Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of CcpA in Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293

Properties
Regulator type: Transcription factor
TF locus tag: LEUM_0544
Regulator family: LacI
Regulation mode:
Biological process: Carbon catabolism
Effector: HPr, phosphocarrier protein; Fructose-1,6-bisphosphate
Regulog: CcpA - Lactobacillaceae
Statistics of regulated genes:
- Genes 77
- Operons 32
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 561 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function
Position: -52
Score: 5.1
Sequence: TAGTAAGCGCTTACAT
Locus tag: LEUM_1245
Name: xynT
Funciton: Na+/xyloside symporter
LEUM_1245
xynT
Na+/xyloside symporter
Position: -107
Score: 4.1
Sequence: TTGTATACTGTTTCAT
Locus tag: LEUM_1881
Name: coaA
Funciton: Pantothenate kinase (EC 2.7.1.33)
LEUM_1881
coaA
Pantothenate kinase (EC 2.7.1.33)
Position: -45
Score: 5.4
Sequence: ATGAAAGCGCTTACAA
Locus tag: LEUM_0977
Name: spxB
Funciton: Pyruvate oxidase (EC 1.2.3.3)
LEUM_0977
spxB
Pyruvate oxidase (EC 1.2.3.3)
Position: -76
Score: 5.1
Sequence: ATGGAAGCGTTTTCAA
Locus tag: LEUM_0795
Name: rbsR
Funciton: Ribose operon transcriptional regulator, LacI family
Locus tag: LEUM_0794
Name: rbsK
Funciton: Ribokinase (EC 2.7.1.15)
Locus tag: LEUM_0793
Name: rpiA
Funciton: Ribose 5-phosphate isomerase A (EC 5.3.1.6)
LEUM_0795
rbsR
Ribose operon transcriptional regulator, LacI family
LEUM_0794
rbsK
Ribokinase (EC 2.7.1.15)
LEUM_0793
rpiA
Ribose 5-phosphate isomerase A (EC 5.3.1.6)
Position: -53
Score: 5.1
Sequence: ATGAAAGCGCTTACTA
Locus tag: LEUM_0880
Name: lacS
Funciton: Lactose and galactose permease
LEUM_0880
lacS
Lactose and galactose permease
Position: -92
Score: 4.3
Sequence: AAGTAAACGTTTACTG
Position: -60
Score: 4.2
Sequence: TTGTAAACGTTTACGC
Locus tag: LEUM_0828
Name: nplT
Funciton: Neopullulanase (EC 3.2.1.135)
Locus tag: LEUM_0827
Name: malT2
Funciton: Predicted maltose/maltodextrin permease
LEUM_0828
nplT
Neopullulanase (EC 3.2.1.135)
LEUM_0827
malT2
Predicted maltose/maltodextrin permease
Position: -100
Score: 4.7
Sequence: ATGTAAACGGTAACAA
Position: -75
Score: 5.4
Sequence: TTGAAAGCGTTTACAA
Locus tag: LEUM_1768
Name: manL
Funciton: Mannose-specific PTS system, IIAB component (EC 2.7.1.69)
Locus tag: LEUM_1767
Name: manM
Funciton: Mannose-specific PTS system, IIC component (EC 2.7.1.69)
Locus tag: LEUM_1766
Name: manN
Funciton: Mannose-specific PTS system, IID component (EC 2.7.1.69)
Locus tag: LEUM_1765
Name: manO
Funciton: Predicted regulator of the mannose operon, ManO
LEUM_1768
manL
Mannose-specific PTS system, IIAB component (EC 2.7.1.69)
LEUM_1767
manM
Mannose-specific PTS system, IIC component (EC 2.7.1.69)
LEUM_1766
manN
Mannose-specific PTS system, IID component (EC 2.7.1.69)
LEUM_1765
manO
Predicted regulator of the mannose operon, ManO
Position: -37
Score: 5
Sequence: TTGTAACCGATTTCAT
Locus tag: LEUM_0355
Name: pgi
Funciton: Glucose-6-phosphate isomerase (EC 5.3.1.9)
LEUM_0355
pgi
Glucose-6-phosphate isomerase (EC 5.3.1.9)
Position: -72
Score: 4.8
Sequence: ATGTAAGCGGTTACTT
Locus tag: LEUM_0898
Name: malT2
Funciton: Predicted maltose/maltodextrin permease
Locus tag: LEUM_0899
Name: nplT
Funciton: Neopullulanase (EC 3.2.1.135)
LEUM_0898
malT2
Predicted maltose/maltodextrin permease
LEUM_0899
nplT
Neopullulanase (EC 3.2.1.135)
Position: -16
Score: 3.8
Sequence: AAGAAAGAGGTTAAAA
Locus tag: LEUM_1919
Name: adhA
Funciton: Alcohol dehydrogenase, Zn-dependent (EC 1.1.1.1)
LEUM_1919
adhA
Alcohol dehydrogenase, Zn-dependent (EC 1.1.1.1)
Position: -62
Score: 4.5
Sequence: TTGTGAACGTTTTCAT
Locus tag: LEUM_1571
Name: ndk
Funciton: Nucleoside diphosphate kinase (EC 2.7.4.6)
LEUM_1571
ndk
Nucleoside diphosphate kinase (EC 2.7.4.6)
Position: -104
Score: 5
Sequence: TTGTAAGCGTTTCCAA
Locus tag: LEUM_0852
Name: araA
Funciton: L-arabinose isomerase (EC 5.3.1.4)
Locus tag: LEUM_0853
Name: araE
Funciton: Arabinose-proton symporter
Locus tag: LEUM_0854
Name: araB
Funciton: Ribulokinase (EC 2.7.1.16)
Locus tag: LEUM_0855
Name: araD
Funciton: L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4)
LEUM_0852
araA
L-arabinose isomerase (EC 5.3.1.4)
LEUM_0853
araE
Arabinose-proton symporter
LEUM_0854
araB
Ribulokinase (EC 2.7.1.16)
LEUM_0855
araD
L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4)
Position: 29
Score: 4.4
Sequence: GAGAAAACGCTTAAAA
Locus tag: LEUM_2039
Name: LEUM_2039
Funciton: Predicted transcriptional regulator of FeS culster biosynthesis, XRE family
Locus tag: LEUM_2038
Name: sufC
Funciton: Iron-sulfur cluster assembly ATPase protein
Locus tag: LEUM_2037
Name: sufD
Funciton: Iron-sulfur cluster assembly protein
Locus tag: LEUM_2036
Name: sufS
Funciton: Cysteine desulfurase (EC 2.8.1.7), SufS subfamily
Locus tag: LEUM_2035
Name: sufA
Funciton: Fe-S cluster formation protein, NifU-like
Locus tag: LEUM_2034
Name: sufB
Funciton: Fe-S cluster assembly ABC-type transport system, permease component
LEUM_2039
LEUM_2039
Predicted transcriptional regulator of FeS culster biosynthesis, XRE family
LEUM_2038
sufC
Iron-sulfur cluster assembly ATPase protein
LEUM_2037
sufD
Iron-sulfur cluster assembly protein
LEUM_2036
sufS
Cysteine desulfurase (EC 2.8.1.7), SufS subfamily
LEUM_2035
sufA
Fe-S cluster formation protein, NifU-like
LEUM_2034
sufB
Fe-S cluster assembly ABC-type transport system, permease component
Position: -147
Score: 4.6
Sequence: ATGATAGCGCTTCCAA
Locus tag: LEUM_1311
Name: galM
Funciton: Aldose 1-epimerase (EC 5.1.3.3); Galactose mutarotase and related enzymes
LEUM_1311
galM
Aldose 1-epimerase (EC 5.1.3.3); Galactose mutarotase and related enzymes
Position: -85
Score: 5
Sequence: ATGCAAGCGCTTACAT
Locus tag: LEUM_1273
Name: fmpA
Funciton: Predicted mannose specific PTS system, IIA component
Locus tag: LEUM_1272
Name: fmpB
Funciton: Predicted mannose specific PTS system, IIB component
Locus tag: LEUM_1271
Name: fmpC
Funciton: Predicted mannose specific PTS system, IIC component
Locus tag: LEUM_1270
Name: fmpD
Funciton: Predicted mannose specific PTS system,
Locus tag: LEUM_1269
Name: fmpE
Funciton: Predicted mannose specific PTS system, putative EII component
LEUM_1273
fmpA
Predicted mannose specific PTS system, IIA component
LEUM_1272
fmpB
Predicted mannose specific PTS system, IIB component
LEUM_1271
fmpC
Predicted mannose specific PTS system, IIC component
LEUM_1270
fmpD
Predicted mannose specific PTS system,
LEUM_1269
fmpE
Predicted mannose specific PTS system, putative EII component
Position: -169
Score: 4.6
Sequence: GTGAAACCGTTATCAT
Locus tag: LEUM_0775
Name: pyk
Funciton: Pyruvate kinase (EC 2.7.1.40)
LEUM_0775
pyk
Pyruvate kinase (EC 2.7.1.40)
Position: -80
Score: 4.5
Sequence: CTGTAAGCGCTTCCAT
Locus tag: LEUM_1064
Name: lacZ
Funciton: Beta-galactosidase (EC 3.2.1.23)
Locus tag: LEUM_1065
Name: lacS
Funciton: Lactose and galactose permease, GPH translocator family
LEUM_1064
lacZ
Beta-galactosidase (EC 3.2.1.23)
LEUM_1065
lacS
Lactose and galactose permease, GPH translocator family
Position: -124
Score: 4.9
Sequence: TTGCAAACGCTTACAA
Position: -102
Score: 4.2
Sequence: TTATAAGTGTTTTCAT
Locus tag: LEUM_0543
Name: pepQ
Funciton: Xaa-Pro dipeptidase (EC 3.4.13.9)
LEUM_0543
pepQ
Xaa-Pro dipeptidase (EC 3.4.13.9)
Position: -157
Score: 5.3
Sequence: ATGTAAACGTTTTCAT
Position: -63
Score: 4.7
Sequence: TTGTAAGCGCTTTGAT
Locus tag: LEUM_1780
Name: ptsH
Funciton: Phosphotransferase system, HPr-related protein
Locus tag: LEUM_1779
Name: ptsI
Funciton: Phosphoenolpyruvate-protein kinase, PTS system component (EC 2.7.3.9)
LEUM_1780
ptsH
Phosphotransferase system, HPr-related protein
LEUM_1779
ptsI
Phosphoenolpyruvate-protein kinase, PTS system component (EC 2.7.3.9)
Position: -76
Score: 5.1
Sequence: TTGGAAGCGTTTACAA
Locus tag: LEUM_0499
Name: LVIS_0438
Funciton: Hypothetical protein
Locus tag: LEUM_0500
Name: LVIS_0439
Funciton: Sugar phosphate isomerase/epimerase
Locus tag: LEUM_0501
Name: LVIS_0440
Funciton: H+/gluconate symporter related permease
Locus tag: LEUM_0502
Name: LVIS_0441
Funciton: 2-dehydro-3-deoxygluconokinase
LEUM_0499
LVIS_0438
Hypothetical protein
LEUM_0500
LVIS_0439
Sugar phosphate isomerase/epimerase
LEUM_0501
LVIS_0440
H+/gluconate symporter related permease
LEUM_0502
LVIS_0441
2-dehydro-3-deoxygluconokinase
Position: -77
Score: 4.8
Sequence: AGGTAAGCGTTTACAT
Locus tag: LEUM_1316
Name: null
Funciton: Beta-galactosidase (EC 3.2.1.23)
Locus tag: LEUM_1315
Name: yghZ
Funciton: Predicted oxidoreductase, aryl-alcohol dehydrogenase related
LEUM_1316
Beta-galactosidase (EC 3.2.1.23)
LEUM_1315
yghZ
Predicted oxidoreductase, aryl-alcohol dehydrogenase related
Position: -31
Score: 4.9
Sequence: GTGTAAGCGGTTACAA
Locus tag: LEUM_0736
Name: lplA1
Funciton: Lipoate-protein ligase A
Locus tag: LEUM_0737
Name: pdhA
Funciton: Dihydrolipoamide dehydrogenase complex (EC 1.8.1.4), E1 component alpha-subunit
Locus tag: LEUM_0738
Name: pdhB
Funciton: Dihydrolipoamide dehydrogenase complex (EC 1.8.1.4), E1 component beta-subunit
Locus tag: LEUM_0739
Name: pdhC
Funciton: Dihydrolipoamide dehydrogenase complex (EC 1.8.1.4), E2 component
Locus tag: LEUM_0740
Name: pdhD
Funciton: Dihydrolipoamide dehydrogenase complex (EC 1.8.1.4), E3 component
LEUM_0736
lplA1
Lipoate-protein ligase A
LEUM_0737
pdhA
Dihydrolipoamide dehydrogenase complex (EC 1.8.1.4), E1 component alpha-subunit
LEUM_0738
pdhB
Dihydrolipoamide dehydrogenase complex (EC 1.8.1.4), E1 component beta-subunit
LEUM_0739
pdhC
Dihydrolipoamide dehydrogenase complex (EC 1.8.1.4), E2 component
LEUM_0740
pdhD
Dihydrolipoamide dehydrogenase complex (EC 1.8.1.4), E3 component
Position: -86
Score: 5.1
Sequence: TTGTAACCGTTTACAT
Locus tag: LEUM_0507
Name: treP
Funciton: Trehalose-specific PTS system, EIIABC component (EC 2.7.1.69)
Locus tag: LEUM_0508
Name: treP
Funciton: Trehalose-specific PTS system, EIIABC component (EC 2.7.1.69)
Locus tag: LEUM_0509
Name: treA
Funciton: Trehalose-6-phosphate hydrolase (EC 3.2.1.93)
LEUM_0507
treP
Trehalose-specific PTS system, EIIABC component (EC 2.7.1.69)
LEUM_0508
treP
Trehalose-specific PTS system, EIIABC component (EC 2.7.1.69)
LEUM_0509
treA
Trehalose-6-phosphate hydrolase (EC 3.2.1.93)
Position: -114
Score: 4.4
Sequence: ATGAAAACACTTATAA
Position: -92
Score: 4.9
Sequence: TTGTAAGCGTTTGCAA
Locus tag: LEUM_0544
Name: ccpA
Funciton: Carbon catabolism global transcriptional regulator CcpA, LacI family
LEUM_0544
ccpA
Carbon catabolism global transcriptional regulator CcpA, LacI family
Position: -140
Score: 4.6
Sequence: ATATAAACGGTTACAT
Locus tag: LEUM_0994
Name: malT
Funciton: Predicted maltose/maltodextrin permease
Locus tag: LEUM_0995
Name: mapA
Funciton: Maltose phosphorylase (EC 2.4.1.8) / Trehalose phosphorylase (EC 2.4.1.64)
Locus tag: LEUM_0996
Name: galM
Funciton: Aldose 1-epimerase
Locus tag: LEUM_0997
Name: pgmB
Funciton: Beta-phosphoglucomutase (EC 5.4.2.6)
LEUM_0994
malT
Predicted maltose/maltodextrin permease
LEUM_0995
mapA
Maltose phosphorylase (EC 2.4.1.8) / Trehalose phosphorylase (EC 2.4.1.64)
LEUM_0996
galM
Aldose 1-epimerase
LEUM_0997
pgmB
Beta-phosphoglucomutase (EC 5.4.2.6)
Position: -41
Score: 5
Sequence: ATGTAAACGGTTACAA
Locus tag: LEUM_0893
Name: malT
Funciton: Predicted maltose/maltodextrin permease
Locus tag: LEUM_0894
Name: mapA
Funciton: Maltose phosphorylase (EC 2.4.1.8) / Trehalose phosphorylase (EC 2.4.1.64)
Locus tag: LEUM_0895
Name: pgmB
Funciton: Beta-phosphoglucomutase (EC 5.4.2.6)
LEUM_0893
malT
Predicted maltose/maltodextrin permease
LEUM_0894
mapA
Maltose phosphorylase (EC 2.4.1.8) / Trehalose phosphorylase (EC 2.4.1.64)
LEUM_0895
pgmB
Beta-phosphoglucomutase (EC 5.4.2.6)
Position: -53
Score: 4.9
Sequence: ATGTAAGCGCATACAT
Position: -19
Score: 4.1
Sequence: TAGAAAGGGTTTAAAT
Locus tag: LEUM_1998
Name: ulaG
Funciton: Probable L-ascorbate-6-phosphate lactonase UlaG (EC 3.1.1.-) (L-ascorbate utilization protein G)
Locus tag: LEUM_1997
Name: ulaC
Funciton: Ascorbate-specific PTS system, EIIA component (EC 2.7.1.-)
Locus tag: LEUM_1996
Name: ulaA
Funciton: Ascorbate-specific PTS system, EIIC component
Locus tag: LEUM_1995
Name: ulaB
Funciton: Ascorbate-specific PTS system, EIIB component (EC 2.7.1.69)
Locus tag: LEUM_1994
Name: ulaD
Funciton: 3-keto-L-gulonate 6-phosphate decarboxylase (EC 4.1.1.85)
LEUM_1998
ulaG
Probable L-ascorbate-6-phosphate lactonase UlaG (EC 3.1.1.-) (L-ascorbate utilization protein G)
LEUM_1997
ulaC
Ascorbate-specific PTS system, EIIA component (EC 2.7.1.-)
LEUM_1996
ulaA
Ascorbate-specific PTS system, EIIC component
LEUM_1995
ulaB
Ascorbate-specific PTS system, EIIB component (EC 2.7.1.69)
LEUM_1994
ulaD
3-keto-L-gulonate 6-phosphate decarboxylase (EC 4.1.1.85)
Position: -83
Score: 5
Sequence: ATGAAAGCGTATACAA
Locus tag: LEUM_0130
Name: xylA
Funciton: Xylose isomerase (EC 5.3.1.5)
Locus tag: LEUM_0131
Name: xylB
Funciton: Xylulose kinase (EC 2.7.1.17)
LEUM_0130
xylA
Xylose isomerase (EC 5.3.1.5)
LEUM_0131
xylB
Xylulose kinase (EC 2.7.1.17)
Position: -77
Score: 4.7
Sequence: AAGTAACCGTTTACAT
Locus tag: LEUM_0882
Name: melA
Funciton: Alpha-galactosidase (EC 3.2.1.22)
Locus tag: LEUM_0883
Name: galK
Funciton: Galactokinase (EC 2.7.1.6)
Locus tag: LEUM_0884
Name: galT
Funciton: Galactose-1-phosphate uridylyltransferase (EC 2.7.7.10)
LEUM_0882
melA
Alpha-galactosidase (EC 3.2.1.22)
LEUM_0883
galK
Galactokinase (EC 2.7.1.6)
LEUM_0884
galT
Galactose-1-phosphate uridylyltransferase (EC 2.7.7.10)
Position: -66
Score: 5.3
Sequence: TTGTAAACGCTTACAT
Locus tag: LEUM_1314
Name: lacS
Funciton: Lactose and galactose permease, GPH translocator family
Locus tag: LEUM_1313
Name: galK
Funciton: Galactokinase (EC 2.7.1.6)
LEUM_1314
lacS
Lactose and galactose permease, GPH translocator family
LEUM_1313
galK
Galactokinase (EC 2.7.1.6)
Position: -292
Score: 3.9
Sequence: TTTCAAGCGCTTCAAT
Locus tag: LEUM_1392
Name: glpF2
Funciton: Glycerol uptake facilitator protein
LEUM_1392
glpF2
Glycerol uptake facilitator protein
Position: -137
Score: 4.1
Sequence: ATGATAATGTTTTCAT
Position: -54
Score: 4.4
Sequence: GTGGAACCGGTTACAA
Locus tag: LEUM_0383
Name: scrT
Funciton: Predicted sucrose permease
Locus tag: LEUM_0384
Name: scrP
Funciton: Sucrose phosphorylase (EC 2.4.1.7)
LEUM_0383
scrT
Predicted sucrose permease
LEUM_0384
scrP
Sucrose phosphorylase (EC 2.4.1.7)
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