Regulon of PerR in Lactobacillus sakei subsp. sakei 23K
| Regulator type: | Transcription factor |
| TF locus tag: | LSA0109 |
| Regulator family: | FUR |
| Regulation mode: | repressor |
| Biological process: | Manganese homeostasis; Oxidative stress response; Iron homeostasis |
| Effector: | Iron ion, (Fe2+); Manganese ion, (Mn2+); Hydrogen peroxide |
| Regulog: | PerR - Lactobacillaceae |
| Statistics of regulated genes: | |
| - Genes | 5 |
| - Operons | 4 |
| Visualization: | |
|
Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Lactobacillaceae
- By TF family - FUR
- By effector - Iron ion, (Fe2+)
- By effector - Manganese ion, (Mn2+)
- By effector - Hydrogen peroxide
- By pathway - Manganese homeostasis
- By pathway - Oxidative stress response
- By pathway - Iron homeostasis
| Locus Tag | Name | Function | |
|---|---|---|---|
|
Position: -38
Score: 4.7 Sequence: TGATAATGATTATCA
Locus tag: LSA0466
Name: perR Funciton: Peroxide stress response transcriptional regulator PerR, Fur family |
|||
|
perR
|
Peroxide stress response transcriptional regulator PerR, Fur family
|
||
|
Position: -61
Score: 5 Sequence: TTGTAATAATTATTA
Locus tag: LSA0575
Name: npr Funciton: NADH peroxidase (EC 1.11.1.1) |
|||
|
npr
|
NADH peroxidase (EC 1.11.1.1)
|
||
|
Position: -43
Score: 5.6 Sequence: TTATAATGGTTATAA
Locus tag: LSA1194
Name: pcl2 Funciton: Predicted membrane protein
Locus tag: LSA1195
Name: pcl1 Funciton: Predicted membrane protein |
|||
|
pcl2
|
Predicted membrane protein
|
||
|
pcl1
|
Predicted membrane protein
|
||
|
Position: -65
Score: 5.3 Sequence: TGATAATAATTCTAA
Locus tag: LSA0969
Name: cadA Funciton: Predicted cation-transporting ATP-ase |
|||
|
cadA
|
Predicted cation-transporting ATP-ase
|
||
|
Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |