Regulon of HrcA in Lactobacillus johnsonii NCC 533

Properties
Regulator type:	Transcription factor
TF locus tag:	LJ1481
Regulator family:	HrcA
Regulation mode:	repressor
Biological process:	Heat shock response
Effector:	Heat shock
Regulog:	HrcA - Lactobacillaceae
Statistics of regulated genes:
- Genes	10
- Operons	6
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 69 sites [see more]

Member of regulog collections

By taxonomy - Lactobacillaceae
By trascription factor - HrcA
By TF family - HrcA
By effector - Heat shock
By pathway - Heat shock response

Regulated operons
	Locus Tag	Name	Function
Position: -91 Score: 6.4 Sequence: TTAGCACTCTACTTGAACAATTGCTAA Position: -43 Score: 6.3 Sequence: TTAGCACAGAAGAAAGAAGAGTGCTAA Locus tag: LJ1481 Name: hrcA Funciton: Heat shock response transcriptional regulator HrcA, HrcA family Locus tag: LJ1480 Name: grpE Funciton: Heat shock protein GrpE Locus tag: LJ1479 Name: dnaK Funciton: Chaperone protein DnaK Locus tag: LJ1478 Name: dnaJ Funciton: Chaperone protein DnaJ
	LJ1481	hrcA	Heat shock response transcriptional regulator HrcA, HrcA family
	LJ1480	grpE	Heat shock protein GrpE
	LJ1479	dnaK	Chaperone protein DnaK
	LJ1478	dnaJ	Chaperone protein DnaJ
Position: -70 Score: 7.6 Sequence: TTAGCACTCATATATCAAGAGTGCTAA Locus tag: LJ0815 Name: clpL Funciton: ATP-dependent Clp protease, ATP-binding subunit
	LJ0815	clpL	ATP-dependent Clp protease, ATP-binding subunit
Position: -155 Score: 6.9 Sequence: TTAGCACTCTGATGATAAAAGTGCTAA Position: -70 Score: 7 Sequence: TTAGCACTTATAATATATGAGTGCTAA Locus tag: LJ0460 Name: groS Funciton: Heat shock protein 60 family co-chaperone GroES Locus tag: LJ0461 Name: groL Funciton: Heat shock protein 60 family chaperone GroEL
	LJ0460	groS	Heat shock protein 60 family co-chaperone GroES
	LJ0461	groL	Heat shock protein 60 family chaperone GroEL
Position: -58 Score: 6.7 Sequence: TTAGCACTTATAACTTATGAGTGCTAA Locus tag: LJ1775 Name: clpC Funciton: ATP-dependent Clp protease ATP-binding subunit ClpA
	LJ1775	clpC	ATP-dependent Clp protease ATP-binding subunit ClpA
Position: -78 Score: 5.9 Sequence: TTAGCACCGTTCTAATTAGTGTGCTAA Locus tag: LJ0181 Name: hsp Funciton: Small heat shock protein
	LJ0181	hsp	Small heat shock protein
Position: -49 Score: 6.9 Sequence: TTAGCACTGTACTTATTAGAGTGCTAA Locus tag: LJ0869 Name: clpP Funciton: ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92)
	LJ0869	clpP	ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92)

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD