Regulon of TPP in Lactobacillus casei ATCC 334

Properties
Regulator type:	RNA regulatory element
Name:	TPP
RFAM:	RF00059
Regulation mode:
Biological process:	Thiamine biosynthesis
Effector:	Thiamine pyrophosphate
Regulog:	TPP - Lactobacillaceae
Under regulation:
- Genes	9
- Operons	2

Member of regulog collections

By taxonomy - Lactobacillaceae
By RNA motif - TPP
By effector - Thiamine pyrophosphate
By pathway - Thiamine biosynthesis

Regulated operons
	Locus Tag	Name	Function
Position: -141 Score: 61.4 Sequence: AACCTTCACAAAGGG... Locus tag: LSEI_1757 Name: thiT Funciton: Core component YuaJ of predicted thiamin ECF transporter
	LSEI_1757	thiT	Core component YuaJ of predicted thiamin ECF transporter
Position: -245 Score: 68.2 Sequence: AGAAACATTTGGGGT... Locus tag: LSEI_0294 Name: ykoE Funciton: Substrate-specific component YkoE of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine Locus tag: LSEI_0295 Name: ykoD Funciton: Duplicated ATPase component YkoD of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine Locus tag: LSEI_0296 Name: ykoC Funciton: Transmembrane component YkoC of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine Locus tag: LSEI_0297 Name: tenA Funciton: Thiaminase II (EC 3.5.99.2) Locus tag: LSEI_0298 Name: thiW Funciton: Substrate-specific component ThiW of predicted thiazole ECF transporter Locus tag: LSEI_0299 Name: thiM Funciton: Hydroxyethylthiazole kinase (EC 2.7.1.50) Locus tag: LSEI_0300 Name: thiE Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) Locus tag: LSEI_0301 Name: thiD Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7)
	LSEI_0294	ykoE	Substrate-specific component YkoE of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
	LSEI_0295	ykoD	Duplicated ATPase component YkoD of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
	LSEI_0296	ykoC	Transmembrane component YkoC of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
	LSEI_0297	tenA	Thiaminase II (EC 3.5.99.2)
	LSEI_0298	thiW	Substrate-specific component ThiW of predicted thiazole ECF transporter
	LSEI_0299	thiM	Hydroxyethylthiazole kinase (EC 2.7.1.50)
	LSEI_0300	thiE	Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
	LSEI_0301	thiD	Phosphomethylpyrimidine kinase (EC 2.7.4.7)

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD