Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Profile of regulator NagR in Lactobacillaceae

Properties
Regulator family: GntR/Others
Regulation mode:
Biological process: N-acetylglucosamine utilization
Effector: N-acetylglucosamine-6-phosphate
Regulog: NagR - Lactobacillaceae
Member of regulog collections
Transcription factor binding sites
Locus Tag Name Position Score Sequence
Lactobacillus acidophilus NCFM
LBA0516 nagR -66 4.4 AATGAAATCTAGACCAATTT
LBA0462 glmS -52 4.4 AAAATAAACTAGTCCATTAA
LBA0462 glmS -28 4.6 ATATTGAACTAGACCAAAGG
LBA1948 nagB -57 5.6 AAAATGGTCTATTCCATTTT
LBA1948 nagB -37 5.4 ATAATGGACTAGACCATTAA
LBA0491 celB -60 4.9 ATAGAGGTATATACCGAATT
LBA1947 PF00248 -102 5.4 TTAATGGTCTAGTCCATTAT
LBA1947 PF00248 -82 5.6 AAAATGGAATAGACCATTTT
LBA0143 LBA0143 -95 5.2 AAATTGGTCAATACCAGTTT
LBA0144 nagA2 -80 5.2 AAACTGGTATTGACCAATTT
Lactobacillus brevis ATCC 367
LVIS_0539 nagA -66 5.3 TTTCTGGTCTATACCGATTA
LVIS_1312 pgi -82 5.1 AATGTGGACTAGACCATTTA
LVIS_1312 pgi -43 4.5 ATAATGGACTAGTCAATAAT
LVIS_0687 glmS -106 5.3 ATTTCAGTCTATACCAATTT
LVIS_0689 nagB -58 5.4 AAATCGGTCTAGATCATTTA
LVIS_0689 nagB -38 5 CAATTGGACTATACCATTAG
Lactobacillus casei ATCC 334
LSEI_1808 nagA -73 5.3 ATCTTGGTCTATACCAGTTA
LSEI_1019 glmS -159 5.3 AAATTAATATAGACCAATAT
LSEI_1019 glmS -48 5.2 AAATCTGTCTAAACCAATTT
LSEI_2889 nagB -77 5 ATTACGGTATAGACCACTAT
LSEI_2889 nagB -34 5.1 ACATTGGACTAGACCAGATA
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365
LBUL_2010 nagB -92 4.5 TTATCGGTCTAGACCTTGAC
LBUL_2010 nagB -53 5.7 AAAATGGACTATACCAATAT
LBUL_0440 glmS -29 4.7 AAATTGAACTAGACCAAAGG
LBUL_2009 PF00248 -166 5.7 ATATTGGTATAGTCCATTTT
LBUL_2009 PF00248 -127 4.5 GTCAAGGTCTAGACCGATAA
LBUL_0170 LBA0143 -85 4.6 AAACTGGTATAGGCTATTTT
Lactobacillus fermentum IFO 3956
LAF_0382 glmS -47 4.9 GAATTTATCTATACCAATTT
Lactobacillus helveticus DPC 4571
lhv_0534 nagR -35 4.5 AATGCAATCTAGACCAATTT
lhv_2077 nagB -54 5.6 AAAATGGTCTATTCCATTTT
lhv_2077 nagB -34 5.3 ATAATGGACTAGACCAGTAA
lhv_0491 glmS -131 4.9 AAAATTGATTATACCAATTT
lhv_2076 PF00248 -103 5.3 TTACTGGTCTAGTCCATTAT
lhv_2076 PF00248 -83 5.6 AAAATGGAATAGACCATTTT
Lactobacillus johnsonii NCC 533
LJ1581 glmS -130 5.1 CTTTTGATATAGACCAATTA
LJ1581 glmS -29 4.4 TAAATGAACTATACCAAAGG
LJ0531 null -64 5.8 AAATAGGTATATACCAATTA
LJ1822 PF00248 -109 5.4 TCATTGGTCTAGTCCATTAT
LJ1822 PF00248 -81 5.4 AAATTGGTCTAGTCAAATTA
LJ1823 nagB -65 5.4 TAATTTGACTAGACCAATTT
LJ1823 nagB -37 5.4 ATAATGGACTAGACCAATGA
Lactobacillus plantarum WCFS1
lp_0562 nagA -55 5.2 AGTTTGGTCTATACCGATTA
lp_0822 glmS -213 4.1 AGGTTAGACTAGACCAATTG
lp_2531 nagE -100 4.2 ACATTGGTCTATACACTTAG
lp_2969 nagE -97 5 CCAATGGACTATACCAATAA
lp_0226 nagB -60 5.4 ATTTTAGTCTAGACCAATAT
lp_0226 nagB -39 4.8 CAATTGGACTATACCAAACA
Lactobacillus reuteri JCM 1112
LAR_0271 nagR -82 4.2 AAATTGGTCTAGATTTTTGG
LAR_0405 glmS -134 4.4 TAAATCATATAGACCAATCT
LAR_0405 glmS -43 4.4 CTAGTTATCTATACCAATTT
Lactobacillus rhamnosus GG
LGG_01862 nagA -66 4.5 AGTCTGGTCTATACCGGTTA
LGG_02913 nagB -78 5.1 AATTAGGTATAGACCATTGT
LGG_02913 nagB -35 5.3 ATATTGGACTAGACCAGATA
LGG_00983 glmS -47 4.8 AAACCTGTCTAAACCAATTT
Lactobacillus sakei subsp. sakei 23K
LSA1588 nagA -56 5.7 TTTTTGGTCTATACCATTTA
LSA1355 glmS -137 4 ACTCAGGGCTATACCAATGT
LSA1355 glmS -114 5.4 TAATTGAAATATACCAATAA
LSA0060 nagE -150 5.3 TATACGGTATAGACCAAAAT
LSA0060 nagE -95 5.1 TTAAAGGTCTATACCAACTA
LSA0417 nagB -55 5.2 TAATTGGACTATACCAATGG
Lactobacillus salivarius subsp. salivarius UCC118
LSL_1466 nagA -146 5.5 GTTTTGGTCTATACCAATTA
LSL_1466 nagA -93 5.2 TTCATGGTCTATACCATTTA
LSL_1627 glmS -58 5.1 ATCAAGGTCTATACCAATTT
LSL_1465 nagB -92 5.2 TAAATGGTATAGACCATGAA
LSL_1465 nagB -39 5.5 TAATTGGTATAGACCAAAAC
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293
LEUM_0425 nagA -82 5.8 TAATAGGTCTAGACCAATTA
LEUM_0354 nagB -50 5.4 ATATTGGTATAGACCAAAAC
LEUM_0354 nagB -35 5.8 AAAACGGTATAGACCAATTT
Oenococcus oeni PSU-1
OEOE_1728 nagA -32 4.4 TAATTGGGCTATACCAAACC
OEOE_0644 nagB -84 4.2 CAAAAAAACTATACCAATTT
OEOE_0635 glmS -113 5 TTAATGGCCTATACCAATGT
Pediococcus pentosaceus ATCC 25745
PEPE_1528 nagA -57 5.6 TTTTTGGTCTATACCGATAT
PEPE_0478 glmS -124 5 CATTTGATATATACCGATTT
PEPE_0478 glmS -58 4 ATCGTTCTATATACCAATTT
PEPE_0335 nagB -60 5.4 ATTTTGGTTTAGACCATTTT
PEPE_0335 nagB -39 5.6 TAATTGGACTATACCAAAAA
PEPE_1816 nagE -144 5.8 TAATAGGTATATACCAATTT
PEPE_1816 nagE -100 4.8 AAAGCGGATTATACCAATAA
PEPE_0023 celB2 -165 5.6 TAATTGGTATATTCCATTAT
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