Regulon of TPP in Lactobacillus reuteri JCM 1112

Properties
Regulator type:	RNA regulatory element
Name:	TPP
RFAM:	RF00059
Regulation mode:
Biological process:	Thiamine biosynthesis
Effector:	Thiamine pyrophosphate
Regulog:	TPP - Lactobacillaceae
Under regulation:
- Genes	7
- Operons	3

Member of regulog collections

By taxonomy - Lactobacillaceae
By RNA motif - TPP
By effector - Thiamine pyrophosphate
By pathway - Thiamine biosynthesis

Regulated operons
	Locus Tag	Name	Function
Position: -156 Score: 71.9 Sequence: GAATAAATCTGGGGT... Locus tag: LAR_1550 Name: ykoE Funciton: Substrate-specific component YkoE of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine Locus tag: LAR_1551 Name: ykoD Funciton: Duplicated ATPase component YkoD of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine Locus tag: LAR_1552 Name: ykoC Funciton: Transmembrane component YkoC of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
	LAR_1550	ykoE	Substrate-specific component YkoE of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
	LAR_1551	ykoD	Duplicated ATPase component YkoD of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
	LAR_1552	ykoC	Transmembrane component YkoC of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
Position: -182 Score: 59.3 Sequence: TTGCATAAACGGGGA... Locus tag: LAR_1494 Name: cytX Funciton: Predicted hydroxymethylpyrimidine transporter CytX
	LAR_1494	cytX	Predicted hydroxymethylpyrimidine transporter CytX
Position: -162 Score: 54.3 Sequence: TATTGCATTAGGGGT... Locus tag: LAR_0968 Name: thiM Funciton: Hydroxyethylthiazole kinase (EC 2.7.1.50) Locus tag: LAR_0969 Name: thiD Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7) Locus tag: LAR_0970 Name: thiE Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
	LAR_0968	thiM	Hydroxyethylthiazole kinase (EC 2.7.1.50)
	LAR_0969	thiD	Phosphomethylpyrimidine kinase (EC 2.7.4.7)
	LAR_0970	thiE	Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD