Regulog PflR - Lactobacillaceae
| Regulator type: | Transcription factor |
| Regulator family: | DeoR |
| Regulation mode: | repressor |
| Biological process: | Formate metabolism |
| Effector: | |
| Phylum: | Firmicutes |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Lactobacillaceae
- By TF family - DeoR
- By pathway - Formate metabolism
| Genome | Genes | Operons |
|---|---|---|
| Lactobacillus acidophilus NCFM | ||
| Lactobacillus brevis ATCC 367 | ||
| Lactobacillus casei ATCC 334 | ||
| Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 | ||
| Lactobacillus fermentum IFO 3956 | ||
| Lactobacillus helveticus DPC 4571 | ||
| Lactobacillus johnsonii NCC 533 | ||
| Lactobacillus plantarum WCFS1 | 3 | 3 |
| Lactobacillus reuteri JCM 1112 | ||
| Lactobacillus rhamnosus GG | ||
| Lactobacillus sakei subsp. sakei 23K | ||
| Lactobacillus salivarius subsp. salivarius UCC118 | ||
| Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 | ||
| Oenococcus oeni PSU-1 | ||
| Pediococcus pentosaceus ATCC 25745 |
| Genes | Function | |||||||||||||||
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| CRON 1. | ||||||||||||||||
| pflR |
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Lactobacillus plantarum WCFS1 Site: position = -69 score = 5.37535 sequence = TAATTTCAAACGAAAGTA Gene: lp_2597: Pyruvate-formate lyase operon transcriptional regulator, DeoR family |
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Pyruvate-formate lyase operon transcriptional regulator, DeoR family |
| CRON 2. | ||||||||||||||||
| pflB |
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Lactobacillus plantarum WCFS1 Site: position = -47 score = 5.74359 sequence = TTATTACGTAAGAAAGTC Gene: lp_2598: Pyruvate formate-lyase (EC 2.3.1.54) |
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Pyruvate formate-lyase (EC 2.3.1.54) |
| CRON 3. | ||||||||||||||||
| pflA |
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Lactobacillus plantarum WCFS1 Site: position = -84 score = 5.73267 sequence = TACTTTCGTTTGAAATTA Gene: lp_2596: Pyruvate formate-lyase activating enzyme (EC 1.97.1.4) |
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Pyruvate formate-lyase activating enzyme (EC 1.97.1.4) |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |