptional regulator FruR, DeoR family |
Gene: LSL_0163: Fructose utilization transcriptional regulator FruR, DeoR family |
|
|
*
Pediococcus pentosaceus ATCC 25745 Site: position = -6 score = 4.2614 sequence = ATGAAAGTGCTTACAG Gene: PEPE_1166: Fructose utilization transcriptional regulator FruR, DeoR family |
Fructose utilization transcriptional regulator FruR, DeoR family |
| fruB |
Gene: LBA1778: 1-phosphofructokinase (EC 2.7.1.56) |
|
Gene: LSEI_1348: 1-phosphofructokinase (EC 2.7.1.56) |
Gene: LBUL_1888: 1-phosphofructokinase (EC 2.7.1.56) |
|
Gene: lhv_1845: 1-phosphofructokinase (EC 2.7.1.56) |
Gene: LJ0571: 1-phosphofructokinase (EC 2.7.1.56) |
Gene: lp_2096: 1-phosphofructokinase (EC 2.7.1.56) |
|
Gene: LGG_01360: 1-phosphofructokinase (EC 2.7.1.56) |
Gene: LSA1049: 1-phosphofructokinase (EC 2.7.1.56) |
Gene: LSL_0164: 1-phosphofructokinase (EC 2.7.1.56) |
|
|
Gene: PEPE_1165: 1-phosphofructokinase (EC 2.7.1.56) |
1-phosphofructokinase (EC 2.7.1.56) |
| fruA |
Gene: LBA1777: Fructose-specific PTS system, IIABC component (EC 2.7.1.69) |
|
Gene: LSEI_1347: Fructose-specific PTS system, IIABC component (EC 2.7.1.69) |
Gene: LBUL_1887: Fructose-specific PTS system, IIABC component (EC 2.7.1.69) |
|
Gene: lhv_1844: Fructose-specific PTS system, IIABC component (EC 2.7.1.69) |
Gene: LJ0572: Fructose-specific PTS system, IIABC component (EC 2.7.1.69) |
Gene: lp_2097: Fructose-specific PTS system, IIABC component (EC 2.7.1.69) |
|
Gene: LGG_01359: Fructose-specific PTS system, IIABC component (EC 2.7.1.69) |
Gene: LSA1050: Fructose-specific PTS system, IIABC component (EC 2.7.1.69) |
Gene: LSL_0165: Fructose-specific PTS system, IIABC component (EC 2.7.1.69) |
|
|
Gene: PEPE_1164: Fructose-specific PTS system, IIABC component (EC 2.7.1.69) |
Fructose-specific PTS system, IIABC component (EC 2.7.1.69) |
| CRON 20. | ||||||||||||||||
| manL |
*
Lactobacillus acidophilus NCFM Site: position = -42 score = 4.51171 sequence = ATAAAAGCGGATTCAT Gene: LBA0452: Mannose-specific PTS system, IIAB component (EC 2.7.1.69) |
|
Gene: LSEI_2829: Mannose-specific PTS system, IIAB component (EC 2.7.1.69) |
Gene: LBUL_1673: Mannose-specific PTS system, IIAB component (EC 2.7.1.69) |
*
Lactobacillus fermentum IFO 3956 Site: position = -140 score = 4.67142 sequence = TAGTAAGCGTTTACAG Gene: LAF_0391: Mannose-specific PTS system, IIAB component (EC 2.7.1.69) |
*
Lactobacillus helveticus DPC 4571 Site: position = -42 score = 4.51171 sequence = ATAAAAGCGGATTCAT Gene: lhv_0480: Mannose-specific PTS system, IIAB component (EC 2.7.1.69) |
*
Lactobacillus johnsonii NCC 533 Site: position = -106 score = 4.44161 sequence = ATGCAAGCATTTTCAA Site: position = -68 score = 4.14998 sequence = AAGCAAACGTATACAT Gene: LJ0503: Mannose-specific PTS system, IIAB component (EC 2.7.1.69) |
*
Lactobacillus plantarum WCFS1 Site: position = 1 score = 3.99227 sequence = TGGTAAGCATTATCAT Gene: lp_0575: Mannose-specific PTS system, IIAB component (EC 2.7.1.69) |
|
Gene: LGG_02838: Mannose-specific PTS system, IIAB component (EC 2.7.1.69) |
*
Lactobacillus sakei subsp. sakei 23K Site: position = -136 score = 4.15092 sequence = AGTAAAGCGTTTTAAA Site: position = -57 score = 4.59603 sequence = TTGTTAGCGTTTTTAT Gene: LSA0449: Mannose-specific PTS system, IIAB component (EC 2.7.1.69) |
*2
Lactobacillus salivarius subsp. salivarius UCC118 Site: position = -109 score = 4.26042 sequence = TAGAAATCGTTTACAC Gene: LSL_0086: Mannose-specific PTS system, IIAB component (EC 2.7.1.69) Site: position = -131 score = 4.30772 sequence = TAGTAAGTGTTTTCAA Site: position = -61 score = 4.14416 sequence = ATGAAAAGGCTTTATT Gene: LSL_0654: Mannose-specific PTS system, IIAB component (EC 2.7.1.69) |
*
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 Site: position = -100 score = 4.71974 sequence = ATGTAAACGGTAACAA Site: position = -75 score = 5.40812 sequence = TTGAAAGCGTTTACAA Gene: LEUM_1768: Mannose-specific PTS system, IIAB component (EC 2.7.1.69) |
Gene: OEOE_0464: Mannose-specific PTS system, IIAB component (EC 2.7.1.69) |
*
Pediococcus pentosaceus ATCC 25745 Site: position = -146 score = 4.51683 sequence = TTGAAAGCGTTTTTTG Gene: PEPE_1518: Mannose-specific PTS system, IIAB component (EC 2.7.1.69) |
Mannose-specific PTS system, IIAB component (EC 2.7.1.69) |
| manM |
Gene: LBA0455: Mannose-specific PTS system, IIC component (EC 2.7.1.69) |
|
Gene: LSEI_2828: Mannose-specific PTS system, IIC component (EC 2.7.1.69) |
Gene: LBUL_1672: Mannose-specific PTS system, IIC component (EC 2.7.1.69) |
Gene: LAF_0392: Mannose-specific PTS system, IIC component (EC 2.7.1.69) |
Gene: lhv_0481: Mannose-specific PTS system, IIC component (EC 2.7.1.69) |
Gene: LJ0504: Mannose-specific PTS system, IIC component (EC 2.7.1.69) |
Gene: lp_0576: Mannose-specific PTS system, IIC component (EC 2.7.1.69) |
|
Gene: LGG_02837: Mannose-specific PTS system, IIC component (EC 2.7.1.69) |
Gene: LSA0450: Mannose-specific PTS system, IIC component (EC 2.7.1.69) |
2
Lactobacillus salivarius subsp. salivarius UCC118 Gene: LSL_0087: Mannose-specific PTS system, IIC component (EC 2.7.1.69) Gene: LSL_0655: Mannose-specific PTS system, IIC component (EC 2.7.1.69) |
Gene: LEUM_1767: Mannose-specific PTS system, IIC component (EC 2.7.1.69) |
Gene: OEOE_0465: Mannose-specific PTS system, IIC component (EC 2.7.1.69) |
Gene: PEPE_1517: Mannose-specific PTS system, IIC component (EC 2.7.1.69) |
Mannose-specific PTS system, IIC component (EC 2.7.1.69) |
| manN |
Gene: LBA0456: Mannose-specific PTS system, IID component (EC 2.7.1.69) |
|
Gene: LSEI_2827: Mannose-specific PTS system, IID component (EC 2.7.1.69) |
Gene: LBUL_1671: Mannose-specific PTS system, IID component (EC 2.7.1.69) |
Gene: LAF_0393: Mannose-specific PTS system, IID component (EC 2.7.1.69) |
Gene: lhv_0482: Mannose-specific PTS system, IID component (EC 2.7.1.69) |
Gene: LJ0505: Mannose-specific PTS system, IID component (EC 2.7.1.69) |
Gene: lp_0577: Mannose-specific PTS system, IID component (EC 2.7.1.69) |
|
Gene: LGG_02836: Mannose-specific PTS system, IID component (EC 2.7.1.69) |
Gene: LSA0451: Mannose-specific PTS system, IID component (EC 2.7.1.69) |
2
Lactobacillus salivarius subsp. salivarius UCC118 Gene: LSL_0088: Mannose-specific PTS system, IID component (EC 2.7.1.69) Gene: LSL_0656: Mannose-specific PTS system, IID component (EC 2.7.1.69) |
Gene: LEUM_1766: Mannose-specific PTS system, IID component (EC 2.7.1.69) |
Gene: OEOE_0466: Mannose-specific PTS system, IID component (EC 2.7.1.69) |
Gene: PEPE_1516: Mannose-specific PTS system, IID component (EC 2.7.1.69) |
Mannose-specific PTS system, IID component (EC 2.7.1.69) |
| manO |
Gene: LBA0457: Predicted regulator of the mannose operon, ManO |
|
Gene: LSEI_2826: Predicted regulator of the mannose operon, ManO |
Gene: LBUL_1670: Predicted regulator of the mannose operon, ManO |
Gene: LAF_0394: Predicted regulator of the mannose operon, ManO |
Gene: lhv_0483: Predicted regulator of the mannose operon, ManO |
Gene: LJ0506: Predicted regulator of the mannose operon, ManO |
Gene: lp_0583: Predicted regulator of the mannose operon, ManO |
|
Gene: LGG_02834: Predicted regulator of the mannose operon, ManO |
Gene: LSA0452: Predicted regulator of the mannose operon, ManO |
*2
Lactobacillus salivarius subsp. salivarius UCC118 Gene: LSL_0089: Predicted regulator of the mannose operon, ManO Site: position = -71 score = 4.16181 sequence = TTGTAAGCATTTACGA Gene: LSL_0560: Predicted regulator of the mannose operon, ManO |
Gene: LEUM_1765: Predicted regulator of the mannose operon, ManO |
Gene: OEOE_0467: Predicted regulator of the mannose operon, ManO |
Gene: PEPE_1515: Predicted regulator of the mannose operon, ManO |
Predicted regulator of the mannose operon, ManO |
| CRON 21. | ||||||||||||||||
| pdhA |
|
*
Lactobacillus brevis ATCC 367 Site: position = -117 score = 4.39008 sequence = ATGAAAGGGCTTGCAA Gene: LVIS_1410: Dihydrolipoamide dehydrogenase complex (EC 1.8.1.4), E1 component alpha-subunit |
*
Lactobacillus casei ATCC 334 Site: position = -68 score = 4.07916 sequence = TTGTAAAGATTTTCAT Site: position = -111 score = 4.17523 sequence = AATAAAACGCTTGCAA Gene: LSEI_1305: Dihydrolipoamide dehydrogenase complex (EC 1.8.1.4), E1 component alpha-subunit |
|
*
Lactobacillus fermentum IFO 3956 Site: position = -169 score = 4.51989 sequence = ATGTAAGCGGTAACTT Site: position = -244 score = 4.24913 sequence = ATGTAACGGCTTTCTT Gene: LAF_1140: Dihydrolipoamide dehydrogenase complex (EC 1.8.1.4), E1 component alpha-subunit |
|
|
*
Lactobacillus plantarum WCFS1 Site: position = -67 score = 4.5001 sequence = ATGAAAACGATTACGA Site: position = -118 score = 4.12398 sequence = TTGGAAGGGCTTGCAA Gene: lp_2154: Dihydrolipoamide dehydrogenase complex (EC 1.8.1.4), E1 component alpha-subunit |
*
Lactobacillus reuteri JCM 1112 Site: position = -40 score = 4.33338 sequence = AAGCAATCGCTTACAT Site: position = -90 score = 4.67033 sequence = ATGAAAGCGCTTGTAT Gene: LAR_0608: Dihydrolipoamide dehydrogenase complex (EC 1.8.1.4), E1 component alpha-subunit |
*
Lactobacillus rhamnosus GG Site: position = -111 score = 4.17523 sequence = AATAAAACGCTTGCAA Gene: LGG_01320: Dihydrolipoamide dehydrogenase complex (EC 1.8.1.4), E1 component alpha-subunit |
*
Lactobacillus sakei subsp. sakei 23K Site: position = -115 score = 4.02844 sequence = TGTAAAACGCTTGCAT Gene: LSA1085: Dihydrolipoamide dehydrogenase complex (EC 1.8.1.4), E1 component alpha-subunit |
*
Lactobacillus salivarius subsp. salivarius UCC118 Site: position = -216 score = 4.01509 sequence = GTGATAACGATAACAA Site: position = -67 score = 4.45322 sequence = TTGTAAGCGTTATATA Gene: LSL_0153: Dihydrolipoamide dehydrogenase complex (EC 1.8.1.4), E1 component alpha-subunit |
Gene: LEUM_0737: Dihydrolipoamide dehydrogenase complex (EC 1.8.1.4), E1 component alpha-subunit |
Gene: OEOE_0328: Dihydrolipoamide dehydrogenase complex (EC 1.8.1.4), E1 component alpha-subunit |
Gene: PEPE_1773: Dihydrolipoamide dehydrogenase complex (EC 1.8.1.4), E1 component alpha-subunit |
Dihydrolipoamide dehydrogenase complex (EC 1.8.1.4), E1 component alpha-subunit |
| pdhB |
|
Gene: LVIS_1409: Dihydrolipoamide dehydrogenase complex (EC 1.8.1.4), E1 component beta-subunit |
Gene: LSEI_1306: Dihydrolipoamide dehydrogenase complex (EC 1.8.1.4), E1 component beta-subunit |
|
Gene: LAF_1139: Dihydrolipoamide dehydrogenase complex (EC 1.8.1.4), E1 component beta-subunit |
|
|
Gene: lp_2153: Dihydrolipoamide dehydrogenase complex (EC 1.8.1.4), E1 component beta-subunit |
Gene: LAR_0609: Dihydrolipoamide dehydrogenase complex (EC 1.8.1.4), E1 component beta-subunit |
Gene: LGG_01321: Dihydrolipoamide dehydrogenase complex (EC 1.8.1.4), E1 component beta-subunit |
Gene: LSA1084: Dihydrolipoamide dehydrogenase complex (EC 1.8.1.4), E1 component beta-subunit |
Gene: LSL_0154: Dihydrolipoamide dehydrogenase complex (EC 1.8.1.4), E1 component beta-subunit |
Gene: LEUM_0738: Dihydrolipoamide dehydrogenase complex (EC 1.8.1.4), E1 component beta-subunit |
Gene: OEOE_0329: Dihydrolipoamide dehydrogenase complex (EC 1.8.1.4), E1 component beta-subunit |
Gene: PEPE_1772: Dihydrolipoamide dehydrogenase complex (EC 1.8.1.4), E1 component beta-subunit |
Dihydrolipoamide dehydrogenase complex (EC 1.8.1.4), E1 component beta-subunit |
| pdhC |
|
Gene: LVIS_1408: Dihydrolipoamide dehydrogenase complex (EC 1.8.1.4), E2 component |
Gene: LSEI_1307: Dihydrolipoamide dehydrogenase complex (EC 1.8.1.4), E2 component |
|
Gene: LAF_1138: Dihydrolipoamide dehydrogenase complex (EC 1.8.1.4), E2 component |
|
|
Gene: lp_2152: Dihydrolipoamide dehydrogenase complex (EC 1.8.1.4), E2 component |
Gene: LAR_0610: Dihydrolipoamide dehydrogenase complex (EC 1.8.1.4), E2 component |
Gene: LGG_01322: Dihydrolipoamide dehydrogenase complex (EC 1.8.1.4), E2 component |
Gene: LSA1083: Dihydrolipoamide dehydrogenase complex (EC 1.8.1.4), E2 component |
Gene: LSL_0155: Dihydrolipoamide dehydrogenase complex (EC 1.8.1.4), E2 component |
Gene: LEUM_0739: Dihydrolipoamide dehydrogenase complex (EC 1.8.1.4), E2 component |
Gene: OEOE_0330: Dihydrolipoamide dehydrogenase complex (EC 1.8.1.4), E2 component |
Gene: PEPE_1771: Dihydrolipoamide dehydrogenase complex (EC 1.8.1.4), E2 component |
Dihydrolipoamide dehydrogenase complex (EC 1.8.1.4), E2 component |
| pdhD |
|
Gene: LVIS_1407: Dihydrolipoamide dehydrogenase complex (EC 1.8.1.4), E3 component |
Gene: LSEI_1308: Dihydrolipoamide dehydrogenase complex (EC 1.8.1.4), E3 component |
|
Gene: LAF_1137: Dihydrolipoamide dehydrogenase complex (EC 1.8.1.4), E3 component |
|
|
Gene: lp_2151: Dihydrolipoamide dehydrogenase complex (EC 1.8.1.4), E3 component |
Gene: LAR_0611: Dihydrolipoamide dehydrogenase complex (EC 1.8.1.4), E3 component |
Gene: LGG_01323: Dihydrolipoamide dehydrogenase complex (EC 1.8.1.4), E3 component |
Gene: LSA1082: Dihydrolipoamide dehydrogenase complex (EC 1.8.1.4), E3 component |
Gene: LSL_0156: Dihydrolipoamide dehydrogenase complex (EC 1.8.1.4), E3 component |
Gene: LEUM_0740: Dihydrolipoamide dehydrogenase complex (EC 1.8.1.4), E3 component |
Gene: OEOE_0331: Dihydrolipoamide dehydrogenase complex (EC 1.8.1.4), E3 component |
Gene: PEPE_1770: Dihydrolipoamide dehydrogenase complex (EC 1.8.1.4), E3 component |
Dihydrolipoamide dehydrogenase complex (EC 1.8.1.4), E3 component |
| lplA1 |
|
*
Lactobacillus brevis ATCC 367 Site: position = -101 score = 4.73325 sequence = TTGTAATCGATTACAA Gene: LVIS_0180: Lipoate-protein ligase A |
*
Lactobacillus casei ATCC 334 Site: position = -101 score = 4.14962 sequence = TCGAAATCGCTTTCTT Gene: LSEI_1473: Lipoate-protein ligase A |
|
Gene: LAF_1136: Lipoate-protein ligase A |
|
|
Gene: lp_2643: Lipoate-protein ligase A |
*
Lactobacillus reuteri JCM 1112 Site: position = -104 score = 4.65445 sequence = TTGCAAACGCTTACTA Gene: LAR_1565: Lipoate-protein ligase A |
*
Lactobacillus rhamnosus GG Site: position = -150 score = 4.14962 sequence = TCGAAATCGCTTTCTT Gene: LGG_01479: Lipoate-protein ligase A |
*
Lactobacillus sakei subsp. sakei 23K Site: position = -20 score = 4.32483 sequence = ATGAAAGGGGTTTTAT Gene: LSA0934: Lipoate-protein ligase A |
Gene: LSL_0157: Lipoate-protein ligase A |
*
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 Site: position = -31 score = 4.86519 sequence = GTGTAAGCGGTTACAA Gene: LEUM_0736: Lipoate-protein ligase A |
*2
Oenococcus oeni PSU-1 Site: position = -53 score = 5.11008 sequence = TTGAAAGCGCTTACAG Gene: OEOE_0327: Lipoate-protein ligase A Gene: OEOE_1555: Lipoate-protein ligase A |
*
Pediococcus pentosaceus ATCC 25745 Site: position = -107 score = 4.01244 sequence = TTTAAAACATTTTAAA Site: position = -40 score = 4.82005 sequence = TAGAAAGCGCTTCCAT Gene: PEPE_1774: Lipoate-protein ligase A |
Lipoate-protein ligase A |
| CRON 22. | ||||||||||||||||
| fbp |
|
|
*
Lactobacillus casei ATCC 334 Site: position = -14 score = 4.08408 sequence = AAGGAAGCTGTTTCAT Site: position = -81 score = 4.31369 sequence = CTGAAACCGTATACAA Gene: LSEI_2045: Fructose-1,6-bisphosphatase, Bacillus type (EC 3.1.3.11) |
|
|
|
|
|
|
*
Lactobacillus rhamnosus GG Site: position = -82 score = 4.78835 sequence = TTGAAACCGTATACAA Gene: LGG_02032: Fructose-1,6-bisphosphatase, Bacillus type (EC 3.1.3.11) |
Gene: LSA1778: Fructose-1,6-bisphosphatase, Bacillus type (EC 3.1.3.11) |
Gene: LSL_1903: Fructose-1,6-bisphosphatase, Bacillus type (EC 3.1.3.11) |
|
|
*
Pediococcus pentosaceus ATCC 25745 Site: position = -75 score = 4.91482 sequence = TTGTAAGCGGTTTTAT Gene: PEPE_0144: Fructose-1,6-bisphosphatase, Bacillus type (EC 3.1.3.11) |
Fructose-1,6-bisphosphatase, Bacillus type (EC 3.1.3.11) |
| CRON 23. | ||||||||||||||||
| araE |
|
*
Lactobacillus brevis ATCC 367 Site: position = -79 score = 4.35109 sequence = TTGAAAGGGCTTTCGA Gene: LVIS_1743: Arabinose-proton symporter |
|
|
*
Lactobacillus fermentum IFO 3956 Site: position = -76 score = 4.44445 sequence = GTGAAATCGCTTACAG Site: position = -100 score = 4.28905 sequence = TGGTAAGCGTTTTATA Gene: LAF_1555: Arabinose-proton symporter |
|
|
*
Lactobacillus plantarum WCFS1 Site: position = -63 score = 4.61563 sequence = TTGAAAGGGCTTTCTA Gene: lp_3557: Arabinose-proton symporter |
*
Lactobacillus reuteri JCM 1112 Site: position = -63 score = 4.71345 sequence = ATGAAAGCGCGTTCAT Gene: LAR_0467: Arabinose-proton symporter |
|
*
Lactobacillus sakei subsp. sakei 23K Site: position = -78 score = 4.66947 sequence = TTGAAACCGTTTTATA Gene: LSA1860: Arabinose-proton symporter |
|
Gene: LEUM_0853: Arabinose-proton symporter |
|
*
Pediococcus pentosaceus ATCC 25745 Site: position = -48 score = 4.94223 sequence = ATGAATACGCTTTCAA Gene: PEPE_0162: Arabinose-proton symporter |
Arabinose-proton symporter |
| araB |
|
Gene: LVIS_1742: Ribulokinase (EC 2.7.1.16) |
|
|
*
Lactobacillus fermentum IFO 3956 Site: position = -111 score = 4.62486 sequence = ATGAAAACGGTTTATT Gene: LAF_1558: Ribulokinase (EC 2.7.1.16) |
|
|
Gene: lp_3556: Ribulokinase (EC 2.7.1.16) |
Gene: LAR_0468: Ribulokinase (EC 2.7.1.16) |
|
Gene: LSA1859: Ribulokinase (EC 2.7.1.16) |
|
Gene: LEUM_0854: Ribulokinase (EC 2.7.1.16) |
*
Oenococcus oeni PSU-1 Site: position = -218 score = 4.30116 sequence = ATTTAAACGGTTTTAT Site: position = -116 score = 4.43639 sequence = GTGTAAGCACTTACAA Gene: OEOE_0227: Ribulokinase (EC 2.7.1.16) |
Gene: PEPE_0163: Ribulokinase (EC 2.7.1.16) |
Ribulokinase (EC 2.7.1.16) |
| araD |
|
Gene: LVIS_1741: L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4) |
|
|
Gene: LAF_1557: L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4) |
|
|
Gene: lp_3555: L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4) |
Gene: LAR_0469: L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4) |
|
Gene: LSA1857: L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4) |
|
Gene: LEUM_0855: L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4) |
|
Gene: PEPE_0164: L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4) |
L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4) |
| araA |
|
Gene: LVIS_1740: L-arabinose isomerase (EC 5.3.1.4) |
|
|
Gene: LAF_1554: L-arabinose isomerase (EC 5.3.1.4) |
|
|
Gene: lp_3554: L-arabinose isomerase (EC 5.3.1.4) |
Gene: LAR_0470: L-arabinose isomerase (EC 5.3.1.4) |
|
Gene: LSA1856: L-arabinose isomerase (EC 5.3.1.4) |
|
*
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 Site: position = -104 score = 4.97073 sequence = TTGTAAGCGTTTCCAA Gene: LEUM_0852: L-arabinose isomerase (EC 5.3.1.4) |
|
Gene: PEPE_0165: L-arabinose isomerase (EC 5.3.1.4) |
L-arabinose isomerase (EC 5.3.1.4) |
| CRON 24. | ||||||||||||||||
| galM |
|
|
|
|
*
Lactobacillus fermentum IFO 3956 Site: position = -40 score = 4.58587 sequence = TGGAAAACGCTTACTA Gene: LAF_1662: Aldose 1-epimerase (EC 5.1.3.3); Galactose mutarotase and related enzymes |
|
|
|
*
Lactobacillus reuteri JCM 1112 Site: position = -33 score = 4.43093 sequence = GTAAAAGCGCTTACTT Gene: LAR_1448: Aldose 1-epimerase (EC 5.1.3.3); Galactose mutarotase and related enzymes |
|
|
|
*
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 Site: position = -147 score = 4.62366 sequence = ATGATAGCGCTTCCAA Gene: LEUM_1311: Aldose 1-epimerase (EC 5.1.3.3); Galactose mutarotase and related enzymes |
|
|
Aldose 1-epimerase (EC 5.1.3.3); Galactose mutarotase and related enzymes |
| CRON 25. | ||||||||||||||||
| pnuC |
*
Lactobacillus acidophilus NCFM Site: position = -190 score = 4.70461 sequence = ATAAAAGCGTTTTAAA Gene: LBA1653: NrdR-regulated deoxyribonucleotide transporter; Nicotinamide mononucleotide transporter |
*
Lactobacillus brevis ATCC 367 Site: position = -188 score = 4.58519 sequence = TTGAAAGCGCTTTATG Gene: LVIS_0311: NrdR-regulated deoxyribonucleotide transporter; Nicotinamide mononucleotide transporter |
Gene: LSEI_1204: NrdR-regulated deoxyribonucleotide transporter; Nicotinamide mononucleotide transporter |
|
Gene: LAF_1803: NrdR-regulated deoxyribonucleotide transporter; Nicotinamide mononucleotide transporter |
Gene: lhv_1757: NrdR-regulated deoxyribonucleotide transporter; Nicotinamide mononucleotide transporter |
*
Lactobacillus johnsonii NCC 533 Site: position = -173 score = 4.58942 sequence = AAGAAAGCGCTATCTA Gene: LJ0643: NrdR-regulated deoxyribonucleotide transporter; Nicotinamide mononucleotide transporter |
Gene: lp_0259: NrdR-regulated deoxyribonucleotide transporter; Nicotinamide mononucleotide transporter |
Gene: LAR_1670: NrdR-regulated deoxyribonucleotide transporter; Nicotinamide mononucleotide transporter |
*
Lactobacillus rhamnosus GG Site: position = -158 score = 4.14745 sequence = ATGAAAAGGGTTTCCA Gene: LGG_01221: NrdR-regulated deoxyribonucleotide transporter; Nicotinamide mononucleotide transporter |
Gene: LSA1189: NrdR-regulated deoxyribonucleotide transporter; Nicotinamide mononucleotide transporter |
|
Gene: LEUM_1445: NrdR-regulated deoxyribonucleotide transporter; Nicotinamide mononucleotide transporter |
Gene: OEOE_1395: NrdR-regulated deoxyribonucleotide transporter; Nicotinamide mononucleotide transporter |
Gene: PEPE_0058: NrdR-regulated deoxyribonucleotide transporter; Nicotinamide mononucleotide transporter |
NrdR-regulated deoxyribonucleotide transporter; Nicotinamide mononucleotide transporter |
| CRON 26. | ||||||||||||||||
| mtlA |
|
|
*
Lactobacillus casei ATCC 334 Site: position = -65 score = 4.50117 sequence = TTGTCAGCGATTACAT Gene: LSEI_2888: Mannitol-specific PTS system, IIBC component (EC 2.7.1.69) |
|
|
|
|
*
Lactobacillus plantarum WCFS1 Site: position = -63 score = 4.77961 sequence = TTGAAACCGCTTACCA Gene: lp_0230: Mannitol-specific PTS system, IIBC component (EC 2.7.1.69) |
|
*
Lactobacillus rhamnosus GG Site: position = -65 score = 4.50117 sequence = TTGTCAGCGATTACAT Gene: LGG_02912: Mannitol-specific PTS system, IIBC component (EC 2.7.1.69) |
|
*
Lactobacillus salivarius subsp. salivarius UCC118 Site: position = -56 score = 4.21987 sequence = CAGTAAACGTTATCAT Gene: LSL_1620: Mannitol-specific PTS system, IIBC component (EC 2.7.1.69) |
|
|
|
Mannitol-specific PTS system, IIBC component (EC 2.7.1.69) |
| mtlR |
|
|
Gene: LSEI_2887: Mannitol operon antiterminator, BglG family |
|
|
|
|
Gene: lp_0231: Mannitol operon antiterminator, BglG family |
|
Gene: LGG_02911: Mannitol operon antiterminator, BglG family |
|
Gene: LSL_1628: Mannitol operon antiterminator, BglG family |
|
|
|
Mannitol operon antiterminator, BglG family |
| mtlF |
|
|
Gene: LSEI_2886: Mannitol-specific PTS system, mannitol-specific IIA component (EC 2.7.1.69) |
|
|
|
|
Gene: lp_0232: Mannitol-specific PTS system, mannitol-specific IIA component (EC 2.7.1.69) |
|
Gene: LGG_02910: Mannitol-specific PTS system, mannitol-specific IIA component (EC 2.7.1.69) |
|
Gene: LSL_1619: Mannitol-specific PTS system, mannitol-specific IIA component (EC 2.7.1.69) |
|
|
|
Mannitol-specific PTS system, mannitol-specific IIA component (EC 2.7.1.69) |
| mtlD |
|
|
Gene: LSEI_2885: Mannitol-1-phosphate 5-dehydrogenase (EC 1.1.1.17) |
|
|
|
|
Gene: lp_0233: Mannitol-1-phosphate 5-dehydrogenase (EC 1.1.1.17) |
|
Gene: LGG_02909: Mannitol-1-phosphate 5-dehydrogenase (EC 1.1.1.17) |
|
Gene: LSL_1618: Mannitol-1-phosphate 5-dehydrogenase (EC 1.1.1.17) |
|
|
|
Mannitol-1-phosphate 5-dehydrogenase (EC 1.1.1.17) |
| CRON 27. | ||||||||||||||||
| rhaY |
|
|
|
|
|
|
|
*
Lactobacillus plantarum WCFS1 Site: position = -33 score = 4.73036 sequence = ATGAAACCGCTTACCA Gene: lp_3596: Predicted L-rhamnose permease RhaY |
|
*
Lactobacillus rhamnosus GG Site: position = -64 score = 4.79624 sequence = ATGTAAGCGGTTAAAT Gene: LGG_02691: Predicted L-rhamnose permease RhaY |
|
*
Lactobacillus salivarius subsp. salivarius UCC118 Site: position = -73 score = 4.57692 sequence = TTGAAAACGGTTAATA Gene: LSL_1751: Predicted L-rhamnose permease RhaY |
|
|
|
Predicted L-rhamnose permease RhaY |
| rhaB |
|
|
|
|
|
|
|
Gene: lp_3595: Rhamnulokinase (EC 2.7.1.5) |
|
Gene: LGG_02690: Rhamnulokinase (EC 2.7.1.5) |
|
Gene: LSL_1752: Rhamnulokinase (EC 2.7.1.5) |
|
|
|
Rhamnulokinase (EC 2.7.1.5) |
| rhaU |
|
|
|
|
|
|
|
Gene: lp_3594: L-rhamnose 1-epimerase (EC 5.1.3.-) |
|
Gene: LGG_02689: L-rhamnose 1-epimerase (EC 5.1.3.-) |
|
Gene: LSL_1753: L-rhamnose 1-epimerase (EC 5.1.3.-) |
|
|
|
L-rhamnose 1-epimerase (EC 5.1.3.-) |
| rhaA |
|
|
|
|
|
|
|
Gene: lp_3593: L-rhamnose isomerase (EC 5.3.1.14) |
|
Gene: LGG_02688: L-rhamnose isomerase (EC 5.3.1.14) |
|
Gene: LSL_1754: L-rhamnose isomerase (EC 5.3.1.14) |
|
|
|
L-rhamnose isomerase (EC 5.3.1.14) |
| rhaD |
|
|
|
|
|
|
|
Gene: lp_3592: Rhamnulose-1-phosphate aldolase (EC 4.1.2.19) |
|
Gene: LGG_02687: Rhamnulose-1-phosphate aldolase (EC 4.1.2.19) |
|
Gene: LSL_1755: Rhamnulose-1-phosphate aldolase (EC 4.1.2.19) |
|
|
|
Rhamnulose-1-phosphate aldolase (EC 4.1.2.19) |
| CRON 28. | ||||||||||||||||
| LBA0143 |
Gene: LBA0143: Maltodextrin glucosidase (EC 3.2.1.20); Alpha-glucosidase, family 31 of glycosyl hydrolase |
|
*
Lactobacillus casei ATCC 334 Site: position = -90 score = 4.81686 sequence = TTGAATGCGGTTACAA Gene: LSEI_2769: Maltodextrin glucosidase (EC 3.2.1.20); Alpha-glucosidase, family 31 of glycosyl hydrolase |
Gene: LBUL_0170: Maltodextrin glucosidase (EC 3.2.1.20); Alpha-glucosidase, family 31 of glycosyl hydrolase |
|
*
Lactobacillus helveticus DPC 4571 Site: position = -130 score = 4.71688 sequence = GTAAAAGCGCTTACAT Gene: lhv_0152: Maltodextrin glucosidase (EC 3.2.1.20); Alpha-glucosidase, family 31 of glycosyl hydrolase |
Gene: LJ0115: Maltodextrin glucosidase (EC 3.2.1.20); Alpha-glucosidase, family 31 of glycosyl hydrolase |
|
|
*
Lactobacillus rhamnosus GG Site: position = -77 score = 4.76762 sequence = ATGAATGCGGTTACAA Gene: LGG_02762: Maltodextrin glucosidase (EC 3.2.1.20); Alpha-glucosidase, family 31 of glycosyl hydrolase |
|
|
|
|
|
Maltodextrin glucosidase (EC 3.2.1.20); Alpha-glucosidase, family 31 of glycosyl hydrolase |
| CRON 29. | ||||||||||||||||
| ndk |
|
Gene: LVIS_1367: Nucleoside diphosphate kinase (EC 2.7.4.6) |
*
Lactobacillus casei ATCC 334 Site: position = -108 score = 4.03622 sequence = ATGAAAACGATGAAAA Gene: LSEI_0748: Nucleoside diphosphate kinase (EC 2.7.4.6) |
|
Gene: LAF_1008: Nucleoside diphosphate kinase (EC 2.7.4.6) |
|
|
*
Lactobacillus plantarum WCFS1 Site: position = -37 score = 4.84099 sequence = ATGATACCGCTTTCAA Gene: lp_0242: Nucleoside diphosphate kinase (EC 2.7.4.6) |
*
Lactobacillus reuteri JCM 1112 Site: position = -74 score = 4.56973 sequence = CTAAAAACGCTTTCAA Gene: LAR_0192: Nucleoside diphosphate kinase (EC 2.7.4.6) |
Gene: LGG_00733: Nucleoside diphosphate kinase (EC 2.7.4.6) |
|
Gene: LSL_1936: Nucleoside diphosphate kinase (EC 2.7.4.6) |
*
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 Site: position = -62 score = 4.53261 sequence = TTGTGAACGTTTTCAT Gene: LEUM_1571: Nucleoside diphosphate kinase (EC 2.7.4.6) |
|
2
Pediococcus pentosaceus ATCC 25745 Gene: PEPE_1644: Nucleoside diphosphate kinase (EC 2.7.4.6) Gene: PEPE_1051: Nucleoside diphosphate kinase (EC 2.7.4.6) |
Nucleoside diphosphate kinase (EC 2.7.4.6) |
| CRON 30. | ||||||||||||||||
| pmi |
*
Lactobacillus acidophilus NCFM Site: position = -58 score = 4.30803 sequence = AAGAAAAGGGTTTCAT Gene: LBA0745: Mannose-6-phosphate isomerase (EC 5.3.1.8) |
*
Lactobacillus brevis ATCC 367 Site: position = -86 score = 4.78889 sequence = TAGAAAGCGCTTGCAA Gene: LVIS_1656: Mannose-6-phosphate isomerase (EC 5.3.1.8) |
Gene: LSEI_0292: Mannose-6-phosphate isomerase (EC 5.3.1.8) |
Gene: LBUL_0050: Mannose-6-phosphate isomerase (EC 5.3.1.8) |
|
*
Lactobacillus helveticus DPC 4571 Site: position = -58 score = 4.30803 sequence = AAGAAAAGGGTTTCAT Gene: lhv_0789: Mannose-6-phosphate isomerase (EC 5.3.1.8) |
*
Lactobacillus johnsonii NCC 533 Site: position = -60 score = 4.58285 sequence = TTGAAAGTGGTTTCAA Gene: LJ0916: Mannose-6-phosphate isomerase (EC 5.3.1.8) |
Gene: lp_2384: Mannose-6-phosphate isomerase (EC 5.3.1.8) |
|
Gene: LGG_00331: Mannose-6-phosphate isomerase (EC 5.3.1.8) |
*
Lactobacillus sakei subsp. sakei 23K Site: position = -99 score = 4.0502 sequence = ACGAAATCGCTTTAAA Gene: LSA1146: Mannose-6-phosphate isomerase (EC 5.3.1.8) |
*
Lactobacillus salivarius subsp. salivarius UCC118 Site: position = -39 score = 4.20269 sequence = TTGAAAGTGTATACAT Gene: LSL_1613: Mannose-6-phosphate isomerase (EC 5.3.1.8) |
|
*
Oenococcus oeni PSU-1 Site: position = -30 score = 4.87146 sequence = ATGATAACGCTTACAT Gene: OEOE_0249: Mannose-6-phosphate isomerase (EC 5.3.1.8) |
*
Pediococcus pentosaceus ATCC 25745 Site: position = -21 score = 4.32483 sequence = ATGAAAGGGGTTTTAT Gene: PEPE_1334: Mannose-6-phosphate isomerase (EC 5.3.1.8) |
Mannose-6-phosphate isomerase (EC 5.3.1.8) |
| CRON 31. | ||||||||||||||||
| ycbA |
|
*
Lactobacillus brevis ATCC 367 Site: position = -65 score = 4.66014 sequence = TAGAAAGCGTTTTCGT Gene: LVIS_2029: Signal transduction histidine kinase |
|
|
|
|
|
|
|
|
|
|
|
|
|
Signal transduction histidine kinase |
| ycbB |
|
Gene: LVIS_2030: Signal transduction response regulator |
|
|
*
Lactobacillus fermentum IFO 3956 Site: position = -82 score = 4.56992 sequence = TAGTAACCGCTTTTAT Gene: LAF_0297: Signal transduction response regulator |
|
|
|
|
|
|
|
|
|
*
Pediococcus pentosaceus ATCC 25745 Site: position = -167 score = 4.94089 sequence = TTTAAAACGTTTTCAT Site: position = -231 score = 4.3252 sequence = TAGCAAGCGCTTTCAC Gene: PEPE_1632: Signal transduction response regulator |
Signal transduction response regulator |
| CRON 32. | ||||||||||||||||
| rafR |
*2
Lactobacillus acidophilus NCFM Site: position = -206 score = 4.96401 sequence = TTTTAAGCGCTTTCAT Gene: LBA1443: Raffinose utilization transcriptional regulator RafR, AraC family Gene: LBA0237: Raffinose utilization transcriptional regulator RafR, AraC family |
|
|
|
|
Gene: lhv_0251: Raffinose utilization transcriptional regulator RafR, AraC family |
*
Lactobacillus johnsonii NCC 533 Site: position = -166 score = 4.21667 sequence = ATGTATACGCTTTATA Site: position = -200 score = 4.62488 sequence = TTGTATTCGCTTTCAA Gene: LJ0259: Raffinose utilization transcriptional regulator RafR, AraC family |
|
|
|
|
|
|
|
*
Pediococcus pentosaceus ATCC 25745 Site: position = -204 score = 4.71982 sequence = TTGTATCCGTTTTCAT Gene: PEPE_0511: Raffinose utilization transcriptional regulator RafR, AraC family |
Raffinose utilization transcriptional regulator RafR, AraC family |
| CRON 33. | ||||||||||||||||
| fmpA |
|
|
*
Lactobacillus casei ATCC 334 Site: position = -200 score = 4.52286 sequence = TTGTAAGCGTTAACCT Gene: LSEI_0559: Predicted mannose specific PTS system, IIA component |
|
|
|
*
Lactobacillus johnsonii NCC 533 Site: position = -82 score = 4.22703 sequence = CAGTAAACGATTACAT Gene: LJ1656: Predicted mannose specific PTS system, IIA component |
|
|
|
|
|
*
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 Site: position = -85 score = 4.97726 sequence = ATGCAAGCGCTTACAT Gene: LEUM_1273: Predicted mannose specific PTS system, IIA component |
*
Oenococcus oeni PSU-1 Site: position = -186 score = 4.63862 sequence = ATGAATTCGTTTTCAA Gene: OEOE_1204: Predicted mannose specific PTS system, IIA component |
|
Predicted mannose specific PTS system, IIA component |
| fmpB |
|
|
Gene: LSEI_0560: Predicted mannose specific PTS system, IIB component |
|
|
|
Gene: LJ1655: Predicted mannose specific PTS system, IIB component |
|
|
|
|
|
Gene: LEUM_1272: Predicted mannose specific PTS system, IIB component |
|
|
Predicted mannose specific PTS system, IIB component |
| fmpC |
|
|
Gene: LSEI_0561: Predicted mannose specific PTS system, IIC component |
|
|
|
Gene: LJ1654: Predicted mannose specific PTS system, IIC component |
|
|
|
|
|
Gene: LEUM_1271: Predicted mannose specific PTS system, IIC component |
|
|
Predicted mannose specific PTS system, IIC component |
| fmpD |
|
|
Gene: LSEI_0562: Predicted mannose specific PTS system, |
|
|
|
Gene: LJ1653: Predicted mannose specific PTS system, |
|
|
|
|
|
Gene: LEUM_1270: Predicted mannose specific PTS system, |
|
|
Predicted mannose specific PTS system, |
| fmpE |
|
|
Gene: LSEI_0563: Predicted mannose specific PTS system, putative EII component |
|
|
|
Gene: LJ1652: Predicted mannose specific PTS system, putative EII component |
|
|
|
|
|
Gene: LEUM_1269: Predicted mannose specific PTS system, putative EII component |
|
|
Predicted mannose specific PTS system, putative EII component |
| CRON 34. | ||||||||||||||||
| pck |
|
|
Gene: LSEI_1820: Phosphoenolpyruvate carboxykinase (EC 4.1.1.49) |
|
|
|
*
Lactobacillus johnsonii NCC 533 Site: position = -38 score = 5.0461 sequence = TTGAAACCGCTTTCTA Gene: LJ0149: Phosphoenolpyruvate carboxykinase (EC 4.1.1.49) |
*
Lactobacillus plantarum WCFS1 Site: position = -68 score = 4.82984 sequence = AAGAAAACGCTTTCTT Gene: lp_3418: Phosphoenolpyruvate carboxykinase (EC 4.1.1.49) |
|
*
Lactobacillus rhamnosus GG Site: position = -85 score = 4.39474 sequence = GTGAAAGCCTTTTCAA Gene: LGG_01876: Phosphoenolpyruvate carboxykinase (EC 4.1.1.49) |
|
*
Lactobacillus salivarius subsp. salivarius UCC118 Site: position = -46 score = 4.42798 sequence = ATGAAAGCGTATTATA Gene: LSL_0395: Phosphoenolpyruvate carboxykinase (EC 4.1.1.49) |
|
|
|
Phosphoenolpyruvate carboxykinase (EC 4.1.1.49) |
| CRON 35. | ||||||||||||||||
| cad |
|
|
*
Lactobacillus casei ATCC 334 Site: position = -115 score = 4.47356 sequence = GAGAAAGCGCTTATAA Gene: LSEI_2296: Predicted pheromone precursor lipoprotein, related to Cad |
|
|
|
|
Gene: lp_1070: Predicted pheromone precursor lipoprotein, related to Cad |
|
*
Lactobacillus rhamnosus GG Site: position = -115 score = 4.47356 sequence = GAGAAAGCGCTTATAA Gene: LGG_02307: Predicted pheromone precursor lipoprotein, related to Cad |
|
|
|
*
Oenococcus oeni PSU-1 Site: position = -101 score = 5.07421 sequence = TTGAAAGCGTTTCCAA Site: position = -237 score = 4.22325 sequence = TTGACACCGGTTTTAT Gene: OEOE_1090: Predicted pheromone precursor lipoprotein, related to Cad |
|
Predicted pheromone precursor lipoprotein, related to Cad |
| CRON 36. | ||||||||||||||||
| pts20B |
|
|
*
Lactobacillus casei ATCC 334 Site: position = -39 score = 4.33052 sequence = CAGAAAACGATTACAT Site: position = -89 score = 4.63348 sequence = TTGAAAACGCTTGTAA Gene: LSEI_2817: PTS system, cellobiose-specific IIB component (EC 2.7.1.69) |
|
|
|
|
*
Lactobacillus plantarum WCFS1 Site: position = -68 score = 4.71096 sequence = ATGAAAGCGGTTTATT Gene: lp_2781: PTS system, cellobiose-specific IIB component (EC 2.7.1.69) |
|
*
Lactobacillus rhamnosus GG Site: position = -91 score = 4.24493 sequence = CTGAAAGCGCTTGTAA Gene: LGG_02823: PTS system, cellobiose-specific IIB component (EC 2.7.1.69) |
|
|
|
*
Oenococcus oeni PSU-1 Site: position = -70 score = 4.78139 sequence = ATGAAAGCGTTTTAAG Gene: OEOE_0338: PTS system, cellobiose-specific IIB component (EC 2.7.1.69) |
*
Pediococcus pentosaceus ATCC 25745 Site: position = -58 score = 4.51777 sequence = TCGTAAGCGGTTTCAT Gene: PEPE_0281: PTS system, cellobiose-specific IIB component (EC 2.7.1.69) |
PTS system, cellobiose-specific IIB component (EC 2.7.1.69) |
| pts20A |
|
|
Gene: LSEI_2818: PTS system, cellobiose-specific IIA component (EC 2.7.1.69) |
|
|
|
|
Gene: lp_2780: PTS system, cellobiose-specific IIA component (EC 2.7.1.69) |
|
Gene: LGG_02824: PTS system, cellobiose-specific IIA component (EC 2.7.1.69) |
|
|
|
Gene: OEOE_0339: PTS system, cellobiose-specific IIA component (EC 2.7.1.69) |
Gene: PEPE_0282: PTS system, cellobiose-specific IIA component (EC 2.7.1.69) |
PTS system, cellobiose-specific IIA component (EC 2.7.1.69) |
| bglA |
*2
Lactobacillus acidophilus NCFM Site: position = -44 score = 4.94784 sequence = ATGCAAACGTTTTCAA Gene: LBA0874: 6-phospho-beta-glucosidase (EC 3.2.1.86) Site: position = -54 score = 4.64725 sequence = TTGCAACCGATTTCAT Gene: LBA0225: 6-phospho-beta-glucosidase (EC 3.2.1.86) |
*
Lactobacillus brevis ATCC 367 Site: position = 61 score = 4.20255 sequence = TTGAAGGCGCTTACGA Gene: LVIS_0465: 6-phospho-beta-glucosidase (EC 3.2.1.86) |
|
|
|
|
*
Lactobacillus johnsonii NCC 533 Site: position = -35 score = 4.31554 sequence = TCGAAAACGCTTACTT Site: position = -132 score = 4.78004 sequence = ATGAAACCGTTTGCAA Gene: LJ0182: 6-phospho-beta-glucosidase (EC 3.2.1.86) |
3
Lactobacillus plantarum WCFS1 Gene: lp_0440: 6-phospho-beta-glucosidase (EC 3.2.1.86) Gene: lp_2778: 6-phospho-beta-glucosidase (EC 3.2.1.86) Gene: lp_2777: 6-phospho-beta-glucosidase (EC 3.2.1.86) |
|
|
|
|
|
2
Oenococcus oeni PSU-1 Gene: OEOE_0340: 6-phospho-beta-glucosidase (EC 3.2.1.86) Gene: OEOE_0341: 6-phospho-beta-glucosidase (EC 3.2.1.86) |
*2
Pediococcus pentosaceus ATCC 25745 Site: position = -51 score = 4.48028 sequence = ATGAAAAGGCTTTCTA Gene: PEPE_0106: 6-phospho-beta-glucosidase (EC 3.2.1.86) Gene: PEPE_0283: 6-phospho-beta-glucosidase (EC 3.2.1.86) |
6-phospho-beta-glucosidase (EC 3.2.1.86) |
| gmuC |
|
|
|
|
|
|
|
*
Lactobacillus plantarum WCFS1 Site: position = -78 score = 5.07835 sequence = TTGTAAGCGCTTTTAA Gene: lp_0439: PTS system, Oligo-beta-mannoside permease IIC component |
|
|
|
|
|
|
|
PTS system, Oligo-beta-mannoside permease IIC component |
| CRON 37. | ||||||||||||||||
| lhv_0924 |
|
|
|
|
|
*
Lactobacillus helveticus DPC 4571 Site: position = -149 score = 4.72204 sequence = TAGGAACCGCTTTCAT Site: position = -236 score = 5.17965 sequence = TTGTAAGCGATTTCAA Gene: lhv_0924: Predicted transcriptional regulator, GntR family |
|
*
Lactobacillus plantarum WCFS1 Site: position = -193 score = 4.22302 sequence = ATGTAGCCGGTTACAT Gene: lp_0152: Predicted transcriptional regulator, GntR family |
|
*
Lactobacillus rhamnosus GG Site: position = -170 score = 4.66226 sequence = TTAAATGCGCTTTCAT Gene: LGG_02679: Predicted transcriptional regulator, GntR family |
|
|
|
*
Oenococcus oeni PSU-1 Site: position = -115 score = 4.0181 sequence = ATGTAAACTCTTTTTT Site: position = -167 score = 4.38974 sequence = ATGAAATCGCTACCAT Gene: OEOE_1211: Predicted transcriptional regulator, GntR family |
*
Pediococcus pentosaceus ATCC 25745 Site: position = -141 score = 4.72837 sequence = TTGAATTCGCTTTCAT Gene: PEPE_1777: Predicted transcriptional regulator, GntR family |
Predicted transcriptional regulator, GntR family |
| CRON 38. | ||||||||||||||||
| simA |
*
Lactobacillus acidophilus NCFM Site: position = -100 score = 4.46352 sequence = GTGAAAGCGAATACAT Gene: LBA1689: Maltose-6'-phosphate glucosidase (EC 3.2.1.122) |
|
*
Lactobacillus casei ATCC 334 Site: position = -105 score = 4.86979 sequence = TTGAAACCGCTTGCAT Gene: LSEI_0369: Maltose-6'-phosphate glucosidase (EC 3.2.1.122) |
|
|
|
*
Lactobacillus johnsonii NCC 533 Site: position = -127 score = 5.17376 sequence = TTGAAAACGCTTTCTT Gene: LJ0635: Maltose-6'-phosphate glucosidase (EC 3.2.1.122) |
|
|
|
|
|
|
|
|
Maltose-6'-phosphate glucosidase (EC 3.2.1.122) |
| CRON 39. | ||||||||||||||||
| lulA |
|
|
*
Lactobacillus casei ATCC 334 Site: position = -30 score = 4.50463 sequence = TTGGAATCGTTTTAAT Site: position = -79 score = 4.60235 sequence = TTATAAACGCTTTCAG Gene: LSEI_2070: Lactate utilization protein A |
|
|
|
|
|
*
Lactobacillus reuteri JCM 1112 Site: position = -115 score = 4.62854 sequence = ATTAAATCGTTTTCAA Gene: LAR_0364: Lactate utilization protein A |
*
Lactobacillus rhamnosus GG Site: position = -79 score = 4.4025 sequence = TTGAAACCGTTTTCGG Gene: LGG_02071: Lactate utilization protein A |
|
*
Lactobacillus salivarius subsp. salivarius UCC118 Site: position = -69 score = 4.4639 sequence = ATGAAAGCGAATTTAA Gene: LSL_1117: Lactate utilization protein A |
|
|
|
Lactate utilization protein A |
| lulC |
|
|
Gene: LSEI_2069: Lactate utilization protein C |
|
|
|
|
|
Gene: LAR_0363: Lactate utilization protein C |
Gene: LGG_02070: Lactate utilization protein C |
|
Gene: LSL_1116: Lactate utilization protein C |
|
|
|
Lactate utilization protein C |
| lulB |
|
|
Gene: LSEI_2068: Lactate utilization protein B |
|
|
|
|
|
Gene: LAR_0362: Lactate utilization protein B |
Gene: LGG_02069: Lactate utilization protein B |
|
Gene: LSL_1115: Lactate utilization protein B |
|
|
|
Lactate utilization protein B |
| CRON 40. | ||||||||||||||||
| pfk |
*
Lactobacillus acidophilus NCFM Site: position = -134 score = 4.16994 sequence = ATGTAAGTGCTAACAT Gene: LBA0956: 6-phosphofructokinase (EC 2.7.1.11) |
|
Gene: LSEI_1364: 6-phosphofructokinase (EC 2.7.1.11) |
Gene: LBUL_0761: 6-phosphofructokinase (EC 2.7.1.11) |
|
*
Lactobacillus helveticus DPC 4571 Site: position = -136 score = 4.16994 sequence = ATGTAAGTGCTAACAT Gene: lhv_1049: 6-phosphofructokinase (EC 2.7.1.11) |
*
Lactobacillus johnsonii NCC 533 Site: position = -132 score = 4.45342 sequence = TTGAAAGCGAAAACAT Gene: LJ1079: 6-phosphofructokinase (EC 2.7.1.11) |
Gene: lp_1898: 6-phosphofructokinase (EC 2.7.1.11) |
|
Gene: LGG_01374: 6-phosphofructokinase (EC 2.7.1.11) |
Gene: LSA1033: 6-phosphofructokinase (EC 2.7.1.11) |
Gene: LSL_0866: 6-phosphofructokinase (EC 2.7.1.11) |
|
|
*
Pediococcus pentosaceus ATCC 25745 Site: position = -116 score = 4.03407 sequence = AATAAAGCACTTACAT Gene: PEPE_1093: 6-phosphofructokinase (EC 2.7.1.11) |
6-phosphofructokinase (EC 2.7.1.11) |
| pyk |
Gene: LBA0957: Pyruvate kinase (EC 2.7.1.40) |
*
Lactobacillus brevis ATCC 367 Site: position = -181 score = 4.11121 sequence = CGGAAAACGCTTACTT Gene: LVIS_0765: Pyruvate kinase (EC 2.7.1.40) |
Gene: LSEI_1365: Pyruvate kinase (EC 2.7.1.40) |
Gene: LBUL_0762: Pyruvate kinase (EC 2.7.1.40) |
*
Lactobacillus fermentum IFO 3956 Site: position = -125 score = 4.51189 sequence = AAGAAACCGTTTACAG Gene: LAF_0868: Pyruvate kinase (EC 2.7.1.40) |
Gene: lhv_1050: Pyruvate kinase (EC 2.7.1.40) |
Gene: LJ1080: Pyruvate kinase (EC 2.7.1.40) |
Gene: lp_1897: Pyruvate kinase (EC 2.7.1.40) |
*
Lactobacillus reuteri JCM 1112 Site: position = -139 score = 4.40483 sequence = ATGATAGCGCTTTTTT Gene: LAR_0722: Pyruvate kinase (EC 2.7.1.40) |
Gene: LGG_01375: Pyruvate kinase (EC 2.7.1.40) |
Gene: LSA1032: Pyruvate kinase (EC 2.7.1.40) |
Gene: LSL_0867: Pyruvate kinase (EC 2.7.1.40) |
*
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 Site: position = -169 score = 4.6486 sequence = GTGAAACCGTTATCAT Gene: LEUM_0775: Pyruvate kinase (EC 2.7.1.40) |
Gene: OEOE_1002: Pyruvate kinase (EC 2.7.1.40) |
Gene: PEPE_1092: Pyruvate kinase (EC 2.7.1.40) |
Pyruvate kinase (EC 2.7.1.40) |
| CRON 41. | ||||||||||||||||
| glclP |
Gene: LBA1478: Beta-glucosides PTS, EIIBCA (EC 2.7.1.69) |
|
|
|
|
|
Gene: LJ1261: Beta-glucosides PTS, EIIBCA (EC 2.7.1.69) |
*2
Lactobacillus plantarum WCFS1 Site: position = -246 score = 4.08051 sequence = TTGTAACGGCTTTCAC Gene: lp_3229: Beta-glucosides PTS, EIIBCA (EC 2.7.1.69) Site: position = -137 score = 4.56555 sequence = ATGTAAAGGCTTACAT Gene: lp_3133: Beta-glucosides PTS, EIIBCA (EC 2.7.1.69) |
|
|
|
|
|
|
|
Beta-glucosides PTS, EIIBCA (EC 2.7.1.69) |
| bglA2 |
|
|
|
|
|
|
|
Gene: lp_3132: Beta-glucosidase (EC 3.2.1.21); 6-phospho-beta-glucosidase (EC 3.2.1.86) |
|
|
|
|
|
|
|
Beta-glucosidase (EC 3.2.1.21); 6-phospho-beta-glucosidase (EC 3.2.1.86) |
| glcT |
*
Lactobacillus acidophilus NCFM Site: position = -138 score = 4.6773 sequence = TTGCAATCGCTTACAT Gene: LBA1479: Beta-glucoside bgl operon antiterminator, BglG family |
|
|
|
|
|
*
Lactobacillus johnsonii NCC 533 Site: position = -143 score = 4.63679 sequence = TTGCAATCGTTTACAT Gene: LJ1262: Beta-glucoside bgl operon antiterminator, BglG family |
Gene: lp_3131: Beta-glucoside bgl operon antiterminator, BglG family |
|
|
|
|
|
|
|
Beta-glucoside bgl operon antiterminator, BglG family |
| CRON 42. | ||||||||||||||||
| dhaT |
|
*
Lactobacillus brevis ATCC 367 Site: position = -191 score = 4.62245 sequence = TTGAAAGCGGTAAAAA Gene: LVIS_2191: 1,3-propanediol dehydrogenase (EC 1.1.1.202) |
|
|
*
Lactobacillus fermentum IFO 3956 Site: position = -39 score = 4.73471 sequence = ATGGAAGCGTATTCAA Gene: LAF_0741: 1,3-propanediol dehydrogenase (EC 1.1.1.202) |
|
|
*
Lactobacillus plantarum WCFS1 Site: position = -36 score = 4.69489 sequence = ATGATAGCGATTACAA Gene: lp_3051: 1,3-propanediol dehydrogenase (EC 1.1.1.202) |
*
Lactobacillus reuteri JCM 1112 Site: position = -39 score = 4.3855 sequence = ATGGAATCGTATTCAA Gene: LAR_0029: 1,3-propanediol dehydrogenase (EC 1.1.1.202) |
|
*
Lactobacillus sakei subsp. sakei 23K Site: position = -55 score = 4.10994 sequence = CGGTAAGCGTTATCAT Site: position = -147 score = 4.22425 sequence = TTTGTAACGCTTTCAT Gene: LSA0122: 1,3-propanediol dehydrogenase (EC 1.1.1.202) |
|
|
Gene: OEOE_1336: 1,3-propanediol dehydrogenase (EC 1.1.1.202) |
*
Pediococcus pentosaceus ATCC 25745 Site: position = -15 score = 4.03251 sequence = AAGAAGGCGTTTAAAA Site: position = -71 score = 4.6895 sequence = TTGTAAACGGATACAT Site: position = -104 score = 4.06607 sequence = ATAAAAACGTTTAACT Gene: PEPE_0276: 1,3-propanediol dehydrogenase (EC 1.1.1.202) |
1,3-propanediol dehydrogenase (EC 1.1.1.202) |
| CRON 43. | ||||||||||||||||
| adhX |
|
Gene: LVIS_0911: Zn conatining alcohol dehydrogenase |
|
|
*
Lactobacillus fermentum IFO 3956 Site: position = -31 score = 4.63546 sequence = ATGTAAGCGCTACCAA Gene: LAF_0797: Zn conatining alcohol dehydrogenase |
|
|
*
Lactobacillus plantarum WCFS1 Site: position = -41 score = 4.48743 sequence = TTGTAAGCGGTTTACA Site: position = -85 score = 4.64395 sequence = TTGTAAGCGCTTGAAT Gene: lp_3054: Zn conatining alcohol dehydrogenase |
Gene: LAR_1480: Zn conatining alcohol dehydrogenase |
Gene: LGG_02693: Zn conatining alcohol dehydrogenase |
*
Lactobacillus sakei subsp. sakei 23K Site: position = -66 score = 4.29847 sequence = TTGTAAACGATTCTAA Gene: LSA0542: Zn conatining alcohol dehydrogenase |
*
Lactobacillus salivarius subsp. salivarius UCC118 Site: position = -31 score = 4.41529 sequence = TTGTAAACGATGTCAA Gene: LSL_1748: Zn conatining alcohol dehydrogenase |
|
|
*
Pediococcus pentosaceus ATCC 25745 Site: position = -75 score = 4.75164 sequence = TTGCAAACGCTTTCTT Gene: PEPE_0182: Zn conatining alcohol dehydrogenase |
Zn conatining alcohol dehydrogenase |
| CRON 44. | ||||||||||||||||
| adhE |
*
Lactobacillus acidophilus NCFM Site: position = -161 score = 4.34868 sequence = AAGCAAGCGCTTCCAT Gene: LBA0461: Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10) |
*
Lactobacillus brevis ATCC 367 Site: position = -173 score = 4.40225 sequence = CTGTATGCGCTTACAT Gene: LVIS_0119: Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10) |
Gene: LSEI_0775: Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10) |
Gene: LBUL_1581: Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10) |
*
Lactobacillus fermentum IFO 3956 Site: position = -197 score = 4.66994 sequence = TTGAAAACGCTTTCTC Gene: LAF_0277: Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10) |
|
*
Lactobacillus johnsonii NCC 533 Site: position = -162 score = 4.49292 sequence = ATGTAACCGATAACAT Gene: LJ1766: Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10) |
Gene: lp_3662: Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10) |
*
Lactobacillus reuteri JCM 1112 Site: position = -132 score = 4.77364 sequence = TTGTAAGCGAATTCAT Gene: LAR_0310: Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10) |
Gene: LGG_00757: Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10) |
*
Lactobacillus sakei subsp. sakei 23K Site: position = -74 score = 4.45874 sequence = TTACAAACGGTTTCAA Gene: LSA0379: Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10) |
|
|
|
|
Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10) |
| CRON 45. | ||||||||||||||||
| gabD |
*
Lactobacillus acidophilus NCFM Site: position = -66 score = 4.73415 sequence = TTGTAAACGCTTTATA Gene: LBA1632: Succinate-semialdehyde dehydrogenase [NAD] (EC 1.2.1.24); Succinate-semialdehyde dehydrogenase [NADP+] (EC 1.2.1.16) |
*
Lactobacillus brevis ATCC 367 Site: position = -150 score = 4.86287 sequence = TTGAAAACGGTTAAAT Gene: LVIS_0323: Succinate-semialdehyde dehydrogenase [NAD] (EC 1.2.1.24); Succinate-semialdehyde dehydrogenase [NADP+] (EC 1.2.1.16) |
*
Lactobacillus casei ATCC 334 Site: position = -18 score = 4.06294 sequence = AAGGGAGCGTTTTCAA Gene: LSEI_2278: Succinate-semialdehyde dehydrogenase [NAD] (EC 1.2.1.24); Succinate-semialdehyde dehydrogenase [NADP+] (EC 1.2.1.16) |
|
*
Lactobacillus fermentum IFO 3956 Site: position = -62 score = 4.25868 sequence = GAAAAAGCGGTTACAA Gene: LAF_0045: Succinate-semialdehyde dehydrogenase [NAD] (EC 1.2.1.24); Succinate-semialdehyde dehydrogenase [NADP+] (EC 1.2.1.16) |
Gene: lhv_1739: Succinate-semialdehyde dehydrogenase [NAD] (EC 1.2.1.24); Succinate-semialdehyde dehydrogenase [NADP+] (EC 1.2.1.16) |
*
Lactobacillus johnsonii NCC 533 Site: position = -44 score = 4.57982 sequence = AAGAAAGCGCTTTATA Gene: LJ0671: Succinate-semialdehyde dehydrogenase [NAD] (EC 1.2.1.24); Succinate-semialdehyde dehydrogenase [NADP+] (EC 1.2.1.16) |
*
Lactobacillus plantarum WCFS1 Site: position = -45 score = 4.00146 sequence = GATTAACCGTTTACAA Gene: lp_3092: Succinate-semialdehyde dehydrogenase [NAD] (EC 1.2.1.24); Succinate-semialdehyde dehydrogenase [NADP+] (EC 1.2.1.16) |
*
Lactobacillus reuteri JCM 1112 Site: position = -30 score = 4.60545 sequence = ATGTAAGCGTTTATTT Site: position = -132 score = 4.07303 sequence = ATAAAAGGGCTTTTAT Gene: LAR_0033: Succinate-semialdehyde dehydrogenase [NAD] (EC 1.2.1.24); Succinate-semialdehyde dehydrogenase [NADP+] (EC 1.2.1.16) |
Gene: LGG_02286: Succinate-semialdehyde dehydrogenase [NAD] (EC 1.2.1.24); Succinate-semialdehyde dehydrogenase [NADP+] (EC 1.2.1.16) |
|
*
Lactobacillus salivarius subsp. salivarius UCC118 Site: position = -37 score = 4.26831 sequence = ATGTAAGCGTACTCAA Gene: LSL_1298: Succinate-semialdehyde dehydrogenase [NAD] (EC 1.2.1.24); Succinate-semialdehyde dehydrogenase [NADP+] (EC 1.2.1.16) |
2
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 Gene: LEUM_0488: Succinate-semialdehyde dehydrogenase [NAD] (EC 1.2.1.24); Succinate-semialdehyde dehydrogenase [NADP+] (EC 1.2.1.16) Gene: LEUM_1090: Succinate-semialdehyde dehydrogenase [NAD] (EC 1.2.1.24); Succinate-semialdehyde dehydrogenase [NADP+] (EC 1.2.1.16) |
Gene: OEOE_1299: Succinate-semialdehyde dehydrogenase [NAD] (EC 1.2.1.24); Succinate-semialdehyde dehydrogenase [NADP+] (EC 1.2.1.16) |
*
Pediococcus pentosaceus ATCC 25745 Site: position = -55 score = 4.7641 sequence = ATGAAAGCGTATTCTT Gene: PEPE_1821: Succinate-semialdehyde dehydrogenase [NAD] (EC 1.2.1.24); Succinate-semialdehyde dehydrogenase [NADP+] (EC 1.2.1.16) |
Succinate-semialdehyde dehydrogenase [NAD] (EC 1.2.1.24); Succinate-semialdehyde dehydrogenase [NADP+] (EC 1.2.1.16) |
| CRON 46. | ||||||||||||||||
| gntP |
|
*
Lactobacillus brevis ATCC 367 Site: position = -19 score = 4.46919 sequence = ATGAAAGGGCTTACTT Gene: LVIS_1586: H+/gluconate symporter related permease |
*
Lactobacillus casei ATCC 334 Site: position = -43 score = 4.89369 sequence = TTGTAAGCGATTTCTT Gene: LSEI_0229: H+/gluconate symporter related permease |
|
|
|
|
Gene: lp_1249: H+/gluconate symporter related permease |
|
*
Lactobacillus rhamnosus GG Site: position = -194 score = 4.6543 sequence = TTGTAAGCGGTTTCTG Gene: LGG_00277: H+/gluconate symporter related permease |
*
Lactobacillus sakei subsp. sakei 23K Site: position = -36 score = 4.47726 sequence = ATGTAAACGCAAACAA Gene: LSA0299: H+/gluconate symporter related permease |
|
|
|
*
Pediococcus pentosaceus ATCC 25745 Site: position = -35 score = 4.65523 sequence = AAGAAAGCGGTTACTT Gene: PEPE_1360: H+/gluconate symporter related permease |
H+/gluconate symporter related permease |
| CRON 47. | ||||||||||||||||
| LEUM_1316 |
|
|
|
|
|
|
|
|
|
|
|
|
*
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 Site: position = -77 score = 4.76468 sequence = AGGTAAGCGTTTACAT Gene: LEUM_1316: Beta-galactosidase (EC 3.2.1.23) |
|
|
Beta-galactosidase (EC 3.2.1.23) |
| yghZ |
|
Gene: LVIS_0677: Predicted oxidoreductase, aryl-alcohol dehydrogenase related |
|
|
Gene: LAF_1186: Predicted oxidoreductase, aryl-alcohol dehydrogenase related |
|
|
*
Lactobacillus plantarum WCFS1 Site: position = -49 score = 4.62337 sequence = ATGAAAGCGGTAACTT Gene: lp_3489: Predicted oxidoreductase, aryl-alcohol dehydrogenase related |
|
|
*
Lactobacillus sakei subsp. sakei 23K Site: position = -45 score = 4.45438 sequence = ATGTAACCGATTGCAT Gene: LSA0260: Predicted oxidoreductase, aryl-alcohol dehydrogenase related |
|
Gene: LEUM_1315: Predicted oxidoreductase, aryl-alcohol dehydrogenase related |
Gene: OEOE_0157: Predicted oxidoreductase, aryl-alcohol dehydrogenase related |
*
Pediococcus pentosaceus ATCC 25745 Site: position = -45 score = 4.72056 sequence = ATGAAAGCGGTATCTT Gene: PEPE_0112: Predicted oxidoreductase, aryl-alcohol dehydrogenase related |
Predicted oxidoreductase, aryl-alcohol dehydrogenase related |
| CRON 48. | ||||||||||||||||
| lacS |
|
|
|
Gene: LBUL_1115: Lactose and galactose permease |
|
|
*
Lactobacillus johnsonii NCC 533 Site: position = -70 score = 4.22914 sequence = TATAAAGCGTATACAT Site: position = -36 score = 4.77994 sequence = TTGAAAGCGAATACAA Gene: LJ0260: Lactose and galactose permease |
|
|
|
|
|
*
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 Site: position = -53 score = 5.11342 sequence = ATGAAAGCGCTTACTA Gene: LEUM_0880: Lactose and galactose permease |
|
*
Pediococcus pentosaceus ATCC 25745 Site: position = -46 score = 4.74374 sequence = ATGAAAACGGATACAA Gene: PEPE_0512: Lactose and galactose permease |
Lactose and galactose permease |
| CRON 49. | ||||||||||||||||
| LVIS_0438 |
|
*
Lactobacillus brevis ATCC 367 Site: position = -75 score = 4.32682 sequence = AGGAAAACGTTTACCA Site: position = -97 score = 4.20243 sequence = ATGAAAGCGTTTGACA Gene: LVIS_0438: Hypothetical protein |
|
|
|
|
|
|
|
|
|
|
*
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 Site: position = -76 score = 5.09278 sequence = TTGGAAGCGTTTACAA Gene: LEUM_0499: Hypothetical protein |
Gene: OEOE_0127: Hypothetical protein |
|
Hypothetical protein |
| LVIS_0439 |
|
Gene: LVIS_0439: Sugar phosphate isomerase/epimerase |
|
|
|
|
|
*
Lactobacillus plantarum WCFS1 Site: position = -190 score = 5.0642 sequence = AAGAAAGCGTTTACAA Gene: lp_3566: Sugar phosphate isomerase/epimerase |
|
|
|
|
Gene: LEUM_0500: Sugar phosphate isomerase/epimerase |
*2
Oenococcus oeni PSU-1 Site: position = -58 score = 4.80811 sequence = GAGAAAACGTTTTCAT Gene: OEOE_1669: Sugar phosphate isomerase/epimerase Gene: OEOE_0128: Sugar phosphate isomerase/epimerase |
|
Sugar phosphate isomerase/epimerase |
| LVIS_0440 |
|
Gene: LVIS_0440: H+/gluconate symporter related permease |
|
|
|
|
|
|
|
|
|
|
Gene: LEUM_0501: H+/gluconate symporter related permease |
2
Oenococcus oeni PSU-1 Gene: OEOE_1670: H+/gluconate symporter related permease Gene: OEOE_0129: H+/gluconate symporter related permease |
|
H+/gluconate symporter related permease |
| LVIS_0441 |
|
Gene: LVIS_0441: 2-dehydro-3-deoxygluconokinase |
|
|
|
|
|
|
|
|
|
|
Gene: LEUM_0502: 2-dehydro-3-deoxygluconokinase |
Gene: OEOE_0130: 2-dehydro-3-deoxygluconokinase |
|
2-dehydro-3-deoxygluconokinase |
| CRON 50. | ||||||||||||||||
| ptsH |
*
Lactobacillus acidophilus NCFM Site: position = -111 score = 4.40731 sequence = ATGTAAACTGTTACAT Gene: LBA0639: Phosphotransferase system, HPr-related protein |
Gene: LVIS_1552: Phosphotransferase system, HPr-related protein |
Gene: LSEI_1760: Phosphotransferase system, HPr-related protein |
*
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 Site: position = -108 score = 4.68044 sequence = ATGAAAACATTTACAA Gene: LBUL_0512: Phosphotransferase system, HPr-related protein |
Gene: LAF_1386: Phosphotransferase system, HPr-related protein |
*
Lactobacillus helveticus DPC 4571 Site: position = -109 score = 4.39426 sequence = ATGTAAGCTATTACAT Gene: lhv_0686: Phosphotransferase system, HPr-related protein |
*
Lactobacillus johnsonii NCC 533 Site: position = -109 score = 4.57695 sequence = ATGTAAACATTTACAT Gene: LJ0816: Phosphotransferase system, HPr-related protein |
*
Lactobacillus plantarum WCFS1 Site: position = -135 score = 4.0261 sequence = ATGAAAGGGCTTGTAT Gene: lp_1273: Phosphotransferase system, HPr-related protein |
*
Lactobacillus reuteri JCM 1112 Site: position = -102 score = 4.04425 sequence = TATTTAACGCTTACAA Gene: LAR_1256: Phosphotransferase system, HPr-related protein |
Gene: LGG_01821: Phosphotransferase system, HPr-related protein |
Gene: LSA1463: Phosphotransferase system, HPr-related protein |
*
Lactobacillus salivarius subsp. salivarius UCC118 Site: position = -68 score = 4.19741 sequence = ATGTAAACGTGTTCTT Site: position = -91 score = 4.14855 sequence = TTGTTATCGTTTGCAT Gene: LSL_0388: Phosphotransferase system, HPr-related protein |
*
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 Site: position = -63 score = 4.6856 sequence = TTGTAAGCGCTTTGAT Site: position = -157 score = 5.26647 sequence = ATGTAAACGTTTTCAT Gene: LEUM_1780: Phosphotransferase system, HPr-related protein |
|
*
Pediococcus pentosaceus ATCC 25745 Site: position = -127 score = 4.00064 sequence = ATGTAAGGGCTTGCTT Gene: PEPE_0609: Phosphotransferase system, HPr-related protein |
Phosphotransferase system, HPr-related protein |
| ptsI |
Gene: LBA0640: Phosphoenolpyruvate-protein kinase, PTS system component (EC 2.7.3.9) |
Gene: LVIS_1551: Phosphoenolpyruvate-protein kinase, PTS system component (EC 2.7.3.9) |
Gene: LSEI_1759: Phosphoenolpyruvate-protein kinase, PTS system component (EC 2.7.3.9) |
Gene: LBUL_0513: Phosphoenolpyruvate-protein kinase, PTS system component (EC 2.7.3.9) |
*2
Lactobacillus fermentum IFO 3956 Site: position = -73 score = 4.18305 sequence = ATGATAACGGTTTATA Site: position = -119 score = 4.27768 sequence = TTTGAACCGGTTACAT Gene: LAF_1735: Phosphoenolpyruvate-protein kinase, PTS system component (EC 2.7.3.9) Gene: LAF_1385: Phosphoenolpyruvate-protein kinase, PTS system component (EC 2.7.3.9) |
Gene: lhv_0687: Phosphoenolpyruvate-protein kinase, PTS system component (EC 2.7.3.9) |
Gene: LJ0817: Phosphoenolpyruvate-protein kinase, PTS system component (EC 2.7.3.9) |
Gene: lp_1274: Phosphoenolpyruvate-protein kinase, PTS system component (EC 2.7.3.9) |
2
Lactobacillus reuteri JCM 1112 Gene: LAR_1255: Phosphoenolpyruvate-protein kinase, PTS system component (EC 2.7.3.9) Gene: LAR_0447: Phosphoenolpyruvate-protein kinase, PTS system component (EC 2.7.3.9) |
Gene: LGG_01820: Phosphoenolpyruvate-protein kinase, PTS system component (EC 2.7.3.9) |
Gene: LSA1462: Phosphoenolpyruvate-protein kinase, PTS system component (EC 2.7.3.9) |
Gene: LSL_0389: Phosphoenolpyruvate-protein kinase, PTS system component (EC 2.7.3.9) |
Gene: LEUM_1779: Phosphoenolpyruvate-protein kinase, PTS system component (EC 2.7.3.9) |
*
Oenococcus oeni PSU-1 Site: position = -82 score = 4.5471 sequence = TTGAAAACGATTTTTT Site: position = -164 score = 4.70385 sequence = TTGAAAACAGTTTCAA Gene: OEOE_0647: Phosphoenolpyruvate-protein kinase, PTS system component (EC 2.7.3.9) |
Gene: PEPE_0610: Phosphoenolpyruvate-protein kinase, PTS system component (EC 2.7.3.9) |
Phosphoenolpyruvate-protein kinase, PTS system component (EC 2.7.3.9) |
| CRON 51. | ||||||||||||||||
| scrB |
*
Lactobacillus acidophilus NCFM Site: position = -31 score = 4.5768 sequence = AAGATAACGCTTACAT Site: position = -188 score = 4.52214 sequence = ATGATAACGTATTCAA Site: position = -220 score = 4.943 sequence = ATGTAAACGCTTTTAT Gene: LBA0400: Sucrose-6-phosphate hydrolase (EC 3.2.1.26) |
|
Gene: LSEI_2104: Sucrose-6-phosphate hydrolase (EC 3.2.1.26) |
|
Gene: LAF_1580: Sucrose-6-phosphate hydrolase (EC 3.2.1.26) |
|
*
Lactobacillus johnsonii NCC 533 Site: position = -37 score = 4.59597 sequence = AAGAATGCGTTTACAT Site: position = -184 score = 4.32229 sequence = ATGATAGCGTATTCTA Site: position = -214 score = 4.74928 sequence = GTGTAAGCGTTTTAAA Gene: LJ0518: Sucrose-6-phosphate hydrolase (EC 3.2.1.26) |
*
Lactobacillus plantarum WCFS1 Site: position = -59 score = 4.5984 sequence = GTGTAAGCGGTTTTAT Site: position = -213 score = 4.28307 sequence = ATGCAAGCGCTTTACA Gene: lp_0187: Sucrose-6-phosphate hydrolase (EC 3.2.1.26) |
|
Gene: LGG_02107: Sucrose-6-phosphate hydrolase (EC 3.2.1.26) |
*
Lactobacillus sakei subsp. sakei 23K Site: position = -59 score = 4.12692 sequence = TATCAAACGTTTACAT Site: position = -163 score = 4.30766 sequence = ATACAACCGTTTACAT Site: position = -188 score = 4.537 sequence = TTGTAAACGCTTTTCA Gene: LSA1793: Sucrose-6-phosphate hydrolase (EC 3.2.1.26) |
*
Lactobacillus salivarius subsp. salivarius UCC118 Site: position = -33 score = 4.50987 sequence = AAGAATACGTTTACAA Site: position = -121 score = 4.05107 sequence = ATTTAACCGCTTTTTT Gene: LSL_0065: Sucrose-6-phosphate hydrolase (EC 3.2.1.26) |
|
|
*
Pediococcus pentosaceus ATCC 25745 Site: position = -59 score = 4.5984 sequence = GTGTAAGCGGTTTTAT Site: position = -213 score = 4.28307 sequence = ATGCAAGCGCTTTACA Gene: PEPE_0519: Sucrose-6-phosphate hydrolase (EC 3.2.1.26) |
Sucrose-6-phosphate hydrolase (EC 3.2.1.26) |
| scrR |
Gene: LBA0399: Sucrose operon repressor ScrR, LacI family |
|
|
Gene: LBUL_1639: Sucrose operon repressor ScrR, LacI family |
|
|
Gene: LJ0517: Sucrose operon repressor ScrR, LacI family |
Gene: lp_0188: Sucrose operon repressor ScrR, LacI family |
|
|
Gene: LSA1794: Sucrose operon repressor ScrR, LacI family |
Gene: LSL_0064: Sucrose operon repressor ScrR, LacI family |
|
|
Gene: PEPE_0520: Sucrose operon repressor ScrR, LacI family |
Sucrose operon repressor ScrR, LacI family |
| agl4 |
|
|
|
|
|
|
|
Gene: lp_0189: Oligo-1,6-glucosidase (EC 3.2.1.10) |
|
Gene: LGG_02696: Oligo-1,6-glucosidase (EC 3.2.1.10) |
|
|
|
|
Gene: PEPE_0521: Oligo-1,6-glucosidase (EC 3.2.1.10) |
Oligo-1,6-glucosidase (EC 3.2.1.10) |
| CRON 52. | ||||||||||||||||
| bglB |
*
Lactobacillus acidophilus NCFM Site: position = -35 score = 4.79815 sequence = ATGAAAGCGATTACAG Gene: LBA0885: Beta-glucosidase (EC 3.2.1.21); 6-phospho-beta-glucosidase (EC 3.2.1.86) |
|
|
|
|
*
Lactobacillus helveticus DPC 4571 Site: position = -34 score = 4.0431 sequence = CTGAAAGCACTTACAG Gene: lhv_0941: Beta-glucosidase (EC 3.2.1.21); 6-phospho-beta-glucosidase (EC 3.2.1.86) |
*
Lactobacillus johnsonii NCC 533 Site: position = -28 score = 4.66814 sequence = ATGTAAGCGATTGCAA Gene: LJ0194: Beta-glucosidase (EC 3.2.1.21); 6-phospho-beta-glucosidase (EC 3.2.1.86) |
*
Lactobacillus plantarum WCFS1 Site: position = -43 score = 4.51011 sequence = AGGAAAGCGTTTTCCA Gene: lp_3011: Beta-glucosidase (EC 3.2.1.21); 6-phospho-beta-glucosidase (EC 3.2.1.86) |
|
|
|
|
|
*
Oenococcus oeni PSU-1 Site: position = -93 score = 4.47673 sequence = ATGGTAGCGATTTCAT Gene: OEOE_1210: Beta-glucosidase (EC 3.2.1.21); 6-phospho-beta-glucosidase (EC 3.2.1.86) |
*
Pediococcus pentosaceus ATCC 25745 Site: position = -34 score = 4.82788 sequence = ATGAAAGCGAATTCAA Gene: PEPE_1776: Beta-glucosidase (EC 3.2.1.21); 6-phospho-beta-glucosidase (EC 3.2.1.86) |
Beta-glucosidase (EC 3.2.1.21); 6-phospho-beta-glucosidase (EC 3.2.1.86) |
| LBA0884 |
Gene: LBA0884: PTS system, IIC component |
|
|
|
|
|
Gene: LJ0193: PTS system, IIC component |
Gene: lp_3010: PTS system, IIC component |
|
|
|
|
|
|
Gene: PEPE_1775: PTS system, IIC component |
PTS system, IIC component |
| CRON 53. | ||||||||||||||||
| pepQ |
*
Lactobacillus acidophilus NCFM Site: position = -85 score = 4.56135 sequence = TTGCAAACGTTTACAG Gene: LBA0430: Xaa-Pro dipeptidase (EC 3.4.13.9) |
*
Lactobacillus brevis ATCC 367 Site: position = -103 score = 4.86871 sequence = TTGAAAACGTTTTCGA Gene: LVIS_1204: Xaa-Pro dipeptidase (EC 3.4.13.9) |
*
Lactobacillus casei ATCC 334 Site: position = -229 score = 4.24257 sequence = ATGCAAGCGTTTTACT Gene: LSEI_0808: Xaa-Pro dipeptidase (EC 3.4.13.9) |
*2
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 Site: position = -89 score = 4.02233 sequence = GTGCAATCGCTTACAG Gene: LBUL_1474: Xaa-Pro dipeptidase (EC 3.4.13.9) Gene: LBUL_1575: Xaa-Pro dipeptidase (EC 3.4.13.9) |
Gene: LAF_0538: Xaa-Pro dipeptidase (EC 3.4.13.9) |
*
Lactobacillus helveticus DPC 4571 Site: position = -86 score = 4.58348 sequence = GTGCAAACGTTTACAT Gene: lhv_0456: Xaa-Pro dipeptidase (EC 3.4.13.9) |
*
Lactobacillus johnsonii NCC 533 Site: position = -85 score = 4.22174 sequence = TTGCAACCGTTTACGA Gene: LJ0490: Xaa-Pro dipeptidase (EC 3.4.13.9) |
*
Lactobacillus plantarum WCFS1 Site: position = -158 score = 5.1966 sequence = TTGAAATCGCTTTCAT Gene: lp_2258: Xaa-Pro dipeptidase (EC 3.4.13.9) |
Gene: LAR_0535: Xaa-Pro dipeptidase (EC 3.4.13.9) |
Gene: LGG_00792: Xaa-Pro dipeptidase (EC 3.4.13.9) |
*
Lactobacillus sakei subsp. sakei 23K Site: position = -120 score = 4.11954 sequence = ATGCAAGCGGTTTACA Gene: LSA0414: Xaa-Pro dipeptidase (EC 3.4.13.9) |
*
Lactobacillus salivarius subsp. salivarius UCC118 Site: position = -125 score = 4.03002 sequence = TTGCAAGCGTTTCATA Gene: LSL_0419: Xaa-Pro dipeptidase (EC 3.4.13.9) |
*
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 Site: position = -102 score = 4.18707 sequence = TTATAAGTGTTTTCAT Site: position = -124 score = 4.9404 sequence = TTGCAAACGCTTACAA Gene: LEUM_0543: Xaa-Pro dipeptidase (EC 3.4.13.9) |
Gene: OEOE_0574: Xaa-Pro dipeptidase (EC 3.4.13.9) |
*
Pediococcus pentosaceus ATCC 25745 Site: position = -109 score = 4.5752 sequence = ATGAATACGTTATCAA Gene: PEPE_1251: Xaa-Pro dipeptidase (EC 3.4.13.9) |
Xaa-Pro dipeptidase (EC 3.4.13.9) |
| CRON 54. | ||||||||||||||||
| ackB |
*
Lactobacillus acidophilus NCFM Site: position = -72 score = 4.37867 sequence = ATGAAAGCGCTATACT Gene: LBA1873: Acetate kinase (EC 2.7.2.1) |
|
|
|
|
*
Lactobacillus helveticus DPC 4571 Site: position = -178 score = 4.54797 sequence = ATGAAAGCGCTATATT Gene: lhv_2003: Acetate kinase (EC 2.7.2.1) |
*
Lactobacillus johnsonii NCC 533 Site: position = -68 score = 4.37867 sequence = ATGAAAGCGCTATACT Gene: LJ0485: Acetate kinase (EC 2.7.2.1) |
|
|
|
|
|
|
|
|
Acetate kinase (EC 2.7.2.1) |
| CRON 55. | ||||||||||||||||
| scrA |
*
Lactobacillus acidophilus NCFM Site: position = -30 score = 4.94355 sequence = ATAAAAGCGTTTACAT Site: position = -219 score = 4.7401 sequence = ATGTAAGCGTTATCTT Gene: LBA0401: Sucrose-specific PTS system, IIABC component (EC 2.7.1.69) |
|
|
|
*
Lactobacillus fermentum IFO 3956 Site: position = -57 score = 4.49335 sequence = AGAAAAGCGCTTACAA Site: position = -126 score = 4.3865 sequence = TTGGCAGCGATTTCAA Gene: LAF_1578: Sucrose-specific PTS system, IIABC component (EC 2.7.1.69) |
|
*
Lactobacillus johnsonii NCC 533 Site: position = -37 score = 4.38039 sequence = TTTAAAACGCTTACAC Site: position = -214 score = 4.61502 sequence = ATGTAAACGCATTCTT Gene: LJ0519: Sucrose-specific PTS system, IIABC component (EC 2.7.1.69) |
*
Lactobacillus plantarum WCFS1 Site: position = -58 score = 4.11455 sequence = TGTAAAGCGCTTGCAT Site: position = -157 score = 4.00407 sequence = ATGTCAGCGTTTCAAA Site: position = -212 score = 4.26646 sequence = ATAAAACCGCTTACAC Gene: lp_0185: Sucrose-specific PTS system, IIABC component (EC 2.7.1.69) |
|
|
*
Lactobacillus sakei subsp. sakei 23K Site: position = -54 score = 4.50209 sequence = TGAAAAGCGTTTACAA Site: position = -183 score = 4.18214 sequence = ATGTAAACGTTTGATA Gene: LSA1792: Sucrose-specific PTS system, IIABC component (EC 2.7.1.69) |
*
Lactobacillus salivarius subsp. salivarius UCC118 Site: position = -52 score = 4.15418 sequence = CATTAAGCGTTTTCAA Gene: LSL_0066: Sucrose-specific PTS system, IIABC component (EC 2.7.1.69) |
|
|
*
Pediococcus pentosaceus ATCC 25745 Site: position = -58 score = 4.11455 sequence = TGTAAAGCGCTTGCAT Site: position = -157 score = 4.00407 sequence = ATGTCAGCGTTTCAAA Site: position = -212 score = 4.26646 sequence = ATAAAACCGCTTACAC Gene: PEPE_0518: Sucrose-specific PTS system, IIABC component (EC 2.7.1.69) |
Sucrose-specific PTS system, IIABC component (EC 2.7.1.69) |
| CRON 56. | ||||||||||||||||
| lacL |
*
Lactobacillus acidophilus NCFM Site: position = -47 score = 5.04073 sequence = ATAAAAGCGTTTTCAA Gene: LBA1467: Beta-galactosidase large subunit (EC 3.2.1.23) |
*
Lactobacillus brevis ATCC 367 Site: position = -32 score = 4.46332 sequence = GTGTAAGCGTTTTATA Gene: LVIS_2259: Beta-galactosidase large subunit (EC 3.2.1.23) |
|
Gene: LBUL_1114: Beta-galactosidase large subunit (EC 3.2.1.23) / Beta-galactosidase small subunit (EC 3.2.1.23) |
*
Lactobacillus fermentum IFO 3956 Site: position = -48 score = 4.96502 sequence = TTGAAACCGTTATCAT Gene: LAF_0247: Beta-galactosidase large subunit (EC 3.2.1.23) |
*
Lactobacillus helveticus DPC 4571 Site: position = -46 score = 4.44229 sequence = ATAAAAGCTCTTTCAA Gene: lhv_1549: Beta-galactosidase large subunit (EC 3.2.1.23) |
*
Lactobacillus johnsonii NCC 533 Site: position = -45 score = 4.35076 sequence = ATAAAAGCGTCTTCAA Gene: LJ0855: Beta-galactosidase large subunit (EC 3.2.1.23) |
*
Lactobacillus plantarum WCFS1 Site: position = -43 score = 5.03784 sequence = TTGTAAGCGTTTTTAT Gene: lp_3483: Beta-galactosidase large subunit (EC 3.2.1.23) |
*
Lactobacillus reuteri JCM 1112 Site: position = -53 score = 4.37867 sequence = ATGAAAGCGCTATACT Gene: LAR_0276: Beta-galactosidase large subunit (EC 3.2.1.23) |
|
*
Lactobacillus sakei subsp. sakei 23K Site: position = -37 score = 4.90617 sequence = ATGAAACCGTTTTAAT Gene: LSA1711: Beta-galactosidase large subunit (EC 3.2.1.23) |
*
Lactobacillus salivarius subsp. salivarius UCC118 Site: position = -32 score = 4.47429 sequence = ATGTAAGCATTTTCTT Gene: LSL_0376: Beta-galactosidase large subunit (EC 3.2.1.23) / Beta-galactosidase small subunit (EC 3.2.1.23) |
|
|
*
Pediococcus pentosaceus ATCC 25745 Site: position = -41 score = 4.77975 sequence = TTGTAAGCGTTTTATA Gene: PEPE_0205: Beta-galactosidase large subunit (EC 3.2.1.23) |
Beta-galactosidase large subunit (EC 3.2.1.23) |
| lacM |
Gene: LBA1468: Beta-galactosidase small subunit (EC 3.2.1.23) |
Gene: LVIS_2258: Beta-galactosidase small subunit (EC 3.2.1.23) |
|
|
Gene: LAF_0248: Beta-galactosidase small subunit (EC 3.2.1.23) |
Gene: lhv_1550: Beta-galactosidase small subunit (EC 3.2.1.23) |
Gene: LJ0854: Beta-galactosidase small subunit (EC 3.2.1.23) |
Gene: lp_3484: Beta-galactosidase small subunit (EC 3.2.1.23) |
Gene: LAR_0277: Beta-galactosidase small subunit (EC 3.2.1.23) |
|
Gene: LSA1710: Beta-galactosidase small subunit (EC 3.2.1.23) |
|
|
|
Gene: PEPE_0204: Beta-galactosidase small subunit (EC 3.2.1.23) |
Beta-galactosidase small subunit (EC 3.2.1.23) |
| CRON 57. | ||||||||||||||||
| treP |
*
Lactobacillus acidophilus NCFM Site: position = -29 score = 4.78839 sequence = ATGAAAACGCTTTATA Site: position = -96 score = 4.31001 sequence = TTGTGATCGCTTTCAA Gene: LBA1012: Trehalose-specific PTS system, EIIABC component (EC 2.7.1.69) |
|
Gene: LSEI_0631: Trehalose-specific PTS system, EIIABC component (EC 2.7.1.69) |
|
|
|
*
Lactobacillus johnsonii NCC 533 Site: position = -36 score = 4.54389 sequence = ATGAAAGCGGATACTT Site: position = -104 score = 4.41896 sequence = AAGTAAGCTTTTTCAT Gene: LJ0760: Trehalose-specific PTS system, EIIABC component (EC 2.7.1.69) |
*3
Lactobacillus plantarum WCFS1 Site: position = -118 score = 4.83792 sequence = AAGAAAGCGCTTTTAT Gene: lp_3240: Trehalose-specific PTS system, EIIABC component (EC 2.7.1.69) Gene: lp_0264: Trehalose-specific PTS system, EIIABC component (EC 2.7.1.69) Gene: lp_0265: Trehalose-specific PTS system, EIIABC component (EC 2.7.1.69) |
|
Gene: LGG_00603: Trehalose-specific PTS system, EIIABC component (EC 2.7.1.69) |
*
Lactobacillus sakei subsp. sakei 23K Site: position = -105 score = 4.42548 sequence = TTGTAAACGGTTCAAA Gene: LSA1200: Trehalose-specific PTS system, EIIABC component (EC 2.7.1.69) |
*
Lactobacillus salivarius subsp. salivarius UCC118 Site: position = -27 score = 4.09251 sequence = AAGAAAAGGTTTTCAG Site: position = -96 score = 4.50122 sequence = TTGTAAACAATTTCAT Gene: LSL_1512: Trehalose-specific PTS system, EIIABC component (EC 2.7.1.69) |
*2
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 Site: position = -86 score = 5.09087 sequence = TTGTAACCGTTTACAT Gene: LEUM_0507: Trehalose-specific PTS system, EIIABC component (EC 2.7.1.69) Gene: LEUM_0508: Trehalose-specific PTS system, EIIABC component (EC 2.7.1.69) |
*2
Oenococcus oeni PSU-1 Site: position = -96 score = 4.49909 sequence = TTGAAAACGCTTTATG Gene: OEOE_1342: Trehalose-specific PTS system, EIIABC component (EC 2.7.1.69) Gene: OEOE_1341: Trehalose-specific PTS system, EIIABC component (EC 2.7.1.69) |
*
Pediococcus pentosaceus ATCC 25745 Site: position = -56 score = 4.73184 sequence = TAGCAAGCGCTTACAA Site: position = -199 score = 4.63186 sequence = TTAGAAACGCTTACAT Gene: PEPE_1804: Trehalose-specific PTS system, EIIABC component (EC 2.7.1.69) |
Trehalose-specific PTS system, EIIABC component (EC 2.7.1.69) |
| treA |
Gene: LBA1014: Trehalose-6-phosphate hydrolase (EC 3.2.1.93) |
|
Gene: LSEI_0630: Trehalose-6-phosphate hydrolase (EC 3.2.1.93) |
|
|
|
Gene: LJ0758: Trehalose-6-phosphate hydrolase (EC 3.2.1.93) |
Gene: lp_0263: Trehalose-6-phosphate hydrolase (EC 3.2.1.93) |
|
Gene: LGG_00602: Trehalose-6-phosphate hydrolase (EC 3.2.1.93) |
Gene: LSA1199: Trehalose-6-phosphate hydrolase (EC 3.2.1.93) |
Gene: LSL_1514: Trehalose-6-phosphate hydrolase (EC 3.2.1.93) |
Gene: LEUM_0509: Trehalose-6-phosphate hydrolase (EC 3.2.1.93) |
Gene: OEOE_1340: Trehalose-6-phosphate hydrolase (EC 3.2.1.93) |
Gene: PEPE_1806: Trehalose-6-phosphate hydrolase (EC 3.2.1.93) |
Trehalose-6-phosphate hydrolase (EC 3.2.1.93) |
| treR |
*
Lactobacillus acidophilus NCFM Site: position = -102 score = 4.50769 sequence = TTGAAAGCGATCACAA Site: position = -169 score = 4.73233 sequence = TATAAAGCGTTTTCAT Gene: LBA1013: Trehalose utilization transcriptional regulator TreR, GntR family |
|
*
Lactobacillus casei ATCC 334 Site: position = -27 score = 4.34222 sequence = GTGAAAGCGATTTCTG Site: position = -90 score = 4.15285 sequence = TTAAAAGCGTTTAAAC Gene: LSEI_0629: Trehalose utilization transcriptional regulator TreR, GntR family |
|
|
|
*
Lactobacillus johnsonii NCC 533 Site: position = 4 score = 4.41641 sequence = AAGTATCCGCTTTCAT Gene: LJ0759: Trehalose utilization transcriptional regulator TreR, GntR family |
*
Lactobacillus plantarum WCFS1 Site: position = -29 score = 4.72407 sequence = ATGAAAACGATAACAA Gene: lp_0262: Trehalose utilization transcriptional regulator TreR, GntR family |
|
*
Lactobacillus rhamnosus GG Site: position = -27 score = 4.25808 sequence = GTGAAAACGGTTACTG Gene: LGG_00601: Trehalose utilization transcriptional regulator TreR, GntR family |
*
Lactobacillus sakei subsp. sakei 23K Site: position = -82 score = 4.4007 sequence = TTTGAACCGTTTACAA Site: position = -145 score = 4.18957 sequence = GTAAAAGCGCTTTCTG Gene: LSA1201: Trehalose utilization transcriptional regulator TreR, GntR family |
*
Lactobacillus salivarius subsp. salivarius UCC118 Site: position = -130 score = 4.21023 sequence = ATGAAATTGTTTACAA Gene: LSL_1513: Trehalose utilization transcriptional regulator TreR, GntR family |
Gene: LEUM_0510: Trehalose utilization transcriptional regulator TreR, GntR family |
*
Oenococcus oeni PSU-1 Site: position = -122 score = 4.08137 sequence = TTGAAAACGAAAACTT Site: position = -66 score = 4.51318 sequence = TGAAAAACGTTTTCAA Gene: OEOE_1339: Trehalose utilization transcriptional regulator TreR, GntR family |
*
Pediococcus pentosaceus ATCC 25745 Site: position = -34 score = 4.5575 sequence = ATGTAAGCGTTTCTAA Site: position = -177 score = 4.69412 sequence = TTGTAAGCGCTTGCTA Gene: PEPE_1805: Trehalose utilization transcriptional regulator TreR, GntR family |
Trehalose utilization transcriptional regulator TreR, GntR family |
| CRON 58. | ||||||||||||||||
| lacZ |
Gene: LBA1462: Beta-galactosidase (EC 3.2.1.23) |
|
|
|
*
Lactobacillus fermentum IFO 3956 Site: position = -92 score = 4.16856 sequence = TCGTAATCGGTTTCAT Gene: LAF_0780: Beta-galactosidase (EC 3.2.1.23) |
|
Gene: LJ0858: Beta-galactosidase (EC 3.2.1.23) |
*
Lactobacillus plantarum WCFS1 Site: position = -66 score = 4.58015 sequence = ATGAAAGCGCTTATCA Site: position = -177 score = 4.16925 sequence = AATAATACGCTTTCAT Gene: lp_3469: Beta-galactosidase (EC 3.2.1.23) |
Gene: LAR_1032: Beta-galactosidase (EC 3.2.1.23) |
|
|
|
*
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 Site: position = -80 score = 4.53658 sequence = CTGTAAGCGCTTCCAT Gene: LEUM_1064: Beta-galactosidase (EC 3.2.1.23) |
|
|
Beta-galactosidase (EC 3.2.1.23) |
| lacS |
Gene: LBA1463: Lactose and galactose permease, GPH translocator family |
|
|
|
Gene: LAF_0779: Lactose and galactose permease, GPH translocator family |
*
Lactobacillus helveticus DPC 4571 Site: position = -41 score = 4.57727 sequence = GTGTAAGCGATTTCTA Gene: lhv_1543: Lactose and galactose permease, GPH translocator family |
Gene: LJ0857: Lactose and galactose permease, GPH translocator family |
Gene: lp_3468: Lactose and galactose permease, GPH translocator family |
*
Lactobacillus reuteri JCM 1112 Site: position = -42 score = 4.74392 sequence = TTGTAAGCGATTACAG Gene: LAR_1033: Lactose and galactose permease, GPH translocator family |
|
|
|
Gene: LEUM_1065: Lactose and galactose permease, GPH translocator family |
|
|
Lactose and galactose permease, GPH translocator family |
| CRON 59. | ||||||||||||||||
| lp_0827 |
Gene: LBA0433: Conserved hypothetical protein |
*
Lactobacillus brevis ATCC 367 Site: position = -166 score = 4.86733 sequence = TTGACAGCGCTTACAA Gene: LVIS_0695: Conserved hypothetical protein |
Gene: LSEI_0815: Conserved hypothetical protein |
Gene: LBUL_1472: Conserved hypothetical protein |
*
Lactobacillus fermentum IFO 3956 Site: position = -179 score = 4.86733 sequence = TTGACAGCGCTTACAA Gene: LAF_0383: Conserved hypothetical protein |
Gene: lhv_0459: Conserved hypothetical protein |
Gene: LJ0495: Conserved hypothetical protein |
Gene: lp_0827: Conserved hypothetical protein |
*
Lactobacillus reuteri JCM 1112 Site: position = -149 score = 4.7686 sequence = ATGGAAACGCTATCAT Gene: LAR_0406: Conserved hypothetical protein |
Gene: LGG_00800: Conserved hypothetical protein |
*
Lactobacillus sakei subsp. sakei 23K Site: position = -174 score = 4.78123 sequence = TTGACAACGCTTACAT Gene: LSA0428: Conserved hypothetical protein |
*
Lactobacillus salivarius subsp. salivarius UCC118 Site: position = -200 score = 4.31502 sequence = TTGACACCGCTTACAG Gene: LSL_1300: Conserved hypothetical protein |
Gene: LEUM_0534: Conserved hypothetical protein |
Gene: OEOE_1654: Conserved hypothetical protein |
*
Pediococcus pentosaceus ATCC 25745 Site: position = -181 score = 5.0753 sequence = TTGTAAGCGTTATCAT Gene: PEPE_0479: Conserved hypothetical protein |
Conserved hypothetical protein |
| CRON 60. | ||||||||||||||||
| rbsK |
*2
Lactobacillus acidophilus NCFM Site: position = -61 score = 4.0718 sequence = TTGGATGCGTTTTTTT Gene: LBA0587: Ribokinase (EC 2.7.1.15) Site: position = -101 score = 4.68212 sequence = TTGAAAGCGATTACAC Gene: LBA1485: Ribokinase (EC 2.7.1.15) |
Gene: LVIS_1421: Ribokinase (EC 2.7.1.15) |
|
Gene: LBUL_0470: Ribokinase (EC 2.7.1.15) |
*3
Lactobacillus fermentum IFO 3956 Site: position = -91 score = 4.27366 sequence = TTGTAACCGGTTTACA Gene: LAF_1689: Ribokinase (EC 2.7.1.15) Site: position = -158 score = 4.28067 sequence = TAGCAAACGCTTGCAT Site: position = -103 score = 4.45468 sequence = TTGCAACCGCTTTCCT Gene: LAF_1738: Ribokinase (EC 2.7.1.15) Site: position = -103 score = 4.45468 sequence = TTGCAACCGCTTTCCT Site: position = -158 score = 4.28067 sequence = TAGCAAACGCTTGCAT Gene: LAF_1738: Ribokinase (EC 2.7.1.15) |
Gene: lhv_0611: Ribokinase (EC 2.7.1.15) |
Gene: LJ0797: Ribokinase (EC 2.7.1.15) |
*2
Lactobacillus plantarum WCFS1 Site: position = -72 score = 4.89164 sequence = ATTAAAACGTTTTCAT Gene: lp_3660: Ribokinase (EC 2.7.1.15) Gene: lp_0500: Ribokinase (EC 2.7.1.15) |
*3
Lactobacillus reuteri JCM 1112 Site: position = -135 score = 4.37711 sequence = TGAAAAGCGATTTCAA Site: position = -76 score = 4.50079 sequence = TTGTAATCACTTTCAA Gene: LAR_0399: Ribokinase (EC 2.7.1.15) Gene: LAR_1218: Ribokinase (EC 2.7.1.15) Site: position = -76 score = 4.50079 sequence = TTGTAATCACTTTCAA Site: position = -135 score = 4.37711 sequence = TGAAAAGCGATTTCAA Gene: LAR_0399: Ribokinase (EC 2.7.1.15) |
Gene: LGG_00373: Ribokinase (EC 2.7.1.15) |
Gene: LSA0202: Ribokinase (EC 2.7.1.15) |
Gene: LSL_0423: Ribokinase (EC 2.7.1.15) |
Gene: LEUM_0794: Ribokinase (EC 2.7.1.15) |
*2
Oenococcus oeni PSU-1 Site: position = -19 score = 4.86738 sequence = TTGAAAACACTTTCAA Gene: OEOE_1612: Ribokinase (EC 2.7.1.15) Site: position = -19 score = 4.86738 sequence = TTGAAAACACTTTCAA Gene: OEOE_1612: Ribokinase (EC 2.7.1.15) |
*
Pediococcus pentosaceus ATCC 25745 Site: position = -65 score = 4.89164 sequence = ATTAAAACGTTTTCAT Gene: PEPE_1699: Ribokinase (EC 2.7.1.15) |
Ribokinase (EC 2.7.1.15) |
| rbsD |
Gene: LBA1484: Ribose ABC transport system, high affinity permease RbsD (TC 3.A.1.2.1) |
*
Lactobacillus brevis ATCC 367 Site: position = -199 score = 4.31206 sequence = TTGTAAGCCCTTTAAT Gene: LVIS_1589: Ribose ABC transport system, high affinity permease RbsD (TC 3.A.1.2.1) |
Gene: LSEI_0307: Ribose ABC transport system, high affinity permease RbsD (TC 3.A.1.2.1) |
|
Gene: LAF_1737: Ribose ABC transport system, high affinity permease RbsD (TC 3.A.1.2.1) |
|
Gene: LJ1214: Ribose ABC transport system, high affinity permease RbsD (TC 3.A.1.2.1) |
Gene: lp_3659: Ribose ABC transport system, high affinity permease RbsD (TC 3.A.1.2.1) |
Gene: LAR_0400: Ribose ABC transport system, high affinity permease RbsD (TC 3.A.1.2.1) |
|
Gene: LSA0201: Ribose ABC transport system, high affinity permease RbsD (TC 3.A.1.2.1) |
|
|
Gene: OEOE_1613: Ribose ABC transport system, high affinity permease RbsD (TC 3.A.1.2.1) |
Gene: PEPE_1698: Ribose ABC transport system, high affinity permease RbsD (TC 3.A.1.2.1) |
Ribose ABC transport system, high affinity permease RbsD (TC 3.A.1.2.1) |
| rbsA |
Gene: LBA1483: Ribose ABC transport system, ATP-binding protein RbsA (TC 3.A.1.2.1) |
|
Gene: LSEI_0308: Ribose ABC transport system, ATP-binding protein RbsA (TC 3.A.1.2.1) |
|
|
|
|
|
|
|
|
|
|
|
|
Ribose ABC transport system, ATP-binding protein RbsA (TC 3.A.1.2.1) |
| rbsC |
Gene: LBA1482: Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1) |
|
Gene: LSEI_0309: Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1) |
|
|
|
|
|
|
|
|
|
|
|
|
Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1) |
| rbsB |
Gene: LBA1481: Ribose ABC transport system, periplasmic ribose-binding protein RbsB (TC 3.A.1.2.1) |
|
Gene: LSEI_0310: Ribose ABC transport system, periplasmic ribose-binding protein RbsB (TC 3.A.1.2.1) |
|
|
|
|
|
|
|
|
|
|
|
|
Ribose ABC transport system, periplasmic ribose-binding protein RbsB (TC 3.A.1.2.1) |
| rbsR |
|
Gene: LVIS_1422: Ribose operon transcriptional regulator, LacI family |
*
Lactobacillus casei ATCC 334 Site: position = -88 score = 4.53343 sequence = TTGACAGCGCTTCCAA Gene: LSEI_0306: Ribose operon transcriptional regulator, LacI family |
|
Gene: LAF_1343: Ribose operon transcriptional regulator, LacI family |
|
|
Gene: lp_3661: Ribose operon transcriptional regulator, LacI family |
Gene: LAR_1219: Ribose operon transcriptional regulator, LacI family |
*
Lactobacillus rhamnosus GG Site: position = -89 score = 4.53343 sequence = TTGACAGCGCTTCCAT Gene: LGG_00372: Ribose operon transcriptional regulator, LacI family |
Gene: LSA0203: Ribose operon transcriptional regulator, LacI family |
|
*
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 Site: position = -76 score = 5.14072 sequence = ATGGAAGCGTTTTCAA Gene: LEUM_0795: Ribose operon transcriptional regulator, LacI family |
*
Oenococcus oeni PSU-1 Site: position = -45 score = 4.64105 sequence = TTGTAAACGTTTTAAG Gene: OEOE_0146: Ribose operon transcriptional regulator, LacI family |
*
Pediococcus pentosaceus ATCC 25745 Site: position = -140 score = 4.21798 sequence = ATATAAGCGTTTAATT Gene: PEPE_1700: Ribose operon transcriptional regulator, LacI family |
Ribose operon transcriptional regulator, LacI family |
| rbsU |
|
|
|
|
|
|
Gene: LJ1213: Ribose uptake protein RbsU (TC 2.A.7.5) |
Gene: lp_3658: Ribose uptake protein RbsU (TC 2.A.7.5) |
|
|
*
Lactobacillus sakei subsp. sakei 23K Site: position = -114 score = 4.32253 sequence = TGTAAACCGTTTTCAA Gene: LSA0200: Ribose uptake protein RbsU (TC 2.A.7.5) |
|
|
|
Gene: PEPE_1697: Ribose uptake protein RbsU (TC 2.A.7.5) |
Ribose uptake protein RbsU (TC 2.A.7.5) |
| rbsD |
|
|
|
|
Gene: LAF_1737: Ribose ABC transport system, high affinity permease RbsD (TC 3.A.1.2.1) |
|
|
|
Gene: LAR_0400: Ribose ABC transport system, high affinity permease RbsD (TC 3.A.1.2.1) |
|
|
|
|
Gene: OEOE_1613: Ribose ABC transport system, high affinity permease RbsD (TC 3.A.1.2.1) |
|
Ribose ABC transport system, high affinity permease RbsD (TC 3.A.1.2.1) |
| rbsP |
|
Gene: LVIS_1588: Predicted ribose permease |
|
|
Gene: LAF_1736: Predicted ribose permease |
|
|
*
Lactobacillus plantarum WCFS1 Site: position = -30 score = 4.77819 sequence = AAGAAAGCGCTAACAT Gene: lp_0498: Predicted ribose permease |
Gene: LAR_0401: Predicted ribose permease |
|
|
|
|
Gene: OEOE_1614: Predicted ribose permease |
|
Predicted ribose permease |
| rpiA |
Gene: LBA0588: Ribose 5-phosphate isomerase A (EC 5.3.1.6) |
Gene: LVIS_0574: Ribose 5-phosphate isomerase A (EC 5.3.1.6) |
2
Lactobacillus casei ATCC 334 Gene: LSEI_2675: Ribose 5-phosphate isomerase A (EC 5.3.1.6) Gene: LSEI_2315: Ribose 5-phosphate isomerase A (EC 5.3.1.6) |
Gene: LBUL_0472: Ribose 5-phosphate isomerase A (EC 5.3.1.6) |
Gene: LAF_1725: Ribose 5-phosphate isomerase A (EC 5.3.1.6) |
Gene: lhv_0612: Ribose 5-phosphate isomerase A (EC 5.3.1.6) |
Gene: LJ0798: Ribose 5-phosphate isomerase A (EC 5.3.1.6) |
2
Lactobacillus plantarum WCFS1 Gene: lp_0602: Ribose 5-phosphate isomerase A (EC 5.3.1.6) Gene: lp_0354: Ribose 5-phosphate isomerase A (EC 5.3.1.6) |
Gene: LAR_0286: Ribose 5-phosphate isomerase A (EC 5.3.1.6) |
Gene: LGG_02699: Ribose 5-phosphate isomerase A (EC 5.3.1.6) |
*
Lactobacillus sakei subsp. sakei 23K Site: position = -65 score = 4.41757 sequence = TTTAAAGCGCTTTTTT Gene: LSA1685: Ribose 5-phosphate isomerase A (EC 5.3.1.6) |
*2
Lactobacillus salivarius subsp. salivarius UCC118 Site: position = -18 score = 4.07541 sequence = TTGAAAGGGGTATAAT Gene: LSL_1806: Ribose 5-phosphate isomerase A (EC 5.3.1.6) Gene: LSL_1439: Ribose 5-phosphate isomerase A (EC 5.3.1.6) |
3
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 Gene: LEUM_0154: Ribose 5-phosphate isomerase A (EC 5.3.1.6) Gene: LEUM_0793: Ribose 5-phosphate isomerase A (EC 5.3.1.6) Gene: LEUM_0630: Ribose 5-phosphate isomerase A (EC 5.3.1.6) |
*2
Oenococcus oeni PSU-1 Site: position = -110 score = 4.70588 sequence = TTGAAAGTGTTTTCAA Gene: OEOE_1611: Ribose 5-phosphate isomerase A (EC 5.3.1.6) Gene: OEOE_0159: Ribose 5-phosphate isomerase A (EC 5.3.1.6) |
Gene: PEPE_1506: Ribose 5-phosphate isomerase A (EC 5.3.1.6) |
Ribose 5-phosphate isomerase A (EC 5.3.1.6) |
| LAF_1741 |
|
|
|
|
|
|
|
Gene: lp_0499: Hypothetical protein |
|
|
|
|
|
|
|
Hypothetical protein |
| rpe |
|
|
|
|
|
|
|
|
|
|
|
Gene: LSL_1807: Ribulose-phosphate 3-epimerase (EC 5.1.3.1) |
|
|
|
Ribulose-phosphate 3-epimerase (EC 5.1.3.1) |
| CRON 61. | ||||||||||||||||
| ldh |
*
Lactobacillus acidophilus NCFM Site: position = -205 score = 3.83644 sequence = ATGAAACCAGTATTAT Gene: LBA0271: L-lactate dehydrogenase (EC 1.1.1.27) |
|
*2
Lactobacillus casei ATCC 334 Site: position = -140 score = 4.48064 sequence = ATGAAATCGGATACAT Gene: LSEI_0634: L-lactate dehydrogenase (EC 1.1.1.27) Site: position = -193 score = 4.02203 sequence = CTGGAAACGCTTACGT Gene: LSEI_2549: L-lactate dehydrogenase (EC 1.1.1.27) |
|
|
Gene: lhv_0289: L-lactate dehydrogenase (EC 1.1.1.27) |
Gene: LJ0274: L-lactate dehydrogenase (EC 1.1.1.27) |
|
|
*2
Lactobacillus rhamnosus GG Site: position = -94 score = 4.48064 sequence = ATGAAATCGGATACAT Gene: LGG_00606: L-lactate dehydrogenase 1 (L-LDH 1) Site: position = -193 score = 4.4355 sequence = TTGCAAGCGTTTACGT Gene: LGG_02523: L-lactate dehydrogenase (EC 1.1.1.27) |
Gene: LSA1606: L-lactate dehydrogenase (EC 1.1.1.27) |
|
|
|
|
L-lactate dehydrogenase (EC 1.1.1.27) |
| CRON 62. | ||||||||||||||||
| arcB |
|
|
|
|
*
Lactobacillus fermentum IFO 3956 Site: position = -65 score = 4.7115 sequence = TTGAAAACGCTTGCTA Gene: LAF_0298: Ornithine carbamoyltransferase (EC 2.1.3.3) |
|
|
|
*
Lactobacillus reuteri JCM 1112 Site: position = -144 score = 4.22133 sequence = TTGTTTCCGCTTACAT Gene: LAR_0419: Ornithine carbamoyltransferase (EC 2.1.3.3) |
|
|
|
|
|
*
Pediococcus pentosaceus ATCC 25745 Site: position = -119 score = 5.03383 sequence = ATGAAAACGTTTTAAA Site: position = -55 score = 4.48118 sequence = GTGAAAGCGCTTGCTA Gene: PEPE_1631: Ornithine carbamoyltransferase (EC 2.1.3.3) |
Ornithine carbamoyltransferase (EC 2.1.3.3) |
| arcC |
|
|
|
|
Gene: LAF_0299: Carbamate kinase (EC 2.7.2.2) |
|
|
|
Gene: LAR_0420: Carbamate kinase (EC 2.7.2.2) |
|
|
|
|
|
Gene: PEPE_1630: Carbamate kinase (EC 2.7.2.2) |
Carbamate kinase (EC 2.7.2.2) |
| arcA |
|
|
|
|
Gene: LAF_0300: Arginine deiminase (EC 3.5.3.6) |
|
|
|
*
Lactobacillus reuteri JCM 1112 Site: position = -72 score = 4.74073 sequence = TTGACAACGTTTACAT Gene: LAR_0435: Arginine deiminase (EC 3.5.3.6) |
|
|
|
|
|
Gene: PEPE_1629: Arginine deiminase (EC 3.5.3.6) |
Arginine deiminase (EC 3.5.3.6) |
| arcD |
|
|
|
|
Gene: LAF_0301: Arginine/ornithine antiporter ArcD |
|
|
|
Gene: LAR_0437: Arginine/ornithine antiporter ArcD |
|
|
|
|
|
Gene: PEPE_1628: Arginine/ornithine antiporter ArcD |
Arginine/ornithine antiporter ArcD |
| argR |
|
|
|
|
*
Lactobacillus fermentum IFO 3956 Site: position = -119 score = 4.78315 sequence = ATGAAACCGGTTTAAA Gene: LAF_1823: Arginine metabolism regulator ArgR |
|
|
Gene: lp_1411: Arginine metabolism regulator ArgR |
Gene: LAR_0436: Arginine metabolism regulator ArgR |
|
|
Gene: LSL_0233: Arginine metabolism regulator ArgR |
|
|
Gene: PEPE_0671: Arginine metabolism regulator ArgR |
Arginine metabolism regulator ArgR |
| CRON 63. | ||||||||||||||||
| scrT |
|
|
|
|
|
|
|
|
*
Lactobacillus reuteri JCM 1112 Site: position = -190 score = 3.97773 sequence = AAAATAGCGTTATCAT Site: position = -133 score = 4.03977 sequence = ATGTAATGGATTACAA Gene: LAR_1453: Predicted sucrose permease |
|
|
|
*
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 Site: position = -54 score = 4.43957 sequence = GTGGAACCGGTTACAA Site: position = -137 score = 4.12872 sequence = ATGATAATGTTTTCAT Gene: LEUM_0383: Predicted sucrose permease |
Gene: OEOE_0134: Predicted sucrose permease |
|
Predicted sucrose permease |
| scrP |
|
|
|
|
|
|
|
|
Gene: LAR_1452: Sucrose phosphorylase (EC 2.4.1.7) |
|
|
|
Gene: LEUM_0384: Sucrose phosphorylase (EC 2.4.1.7) |
Gene: OEOE_1779: Sucrose phosphorylase (EC 2.4.1.7) |
|
Sucrose phosphorylase (EC 2.4.1.7) |
| CRON 64. | ||||||||||||||||
| yxjF |
|
|
*
Lactobacillus casei ATCC 334 Site: position = -98 score = 4.6688 sequence = TTGAAAGCGCTATCGT Gene: LSEI_0715: Predicted short-chain alcohol dehydrogenase |
|
|
|
|
*
Lactobacillus plantarum WCFS1 Site: position = -96 score = 4.3718 sequence = ATGAAAGCGTAGTCAA Gene: lp_0060: Predicted short-chain alcohol dehydrogenase |
|
*
Lactobacillus rhamnosus GG Site: position = -106 score = 4.6688 sequence = TTGAAAGCGCTATCGT Gene: LGG_00704: Predicted short-chain alcohol dehydrogenase |
|
|
|
|
|
Predicted short-chain alcohol dehydrogenase |
| adc |
|
|
Gene: LSEI_0716: Probable acetoacetate decarboxylase |
|
|
|
|
Gene: lp_0061: Probable acetoacetate decarboxylase |
|
Gene: LGG_00705: Probable acetoacetate decarboxylase |
|
*
Lactobacillus salivarius subsp. salivarius UCC118 Site: position = -140 score = 4.25412 sequence = TAGTAATCGTTTTCAC Site: position = -33 score = 5.03383 sequence = ATGAAAACGTTTTAAA Gene: LSL_0135: Probable acetoacetate decarboxylase |
|
|
|
Probable acetoacetate decarboxylase |
| ydgI |
|
|
Gene: LSEI_0717: Putative NAD(P)H nitroreductase |
|
|
|
*
Lactobacillus johnsonii NCC 533 Site: position = -35 score = 4.60539 sequence = ATGTAAGCGCTAATAA Gene: LJ1256: Putative NAD(P)H nitroreductase |
*2
Lactobacillus plantarum WCFS1 Gene: lp_0062: Putative NAD(P)H nitroreductase Site: position = -99 score = 4.79208 sequence = ATGATAGCGATTTCAA Gene: lp_2968: Putative NAD(P)H nitroreductase |
|
Gene: LGG_00706: Putative NAD(P)H nitroreductase |
|
*
Lactobacillus salivarius subsp. salivarius UCC118 Site: position = -150 score = 4.94089 sequence = TTTAAAACGTTTTCAT Site: position = -43 score = 4.49747 sequence = GTGAAAACGATTACTA Gene: LSL_0134: Putative NAD(P)H nitroreductase |
|
|
|
Putative NAD(P)H nitroreductase |
| mmgB |
|
Gene: LVIS_0594: 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157); 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) |
|
|
*
Lactobacillus fermentum IFO 3956 Site: position = -65 score = 5.4192 sequence = TTGAAAACGTTTTCAT Site: position = -111 score = 4.64654 sequence = TTGAAAACGATTTCGT Gene: LAF_0998: 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157); 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) |
|
|
|
|
|
|
Gene: LSL_0136: 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157); 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) |
|
|
|
3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157); 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) |
| CRON 65. | ||||||||||||||||
| lacX |
|
Gene: LVIS_0140: Aldose 1-epimerase |
*
Lactobacillus casei ATCC 334 Site: position = -36 score = 4.48658 sequence = TTGAATGCGTTTTCGT Gene: LSEI_2598: Aldose 1-epimerase |
|
|
|
*
Lactobacillus johnsonii NCC 533 Site: position = -84 score = 4.16633 sequence = ATGTTATCGCTTACAG Gene: LJ0171: Aldose 1-epimerase |
|
|
*
Lactobacillus rhamnosus GG Site: position = -36 score = 4.70187 sequence = ATGAATGCGTTTTCTT Gene: LGG_02577: Aldose 1-epimerase |
|
|
|
|
*
Pediococcus pentosaceus ATCC 25745 Site: position = -76 score = 4.27006 sequence = AAGAAAGCCTTTACAT Gene: PEPE_1763: Aldose 1-epimerase |
Aldose 1-epimerase |
| CRON 66. | ||||||||||||||||
| pgi |
*
Lactobacillus acidophilus NCFM Site: position = -90 score = 4.29999 sequence = GTGAATGCGCTTATAA Gene: LBA0752: Glucose-6-phosphate isomerase (EC 5.3.1.9) |
Gene: LVIS_1312: Glucose-6-phosphate isomerase (EC 5.3.1.9) |
*
Lactobacillus casei ATCC 334 Site: position = -62 score = 4.01222 sequence = ATGAAACCACTCTCAT Gene: LSEI_1126: Glucose-6-phosphate isomerase (EC 5.3.1.9) |
Gene: LBUL_0625: Glucose-6-phosphate isomerase (EC 5.3.1.9) |
*2
Lactobacillus fermentum IFO 3956 Site: position = -66 score = 4.1776 sequence = ATGGAAACGTTATCGT Gene: LAF_0411: Glucose-6-phosphate isomerase (EC 5.3.1.9) Site: position = -63 score = 4.38942 sequence = GAGTTAGCGCTTTCAT Gene: LAF_1686: Glucose-6-phosphate isomerase (EC 5.3.1.9) |
*
Lactobacillus helveticus DPC 4571 Site: position = -14 score = 4.00229 sequence = TAGGAAGCGGATTTAT Gene: lhv_0795: Glucose-6-phosphate isomerase (EC 5.3.1.9) |
Gene: LJ0924: Glucose-6-phosphate isomerase (EC 5.3.1.9) |
*
Lactobacillus plantarum WCFS1 Site: position = -77 score = 3.80015 sequence = GAGGAAGCGCTTTTCA Gene: lp_2502: Glucose-6-phosphate isomerase (EC 5.3.1.9) |
*
Lactobacillus reuteri JCM 1112 Site: position = -69 score = 4.37939 sequence = TTGAAACCGACTTCAT Gene: LAR_0415: Glucose-6-phosphate isomerase (EC 5.3.1.9) |
Gene: LGG_01085: Glucose-6-phosphate isomerase (EC 5.3.1.9) |
Gene: LSA1179: Glucose-6-phosphate isomerase (EC 5.3.1.9) |
Gene: LSL_0464: Glucose-6-phosphate isomerase (EC 5.3.1.9) |
*
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 Site: position = -37 score = 4.96588 sequence = TTGTAACCGATTTCAT Gene: LEUM_0355: Glucose-6-phosphate isomerase (EC 5.3.1.9) |
*
Oenococcus oeni PSU-1 Site: position = -118 score = 3.89775 sequence = TTGGAAGCTATTCCAA Gene: OEOE_0636: Glucose-6-phosphate isomerase (EC 5.3.1.9) |
Gene: PEPE_1350: Glucose-6-phosphate isomerase (EC 5.3.1.9) |
Glucose-6-phosphate isomerase (EC 5.3.1.9) |
| CRON 67. | ||||||||||||||||
| hcaD |
*
Lactobacillus acidophilus NCFM Site: position = -52 score = 4.43642 sequence = ATGAAAGAGGTTACAA Gene: LBA1401: NADH peroxidase (EC 1.11.1.1) |
Gene: LVIS_B09: NADH peroxidase (EC 1.11.1.1) |
Gene: LSEI_0397: NADH peroxidase (EC 1.11.1.1) |
|
Gene: LAF_1460: NADH peroxidase (EC 1.11.1.1) |
|
|
*2
Lactobacillus plantarum WCFS1 Site: position = -200 score = 4.30144 sequence = TTGTAACCGTTTTAGT Gene: lp_2544: NADH peroxidase (EC 1.11.1.1) Gene: lp_1445: NADH peroxidase (EC 1.11.1.1) |
|
Gene: LGG_00491: NADH peroxidase (EC 1.11.1.1) |
Gene: LSA0575: NADH peroxidase (EC 1.11.1.1) |
*
Lactobacillus salivarius subsp. salivarius UCC118 Site: position = -56 score = 3.80245 sequence = GTGAAAACGTTCTATA Gene: LSL_0137: NADH peroxidase (EC 1.11.1.1) |
Gene: LEUM_0104: NADH peroxidase (EC 1.11.1.1) |
|
*
Pediococcus pentosaceus ATCC 25745 Site: position = -81 score = 4.65037 sequence = TTATAAGCGTTTTAAT Site: position = -66 score = 4.05633 sequence = TTGTAAGCGGTTCACA Gene: PEPE_1619: NADH peroxidase (EC 1.11.1.1) |
NADH peroxidase (EC 1.11.1.1) |
| CRON 68. | ||||||||||||||||
| lrgA |
|
*
Lactobacillus brevis ATCC 367 Site: position = -235 score = 4.36835 sequence = GTGTAAGCGTTTCCTT Gene: LVIS_0621: Antiholin-like protein LrgA |
|
|
|
|
|
Gene: lp_3254: Antiholin-like protein LrgA |
*
Lactobacillus reuteri JCM 1112 Site: position = -101 score = 4.37742 sequence = GTGAAAACGAATACAA Gene: LAR_0851: Antiholin-like protein LrgA |
|
|
|
|
|
*
Pediococcus pentosaceus ATCC 25745 Site: position = -88 score = 4.80568 sequence = GTGAAAGCGCTAACAT Gene: PEPE_0697: Antiholin-like protein LrgA |
Antiholin-like protein LrgA |
| lrgB |
|
Gene: LVIS_0620: LrgA-associated membrane protein LrgB |
|
|
|
|
|
Gene: lp_3255: LrgA-associated membrane protein LrgB |
Gene: LAR_0852: LrgA-associated membrane protein LrgB |
|
|
|
|
|
Gene: PEPE_0698: LrgA-associated membrane protein LrgB |
LrgA-associated membrane protein LrgB |
| CRON 69. | ||||||||||||||||
| sorD |
|
|
*
Lactobacillus casei ATCC 334 Site: position = -304 score = 4.07392 sequence = ATGTAACGGCTTATAT Gene: LSEI_2729: Sorbitol-6-phosphate 2-dehydrogenase (EC 1.1.1.140) |
|
|
|
|
*2
Lactobacillus plantarum WCFS1 Site: position = -130 score = 3.85002 sequence = ATAACAGCGCTTTTTA Site: position = -62 score = 4.3331 sequence = TAGATAGCGTTTACAG Gene: lp_3623: Sorbitol-6-phosphate 2-dehydrogenase (EC 1.1.1.140) Site: position = -61 score = 4.37435 sequence = ATGTATGCGCTTTCGT Gene: lp_3657: Sorbitol-6-phosphate 2-dehydrogenase (EC 1.1.1.140) |
|
*
Lactobacillus rhamnosus GG Site: position = -47 score = 4.35818 sequence = AAGAAAACGCTACCAT Gene: LGG_02722: Sorbitol-6-phosphate 2-dehydrogenase (EC 1.1.1.140) |
|
*
Lactobacillus salivarius subsp. salivarius UCC118 Site: position = -63 score = 4.26052 sequence = TTGTAACCGTTAACAC Gene: LSL_1894: Sorbitol-6-phosphate 2-dehydrogenase (EC 1.1.1.140) |
|
|
|
Sorbitol-6-phosphate 2-dehydrogenase (EC 1.1.1.140) |
| srlM |
|
|
3
Lactobacillus casei ATCC 334 Gene: LSEI_2726: Sorbitol operon transcription regulator Gene: LSEI_2725: Sorbitol operon transcription regulator Gene: LSEI_2728: Sorbitol operon transcription regulator |
|
|
|
|
2
Lactobacillus plantarum WCFS1 Gene: lp_3622: Sorbitol operon transcription regulator Gene: lp_3656: Sorbitol operon transcription regulator |
|
Gene: LGG_02721: Sorbitol operon transcription regulator |
|
Gene: LSL_1893: Sorbitol operon transcription regulator |
|
|
|
Sorbitol operon transcription regulator |
| srlR |
|
|
Gene: LSEI_2724: Glucitol operon activator protein |
|
|
|
|
2
Lactobacillus plantarum WCFS1 Gene: lp_3621: Glucitol operon activator protein Gene: lp_3655: Glucitol operon activator protein |
|
Gene: LGG_02720: Glucitol operon activator protein |
|
Gene: LSL_1892: Glucitol operon activator protein |
|
|
|
Glucitol operon activator protein |
| srlA |
|
|
Gene: LSEI_2723: Glucitol/sorbitol-specific PTS system, IIC component (EC 2.7.1.69) |
|
|
|
|
2
Lactobacillus plantarum WCFS1 Gene: lp_3620: Glucitol/sorbitol-specific PTS system, IIC component (EC 2.7.1.69) Gene: lp_3654: Glucitol/sorbitol-specific PTS system, IIC component (EC 2.7.1.69) |
|
Gene: LGG_02719: Glucitol/sorbitol-specific PTS system, IIC component (EC 2.7.1.69) |
|
Gene: LSL_1891: Glucitol/sorbitol-specific PTS system, IIC component (EC 2.7.1.69) |
|
|
|
Glucitol/sorbitol-specific PTS system, IIC component (EC 2.7.1.69) |
| srlE |
|
|
Gene: LSEI_2722: Glucitol/sorbitol-specific PTS system, IIBC components (EC 2.7.1.69) |
|
|
|
|
2
Lactobacillus plantarum WCFS1 Gene: lp_3619: Glucitol/sorbitol-specific PTS system, IIBC components (EC 2.7.1.69) Gene: lp_3653: Glucitol/sorbitol-specific PTS system, IIBC components (EC 2.7.1.69) |
|
Gene: LGG_02718: Glucitol/sorbitol-specific PTS system, IIBC components (EC 2.7.1.69) |
|
Gene: LSL_1890: Glucitol/sorbitol-specific PTS system, IIBC components (EC 2.7.1.69) |
|
|
|
Glucitol/sorbitol-specific PTS system, IIBC components (EC 2.7.1.69) |
| srlB |
|
|
Gene: LSEI_2721: Glucitol/sorbitol-specific PTS system, IIA component (EC 2.7.1.69) |
|
|
|
|
2
Lactobacillus plantarum WCFS1 Gene: lp_3618: Glucitol/sorbitol-specific PTS system, IIA component (EC 2.7.1.69) Gene: lp_3652: Glucitol/sorbitol-specific PTS system, IIA component (EC 2.7.1.69) |
|
Gene: LGG_02717: Glucitol/sorbitol-specific PTS system, IIA component (EC 2.7.1.69) |
|
Gene: LSL_1889: Glucitol/sorbitol-specific PTS system, IIA component (EC 2.7.1.69) |
|
|
|
Glucitol/sorbitol-specific PTS system, IIA component (EC 2.7.1.69) |
| CRON 70. | ||||||||||||||||
| spxB |
*
Lactobacillus acidophilus NCFM Site: position = -110 score = 4.35587 sequence = GAAAAAGCGGTTTCAT Site: position = -78 score = 3.96286 sequence = AAGATAGCGTTTTGAA Gene: LBA1974: Pyruvate oxidase (EC 1.2.3.3) |
*
Lactobacillus brevis ATCC 367 Site: position = -152 score = 4.29849 sequence = TTGAAAGCGTGAACAA Gene: LVIS_0313: Pyruvate oxidase (EC 1.2.3.3) |
*2
Lactobacillus casei ATCC 334 Gene: LSEI_2143: Pyruvate oxidase (EC 1.2.3.3) Site: position = -149 score = 3.98501 sequence = GTTTAAGCGTTTTATA Site: position = -92 score = 4.39008 sequence = ATGAAAGGGCTTGCAT Gene: LSEI_1784: Pyruvate oxidase (EC 1.2.3.3) |
*
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 Site: position = -76 score = 4.04942 sequence = TTGATAGCACTTGCAA Gene: LBUL_2034: Pyruvate oxidase (EC 1.2.3.3) |
|
|
*
Lactobacillus johnsonii NCC 533 Site: position = -79 score = 4.1406 sequence = CAGCAACCGCTTTCAA Gene: LJ1853: Pyruvate oxidase (EC 1.2.3.3) |
*3
Lactobacillus plantarum WCFS1 Site: position = -41 score = 4.10574 sequence = ACGAAAACGTATACAA Gene: lp_2629: Pyruvate oxidase (EC 1.2.3.3) Site: position = -77 score = 4.26582 sequence = ATGTAAGCGTTTGCTG Gene: lp_3589: Pyruvate oxidase (EC 1.2.3.3) Site: position = -390 score = 4.33607 sequence = ATGTAAGCGTCATCAT Site: position = -86 score = 4.94355 sequence = ATAAAAGCGTTTACAT Gene: lp_0849: Pyruvate oxidase (EC 1.2.3.3) |
|
*2
Lactobacillus rhamnosus GG Site: position = -136 score = 4.563 sequence = ATTAAAGCGCTTTCCT Site: position = -89 score = 4.0824 sequence = GTGAAAGGGTTTGCAT Gene: LGG_01836: Pyruvate oxidase (EC 1.2.3.3) Gene: LGG_02145: Pyruvate oxidase (EC 1.2.3.3) |
*2
Lactobacillus sakei subsp. sakei 23K Site: position = -89 score = 4.83044 sequence = TTGTAATCGATTTCAA Gene: LSA1188: Pyruvate oxidase (EC 1.2.3.3) Site: position = -71 score = 4.12706 sequence = TTTGTAACGCTTACAA Gene: LSA1830: Pyruvate oxidase (EC 1.2.3.3) |
*2
Lactobacillus salivarius subsp. salivarius UCC118 Site: position = -53 score = 4.61303 sequence = AAGAAAACGTTTGCAA Gene: LSL_1372: Pyruvate oxidase (EC 1.2.3.3) Gene: LSL_0014: Pyruvate oxidase (EC 1.2.3.3) |
*
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 Site: position = -45 score = 5.39938 sequence = ATGAAAGCGCTTACAA Gene: LEUM_0977: Pyruvate oxidase (EC 1.2.3.3) |
|
*2
Pediococcus pentosaceus ATCC 25745 Gene: PEPE_0639: Pyruvate oxidase (EC 1.2.3.3) Site: position = -38 score = 4.60893 sequence = ACGAAAACGTTTTCAA Gene: PEPE_1252: Pyruvate oxidase (EC 1.2.3.3) |
Pyruvate oxidase (EC 1.2.3.3) |
| CRON 71. | ||||||||||||||||
| fucR |
|
|
|
|
|
|
|
*
Lactobacillus plantarum WCFS1 Site: position = -279 score = 4.93913 sequence = TTGTAAGCGCATACAT Site: position = -189 score = 3.87509 sequence = TAGTAATCGGTAAAAA Gene: lp_3598: L-fucose utilization transcriptional regulator FucR, DeoR family |
|
*
Lactobacillus rhamnosus GG Site: position = -58 score = 4.47601 sequence = TTGCAAGCGCTTACGA Gene: LGG_02680: L-fucose utilization transcriptional regulator FucR, DeoR family |
|
|
|
|
|
L-fucose utilization transcriptional regulator FucR, DeoR family |
| CRON 72. | ||||||||||||||||
| fucI |
|
|
|
|
|
|
|
|
|
*
Lactobacillus rhamnosus GG Site: position = -87 score = 4.74945 sequence = ATGAAAGCGCTTATTA Gene: LGG_02685: L-fucose isomerase (EC 5.3.1.25) |
|
|
|
|
|
L-fucose isomerase (EC 5.3.1.25) |
| fucK |
|
|
|
|
|
|
|
|
|
Gene: LGG_02684: L-fuculokinase (EC 2.7.1.51) |
|
|
|
|
|
L-fuculokinase (EC 2.7.1.51) |
| fucT |
|
|
|
|
|
|
|
|
|
Gene: LGG_02683: Predicted fucose transporter |
|
|
|
|
|
Predicted fucose transporter |
| fucU |
|
|
|
|
|
|
|
|
|
Gene: LGG_02682: L-fucose mutarotase (EC 5.1.3.n2) |
|
|
|
|
|
L-fucose mutarotase (EC 5.1.3.n2) |
| CRON 73. | ||||||||||||||||
| malT |
|
*
Lactobacillus brevis ATCC 367 Site: position = -71 score = 4.22369 sequence = ATGAAAGCGGTGCCAT Gene: LVIS_0357: Predicted maltose/maltodextrin permease |
|
|
Gene: LAF_0024: Predicted maltose/maltodextrin permease |
|
|
*
Lactobacillus plantarum WCFS1 Site: position = -65 score = 5.01831 sequence = TTGAAAGCGGTTTTAT Gene: lp_1729: Predicted maltose/maltodextrin permease |
Gene: LAR_0051: Predicted maltose/maltodextrin permease |
|
|
*
Lactobacillus salivarius subsp. salivarius UCC118 Site: position = -59 score = 4.47098 sequence = AAGAATGCGATTTCAT Gene: LSL_1282: Predicted maltose/maltodextrin permease |
*2
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 Site: position = -41 score = 5.04626 sequence = ATGTAAACGGTTACAA Gene: LEUM_0893: Predicted maltose/maltodextrin permease Site: position = -140 score = 4.63093 sequence = ATATAAACGGTTACAT Gene: LEUM_0994: Predicted maltose/maltodextrin permease |
|
*
Pediococcus pentosaceus ATCC 25745 Site: position = -39 score = 4.4434 sequence = ATGAAAGCGCTTCATA Gene: PEPE_0968: Predicted maltose/maltodextrin permease |
Predicted maltose/maltodextrin permease |
| galM |
|
|
|
|
|
|
|
Gene: lp_1731: Aldose 1-epimerase |
|
|
|
Gene: LSL_1281: Aldose 1-epimerase |
Gene: LEUM_0996: Aldose 1-epimerase |
|
|
Aldose 1-epimerase |
| mapA |
*
Lactobacillus acidophilus NCFM Site: position = -74 score = 4.36303 sequence = TGTAAACCGCTTTCAA Site: position = -48 score = 4.62635 sequence = ATGAAAGCGTAAACAA Gene: LBA1870: Maltose phosphorylase (EC 2.4.1.8) / Trehalose phosphorylase (EC 2.4.1.64) |
Gene: LVIS_0358: Maltose phosphorylase (EC 2.4.1.8) / Trehalose phosphorylase (EC 2.4.1.64) |
*
Lactobacillus casei ATCC 334 Site: position = -127 score = 4.46752 sequence = ATGATAGCGGTAACAT Gene: LSEI_0982: Maltose phosphorylase (EC 2.4.1.8) / Trehalose phosphorylase (EC 2.4.1.64) |
|
Gene: LAF_0025: Maltose phosphorylase (EC 2.4.1.8) / Trehalose phosphorylase (EC 2.4.1.64) |
*
Lactobacillus helveticus DPC 4571 Site: position = -76 score = 4.36303 sequence = TGTAAACCGCTTTCAA Gene: lhv_2000: Maltose phosphorylase (EC 2.4.1.8) / Trehalose phosphorylase (EC 2.4.1.64) |
*
Lactobacillus johnsonii NCC 533 Site: position = -70 score = 4.47331 sequence = TGTTAAGCGCTTTCAA Gene: LJ0213: Maltose phosphorylase (EC 2.4.1.8) / Trehalose phosphorylase (EC 2.4.1.64) |
Gene: lp_1730: Maltose phosphorylase (EC 2.4.1.8) / Trehalose phosphorylase (EC 2.4.1.64) |
Gene: LAR_0052: Maltose phosphorylase (EC 2.4.1.8) / Trehalose phosphorylase (EC 2.4.1.64) |
Gene: LGG_00945: Maltose phosphorylase (EC 2.4.1.8) / Trehalose phosphorylase (EC 2.4.1.64) |
|
Gene: LSL_1280: Maltose phosphorylase (EC 2.4.1.8) / Trehalose phosphorylase (EC 2.4.1.64) |
2
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 Gene: LEUM_0894: Maltose phosphorylase (EC 2.4.1.8) / Trehalose phosphorylase (EC 2.4.1.64) Gene: LEUM_0995: Maltose phosphorylase (EC 2.4.1.8) / Trehalose phosphorylase (EC 2.4.1.64) |
|
Gene: PEPE_0967: Maltose phosphorylase (EC 2.4.1.8) / Trehalose phosphorylase (EC 2.4.1.64) |
Maltose phosphorylase (EC 2.4.1.8) / Trehalose phosphorylase (EC 2.4.1.64) |
| pgmB |
Gene: LBA1869: Beta-phosphoglucomutase (EC 5.4.2.6) |
|
Gene: LSEI_0983: Beta-phosphoglucomutase (EC 5.4.2.6) |
|
Gene: LAF_0026: Beta-phosphoglucomutase (EC 5.4.2.6) |
Gene: lhv_1999: Beta-phosphoglucomutase (EC 5.4.2.6) |
Gene: LJ0214: Beta-phosphoglucomutase (EC 5.4.2.6) |
|
Gene: LAR_0053: Beta-phosphoglucomutase (EC 5.4.2.6) |
Gene: LGG_00946: Beta-phosphoglucomutase (EC 5.4.2.6) |
|
Gene: LSL_1279: Beta-phosphoglucomutase (EC 5.4.2.6) |
2
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 Gene: LEUM_0895: Beta-phosphoglucomutase (EC 5.4.2.6) Gene: LEUM_0997: Beta-phosphoglucomutase (EC 5.4.2.6) |
|
Gene: PEPE_0966: Beta-phosphoglucomutase (EC 5.4.2.6) |
Beta-phosphoglucomutase (EC 5.4.2.6) |
| CRON 74. | ||||||||||||||||
| malX |
|
|
|
|
|
|
|
*
Lactobacillus plantarum WCFS1 Site: position = -101 score = 3.97554 sequence = CTGTTAACGTTAACAT Gene: lp_0175: Maltose/maltodextrin ABC transporter, substrate-binding protein |
|
|
|
|
|
|
|
Maltose/maltodextrin ABC transporter, substrate-binding protein |
| malC |
|
|
|
|
|
|
|
Gene: lp_0176: Maltose/maltodextrin ABC transporter, permease protein 1 |
|
|
|
|
|
|
|
Maltose/maltodextrin ABC transporter, permease protein 1 |
| malD |
|
|
|
|
|
|
|
Gene: lp_0177: Maltose/maltodextrin ABC transporter, permease protein 2 |
|
|
|
|
|
|
|
Maltose/maltodextrin ABC transporter, permease protein 2 |
| malA |
|
|
|
|
|
|
|
Gene: lp_0178: Maltodextrose utilization protein MalA |
|
|
|
|
|
|
|
Maltodextrose utilization protein MalA |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |