Regulon of NagR in Lactobacillus acidophilus NCFM

Properties
Regulator type:	Transcription factor
TF locus tag:	LBA0516
Regulator family:	GntR/Others
Regulation mode:
Biological process:	N-acetylglucosamine utilization
Effector:	N-acetylglucosamine-6-phosphate
Regulog:	NagR - Lactobacillaceae
Statistics of regulated genes:
- Genes	8
- Operons	7
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 79 sites [see more]

Member of regulog collections

By taxonomy - Lactobacillaceae
By TF family - GntR/Others
By effector - N-acetylglucosamine-6-phosphate
By pathway - N-acetylglucosamine utilization

Regulated operons
	Locus Tag	Name	Function
Position: -80 Score: 5.2 Sequence: AAACTGGTATTGACCAATTT Locus tag: LBA0144 Name: nagA2 Funciton: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25)
	LBA0144	nagA2	N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25)
Position: -95 Score: 5.2 Sequence: AAATTGGTCAATACCAGTTT Locus tag: LBA0143 Name: LBA0143 Funciton: Maltodextrin glucosidase (EC 3.2.1.20)
	LBA0143	LBA0143	Maltodextrin glucosidase (EC 3.2.1.20)
Position: -102 Score: 5.4 Sequence: TTAATGGTCTAGTCCATTAT Position: -82 Score: 5.6 Sequence: AAAATGGAATAGACCATTTT Locus tag: LBA1947 Name: PF00248 Funciton: Oxidoreductase, aldo/keto reductase family
	LBA1947	PF00248	Oxidoreductase, aldo/keto reductase family
Position: -60 Score: 4.9 Sequence: ATAGAGGTATATACCGAATT Locus tag: LBA0491 Name: celB Funciton: PTS system, cellobiose-specific IIC component (EC 2.7.1.69) Locus tag: LBA0492 Name: null Funciton: hypothetical protein
	LBA0491	celB	PTS system, cellobiose-specific IIC component (EC 2.7.1.69)
	LBA0492		hypothetical protein
Position: -66 Score: 4.4 Sequence: AATGAAATCTAGACCAATTT Locus tag: LBA0516 Name: nagR Funciton: Transcriptional regulator of N-Acetylglucosamine utilization, GntR family
	LBA0516	nagR	Transcriptional regulator of N-Acetylglucosamine utilization, GntR family
Position: -52 Score: 4.4 Sequence: AAAATAAACTAGTCCATTAA Position: -28 Score: 4.6 Sequence: ATATTGAACTAGACCAAAGG Locus tag: LBA0462 Name: glmS Funciton: Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16)
	LBA0462	glmS	Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16)
Position: -57 Score: 5.6 Sequence: AAAATGGTCTATTCCATTTT Position: -37 Score: 5.4 Sequence: ATAATGGACTAGACCATTAA Locus tag: LBA1948 Name: nagB Funciton: Glucosamine-6-phosphate deaminase (EC 3.5.99.6)
	LBA1948	nagB	Glucosamine-6-phosphate deaminase (EC 3.5.99.6)

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD