Regulon of T-box(Trp) in Lactobacillus casei ATCC 334
| Regulator type: | RNA regulatory element |
| Name: | T-box |
| RFAM: | RF00230 |
| Regulation mode: | |
| Biological process: | Amino acid metabolism |
| Effector: | Trp-tRNA |
| Regulog: | T-box(Trp) - Lactobacillaceae |
| Under regulation: | |
| - Genes | 7 |
| - Operons | 3 |
Member of regulog collections
- By taxonomy - Lactobacillaceae
- By RNA motif - T-box
- By effector - Trp-tRNA
- By pathway - Amino acid metabolism
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -468
Score: 97.1 Sequence: GAACAAACCGATGAT...
Locus tag: LSEI_0078
Name: trpD Funciton: Anthranilate phosphoribosyltransferase (EC 2.4.2.18)
Locus tag: LSEI_0077
Name: trpC Funciton: Indole-3-glycerol phosphate synthase (EC 4.1.1.48)
Locus tag: LSEI_0076
Name: trpF Funciton: Phosphoribosylanthranilate isomerase (EC 5.3.1.24)
Locus tag: LSEI_0075
Name: trpB Funciton: Tryptophan synthase beta chain (EC 4.2.1.20)
Locus tag: LSEI_0074
Name: trpA Funciton: Tryptophan synthase alpha chain (EC 4.2.1.20) |
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trpD
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Anthranilate phosphoribosyltransferase (EC 2.4.2.18)
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trpC
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Indole-3-glycerol phosphate synthase (EC 4.1.1.48)
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trpF
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Phosphoribosylanthranilate isomerase (EC 5.3.1.24)
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trpB
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Tryptophan synthase beta chain (EC 4.2.1.20)
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trpA
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Tryptophan synthase alpha chain (EC 4.2.1.20)
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Position: -350
Score: 72.8 Sequence: TATTCACACAAACGA...
Locus tag: LSEI_2624
Name: trpS Funciton: Tryptophanyl-tRNA synthetase (EC 6.1.1.2) ## type 2 |
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trpS
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Tryptophanyl-tRNA synthetase (EC 6.1.1.2) ## type 2
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Position: -416
Score: 89.9 Sequence: ATGCAAACCTTTGAA...
Locus tag: LSEI_2797
Name: oppA Funciton: Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1) |
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oppA
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Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |